RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C CCH1P50077 2039 aa2.88□□□□□ -1.95
ATG3YNR007C ARG3P05150 338 aa2.87□□□□□ -1.95
ATG3YNR007C SPT15P13393 240 aaKnown RBP2.87□□□□□ -1.95
ATG3YNR007C CKA1P15790 372 aa2.87□□□□□ -1.95
ATG3YNR007C EST1P17214 699 aaPredicted RBP2.87□□□□□ -1.95
ATG3YNR007C ARF2P19146 181 aaKnown RBP2.87□□□□□ -1.95
ATG3YNR007C KGD1P20967 1014 aaKnown RBP2.87□□□□□ -1.95
ATG3YNR007C DAL81P21657 970 aa2.87□□□□□ -1.95
ATG3YNR007C MNE1P24720 663 aa2.87□□□□□ -1.95
ATG3YNR007C BUD14P27637 709 aa2.87□□□□□ -1.95
ATG3YNR007C SNC1P31109 117 aa2.87□□□□□ -1.95
ATG3YNR007C MRE11P32829 692 aa2.87□□□□□ -1.95
ATG3YNR007C MRP4P32902 394 aa2.87□□□□□ -1.95
ATG3YNR007C TIF3P34167 436 aaKnown RBP2.87□□□□□ -1.95
ATG3YNR007C BLI1P35727 113 aa2.87□□□□□ -1.95
ATG3YNR007C SRX1P36077 127 aa2.87□□□□□ -1.95
ATG3YNR007C KAP104P38217 918 aaKnown RBP2.87□□□□□ -1.95
ATG3YNR007C SWC5P38326 303 aa2.87□□□□□ -1.95
ATG3YNR007C LAG1P38703 411 aa2.87□□□□□ -1.95
ATG3YNR007C ANS1P38832 159 aa2.87□□□□□ -1.95
ATG3YNR007C YHR218WP38899 603 aa2.87□□□□□ -1.95
ATG3YNR007C ALK1P43633 760 aaKnown RBP2.87□□□□□ -1.95
ATG3YNR007C LCL3P53153 274 aa2.87□□□□□ -1.95
ATG3YNR007C YGR111WP53265 400 aa2.87□□□□□ -1.95
ATG3YNR007C PRM1P53835 661 aa2.87□□□□□ -1.95
ATG3YNR007C VPS9P54787 451 aa2.87□□□□□ -1.95
ATG3YNR007C RSM23Q01163 450 aa2.87□□□□□ -1.95
ATG3YNR007C YMR160WQ03823 816 aa2.87□□□□□ -1.95
ATG3YNR007C TAF11Q04226 346 aa2.87□□□□□ -1.95
ATG3YNR007C YDL218WQ07629 317 aa2.87□□□□□ -1.95
ATG3YNR007C SIL1Q08199 421 aa2.87□□□□□ -1.95
ATG3YNR007C SEC39Q12745 709 aa2.87□□□□□ -1.95
ATG3YNR007C EFG1Q3E705 233 aaKnown RBP2.87□□□□□ -1.95
ATG3YNR007C MDM35O60200 86 aa2.86□□□□□ -1.95
ATG3YNR007C YKR104WP0CE69 306 aa2.86□□□□□ -1.95
ATG3YNR007C BRF1P29056 596 aa2.86□□□□□ -1.95
ATG3YNR007C PAP1P29468 568 aaKnown RBP2.86□□□□□ -1.95
ATG3YNR007C WBP1P33767 430 aaKnown RBP2.86□□□□□ -1.95
ATG3YNR007C MTR2P34232 184 aaKnown RBP2.86□□□□□ -1.95
ATG3YNR007C MAK5P38112 773 aaPredicted RBP2.86□□□□□ -1.95
ATG3YNR007C SRO77P38163 1010 aa2.86□□□□□ -1.95
ATG3YNR007C SIF2P38262 535 aa2.86□□□□□ -1.95
ATG3YNR007C YPT35P38815 214 aaKnown RBP2.86□□□□□ -1.95
ATG3YNR007C YIL060WP40519 144 aa2.86□□□□□ -1.95
ATG3YNR007C AZF1P41696 914 aa2.86□□□□□ -1.95
ATG3YNR007C DIM1P41819 318 aaKnown RBP2.86□□□□□ -1.95
ATG3YNR007C RPS10BP46784 105 aaKnown RBP2.86□□□□□ -1.95
ATG3YNR007C IMD4P50094 524 aaKnown RBP2.86□□□□□ -1.95
ATG3YNR007C TWF1P53250 332 aa2.86□□□□□ -1.95
ATG3YNR007C YGR126WP53274 230 aa2.86□□□□□ -1.95
ATG3YNR007C YPL113CQ02961 396 aa2.86□□□□□ -1.95
ATG3YNR007C PIR3Q03180 325 aa2.86□□□□□ -1.95
ATG3YNR007C ENT5Q03769 411 aaKnown RBP2.86□□□□□ -1.95
ATG3YNR007C INP2Q03824 705 aa2.86□□□□□ -1.95
ATG3YNR007C YPR114WQ06107 315 aa2.86□□□□□ -1.95
ATG3YNR007C SSK1Q07084 712 aa2.86□□□□□ -1.95
ATG3YNR007C LDB18Q07887 179 aa2.86□□□□□ -1.95
ATG3YNR007C RPS10AQ08745 105 aaPredicted RBP2.86□□□□□ -1.95
ATG3YNR007C RDR1Q08904 546 aa2.86□□□□□ -1.95
ATG3YNR007C PGC1Q08959 321 aa2.86□□□□□ -1.95
ATG3YNR007C BRR1Q99177 341 aaPredicted RBP2.86□□□□□ -1.95
ATG3YNR007C SUC2P00724 532 aa2.85□□□□□ -1.95
ATG3YNR007C RED1P14291 827 aa2.85□□□□□ -1.95
ATG3YNR007C CBS2P14905 389 aa2.85□□□□□ -1.95
ATG3YNR007C ROX1P25042 368 aa2.85□□□□□ -1.95
ATG3YNR007C SNT1P25357 1226 aa2.85□□□□□ -1.95
ATG3YNR007C DBF4P32325 704 aa2.85□□□□□ -1.95
ATG3YNR007C NFU1P32860 256 aa2.85□□□□□ -1.95
ATG3YNR007C SEC66P33754 206 aa2.85□□□□□ -1.95
ATG3YNR007C PEX5P35056 612 aa2.85□□□□□ -1.95
ATG3YNR007C YET1P35723 206 aa2.85□□□□□ -1.95
ATG3YNR007C MIC60P36112 540 aa2.85□□□□□ -1.95
ATG3YNR007C ROT2P38138 954 aa2.85□□□□□ -1.95
ATG3YNR007C RRP3P38712 501 aaKnown RBP2.85□□□□□ -1.95
ATG3YNR007C OTU2P38747 307 aaKnown RBP2.85□□□□□ -1.95
ATG3YNR007C LRP1P38801 184 aaKnown RBP2.85□□□□□ -1.95
ATG3YNR007C YHR210CP38893 341 aa2.85□□□□□ -1.95
ATG3YNR007C YEL057CP39983 233 aa2.85□□□□□ -1.95
ATG3YNR007C EDC3P39998 551 aaKnown RBP2.85□□□□□ -1.95
ATG3YNR007C MET18P40469 1032 aa2.85□□□□□ -1.95
ATG3YNR007C YIL054WP40524 105 aa2.85□□□□□ -1.95
ATG3YNR007C DLD2P46681 530 aaKnown RBP2.85□□□□□ -1.95
ATG3YNR007C IPI3P53877 555 aa2.85□□□□□ -1.95
ATG3YNR007C YNL143CP53908 130 aa2.85□□□□□ -1.95
ATG3YNR007C KTR6P54070 446 aa2.85□□□□□ -1.95
ATG3YNR007C MSC1Q03104 513 aa2.85□□□□□ -1.95
ATG3YNR007C RLI1Q03195 608 aaKnown RBP2.85□□□□□ -1.95
ATG3YNR007C IVY1Q04934 453 aa2.85□□□□□ -1.95
ATG3YNR007C BNA5Q05979 453 aa2.85□□□□□ -1.95
ATG3YNR007C KAP95Q06142 861 aaKnown RBP2.85□□□□□ -1.95
ATG3YNR007C YLR456WQ06199 204 aa2.85□□□□□ -1.95
ATG3YNR007C ATG29Q12092 213 aa2.85□□□□□ -1.95
ATG3YNR007C RLM1Q12224 676 aa2.85□□□□□ -1.95
ATG3YNR007C GPM3Q12326 303 aa2.85□□□□□ -1.95
ATG3YNR007C EMP46Q12396 444 aa2.85□□□□□ -1.95
ATG3YNR007C YOR338WQ99326 363 aa2.85□□□□□ -1.95
ATG3YNR007C PAB1P04147 577 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
ATG3YNR007C SCH9P11792 824 aaKnown RBP2.84□□□□□ -1.95
ATG3YNR007C MRP13P12686 339 aa2.84□□□□□ -1.95
ATG3YNR007C PEP5P12868 1029 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms