RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C RIM13Q03792 727 aa8.2□□□□□ -1.1
RPD3YNL330C ARO10Q06408 635 aa8.2□□□□□ -1.1
RPD3YNL330C BMT6Q12291 365 aa8.2□□□□□ -1.1
RPD3YNL330C BBP1Q12365 385 aa8.2□□□□□ -1.1
RPD3YNL330C SIR3P06701 978 aa8.19□□□□□ -1.1
RPD3YNL330C IDH2P28241 369 aaKnown RBP8.19□□□□□ -1.1
RPD3YNL330C ASF2P32448 525 aaPredicted RBP8.19□□□□□ -1.1
RPD3YNL330C LHP1P33399 275 aaKnown RBP8.19□□□□□ -1.1
RPD3YNL330C SCO2P38072 301 aa8.19□□□□□ -1.1
RPD3YNL330C MBA1P38300 278 aa8.19□□□□□ -1.1
RPD3YNL330C YHR177WP38867 453 aa8.19□□□□□ -1.1
RPD3YNL330C GGC1P38988 300 aa8.19□□□□□ -1.1
RPD3YNL330C FET5P43561 622 aa8.19□□□□□ -1.1
RPD3YNL330C DIE2P50076 525 aa8.19□□□□□ -1.1
RPD3YNL330C FLC3P53121 802 aa8.19□□□□□ -1.1
RPD3YNL330C TIM11P81449 96 aaPredicted RBP8.19□□□□□ -1.1
RPD3YNL330C AAT1Q01802 451 aa8.19□□□□□ -1.1
RPD3YNL330C MRPL13Q02204 264 aa8.19□□□□□ -1.1
RPD3YNL330C PUN1Q06991 263 aa8.19□□□□□ -1.1
RPD3YNL330C PEX27Q08580 376 aa8.19□□□□□ -1.1
RPD3YNL330C YPL066WQ12194 479 aa8.19□□□□□ -1.1
RPD3YNL330C PDE2P06776 526 aa8.18□□□□□ -1.1
RPD3YNL330C RPS21AP0C0V8 87 aaKnown RBP8.18□□□□□ -1.1
RPD3YNL330C TAH1P25638 111 aaPredicted RBP8.18□□□□□ -1.1
RPD3YNL330C PET309P32522 965 aaPredicted RBP8.18□□□□□ -1.1
RPD3YNL330C PET112P33893 541 aa8.18□□□□□ -1.1
RPD3YNL330C ZRT3P34240 503 aa8.18□□□□□ -1.1
RPD3YNL330C UTP30P36144 274 aaKnown RBP8.18□□□□□ -1.1
RPD3YNL330C NVJ1P38881 321 aa8.18□□□□□ -1.1
RPD3YNL330C AXL2P38928 823 aa8.18□□□□□ -1.1
RPD3YNL330C GDI1P39958 451 aaKnown RBP8.18□□□□□ -1.1
RPD3YNL330C QDR2P40474 542 aa8.18□□□□□ -1.1
RPD3YNL330C PSA1P41940 361 aaKnown RBP8.18□□□□□ -1.1
RPD3YNL330C VEL1P53058 206 aa8.18□□□□□ -1.1
RPD3YNL330C SDT1P53078 280 aa8.18□□□□□ -1.1
RPD3YNL330C MRH4P53166 561 aa8.18□□□□□ -1.1
RPD3YNL330C SCW11P53189 542 aa8.18□□□□□ -1.1
RPD3YNL330C YNR065CP53751 1116 aa8.18□□□□□ -1.1
RPD3YNL330C DUS1P53759 423 aaKnown RBP8.18□□□□□ -1.1
RPD3YNL330C NOG1Q02892 647 aaKnown RBP8.18□□□□□ -1.1
RPD3YNL330C SNZ1Q03148 297 aa8.18□□□□□ -1.1
RPD3YNL330C NSE5Q03718 556 aa8.18□□□□□ -1.1
RPD3YNL330C FIN1Q03898 291 aa8.18□□□□□ -1.1
RPD3YNL330C YMR087WQ04299 284 aa8.18□□□□□ -1.1
RPD3YNL330C TFB4Q12004 338 aa8.18□□□□□ -1.1
RPD3YNL330C HAL9Q12180 1030 aa8.18□□□□□ -1.1
RPD3YNL330C HTS1P07263 546 aaKnown RBP8.17□□□□□ -1.1
RPD3YNL330C KIN3P22209 435 aa8.17□□□□□ -1.1
RPD3YNL330C YJU3P28321 313 aa8.17□□□□□ -1.1
RPD3YNL330C YIM1P28625 365 aa8.17□□□□□ -1.1
RPD3YNL330C PET127P32606 800 aa8.17□□□□□ -1.1
RPD3YNL330C BIG1P38813 335 aa8.17□□□□□ -1.1
RPD3YNL330C LSB6P42951 607 aa8.17□□□□□ -1.1
RPD3YNL330C IRC7P43623 340 aa8.17□□□□□ -1.1
RPD3YNL330C YAE1P47118 141 aaPredicted RBP8.17□□□□□ -1.1
RPD3YNL330C LSG1P53145 640 aaKnown RBP8.17□□□□□ -1.1
RPD3YNL330C MPC1P53157 130 aaKnown RBP8.17□□□□□ -1.1
RPD3YNL330C KXD1P53158 218 aa8.17□□□□□ -1.1
RPD3YNL330C COG7P53195 279 aa8.17□□□□□ -1.1
RPD3YNL330C MKC7P53379 596 aa8.17□□□□□ -1.1
RPD3YNL330C YNR021WP53723 404 aaKnown RBP8.17□□□□□ -1.1
RPD3YNL330C YNL034WP53963 612 aa8.17□□□□□ -1.1
RPD3YNL330C YAT1P80235 687 aa8.17□□□□□ -1.1
RPD3YNL330C RGC1Q06108 1083 aaKnown RBP8.17□□□□□ -1.1
RPD3YNL330C YLR346CQ06139 101 aa8.17□□□□□ -1.1
RPD3YNL330C HTZ1Q12692 134 aaKnown RBP8.17□□□□□ -1.1
RPD3YNL330C SUS1Q6WNK7 96 aa8.17□□□□□ -1.1
RPD3YNL330C RPS17AP02407 136 aaKnown RBP8.16□□□□□ -1.1
RPD3YNL330C AI4P03878 556 aa8.16□□□□□ -1.1
RPD3YNL330C RPS17BP14127 136 aaKnown RBP8.16□□□□□ -1.1
RPD3YNL330C SAR1P20606 190 aaKnown RBP8.16□□□□□ -1.1
RPD3YNL330C YSR3P23501 404 aa8.16□□□□□ -1.1
RPD3YNL330C NDC1P32500 655 aa8.16□□□□□ -1.1
RPD3YNL330C KAP122P32767 1081 aa8.16□□□□□ -1.1
RPD3YNL330C YPT7P32939 208 aa8.16□□□□□ -1.1
RPD3YNL330C YHR035WP38769 630 aa8.16□□□□□ -1.1
RPD3YNL330C APQ12P40532 138 aa8.16□□□□□ -1.1
RPD3YNL330C YKE4P40544 346 aa8.16□□□□□ -1.1
RPD3YNL330C YJL218WP40892 196 aaKnown RBP8.16□□□□□ -1.1
RPD3YNL330C PAC11P40960 533 aa8.16□□□□□ -1.1
RPD3YNL330C ERG10P41338 398 aaKnown RBP8.16□□□□□ -1.1
RPD3YNL330C HXT16P47185 567 aa8.16□□□□□ -1.1
RPD3YNL330C COS12P53053 380 aa8.16□□□□□ -1.1
RPD3YNL330C TUB4P53378 473 aa8.16□□□□□ -1.1
RPD3YNL330C MRPL50P53724 139 aa8.16□□□□□ -1.1
RPD3YNL330C BIO5P53744 561 aaKnown RBP8.16□□□□□ -1.1
RPD3YNL330C NBA1Q08229 501 aaKnown RBP8.16□□□□□ -1.1
RPD3YNL330C YPL199CQ08954 240 aa8.16□□□□□ -1.1
RPD3YNL330C YPR1Q12458 312 aa8.16□□□□□ -1.1
RPD3YNL330C PHO4P07270 312 aaKnown RBP8.15□□□□□ -1.1
RPD3YNL330C YCR016WP25617 290 aaKnown RBP8.15□□□□□ -1.1
RPD3YNL330C KKQ8P36004 724 aa8.15□□□□□ -1.1
RPD3YNL330C RSM22P36056 628 aa8.15□□□□□ -1.1
RPD3YNL330C SAF1P38352 637 aa8.15□□□□□ -1.1
RPD3YNL330C PTC2P39966 464 aaKnown RBP8.15□□□□□ -1.1
RPD3YNL330C ZRG8P40021 1076 aa8.15□□□□□ -1.1
RPD3YNL330C FMP10P40098 244 aa8.15□□□□□ -1.1
RPD3YNL330C FAU1P40099 211 aa8.15□□□□□ -1.1
RPD3YNL330C MAD2P40958 196 aa8.15□□□□□ -1.1
RPD3YNL330C SNM1P40993 198 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms