RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	FRE1	P32791	686 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	MRE11	P32829	692 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	DRE2	P36152	348 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	YHR210C	P38893	341 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	ALD5	P40047	520 aa	Known RBP	3.46	□□□□□ -1.86
TPM1	YNL079C	ROK1	P45818	564 aa	Predicted RBP	3.46	□□□□□ -1.86
TPM1	YNL079C	ASG7	P46993	209 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	TDA7	P53882	636 aa	Predicted RBP	3.46	□□□□□ -1.86
TPM1	YNL079C	ELP3	Q02908	557 aa	Known RBP	3.46	□□□□□ -1.86
TPM1	YNL079C	TAF9	Q05027	157 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	FMP45	Q07651	309 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	THI20	Q08224	551 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	DNL4	Q08387	944 aa	Predicted RBP	3.46	□□□□□ -1.86
TPM1	YNL079C	YOR365C	Q08844	703 aa		3.46	□□□□□ -1.86
TPM1	YNL079C	YPL225W	Q08971	146 aa	Known RBP	3.46	□□□□□ -1.86
TPM1	YNL079C	HSH49	Q99181	213 aa	Predicted RBP	3.46	□□□□□ -1.86
TPM1	YNL079C	ECM29	P38737	1868 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	CDC31	P06704	161 aa	Known RBP	3.45	□□□□□ -1.86
TPM1	YNL079C	IMA3	P0CW40	589 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	IMA4	P0CW41	589 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	VPS3	P23643	1011 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	RSA4	P25382	515 aa	Known RBP	3.45	□□□□□ -1.86
TPM1	YNL079C	URA7	P28274	579 aa	Known RBP	3.45	□□□□□ -1.86
TPM1	YNL079C	ERG1	P32476	496 aa	Known RBP	3.45	□□□□□ -1.86
TPM1	YNL079C	TRS65	P32893	560 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	HEL1	P36113	551 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	YBR032W	P38223	100 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	MUM2	P38236	366 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	YBR062C	P38239	180 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	YHL026C	P38740	315 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	BZZ1	P38822	633 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	AVT2	P39981	480 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	SCC4	P40090	624 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	ALK1	P43633	760 aa	Known RBP	3.45	□□□□□ -1.86
TPM1	YNL079C	PET130	P47065	347 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	AZR1	P50080	613 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	ALT2	P52892	507 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	MRPL19	P53875	158 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	KTR5	P53966	522 aa	Predicted RBP	3.45	□□□□□ -1.86
TPM1	YNL079C	SAM50	P53969	484 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	SLG1	P54867	378 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	ADA2	Q02336	434 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	GRS2	Q06817	618 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	IMA2	Q08295	589 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	YLL056C	Q12177	298 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	IZH4	Q99393	312 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	MOT1	P32333	1867 aa		3.45	□□□□□ -1.86
TPM1	YNL079C	TOM1	Q03280	3268 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	MET17	P06106	444 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	RAD52	P06778	471 aa	Known RBP	3.44	□□□□□ -1.86
TPM1	YNL079C	CKA1	P15790	372 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	PRP2	P20095	876 aa	Predicted RBP	3.44	□□□□□ -1.86
TPM1	YNL079C	HXT3	P32466	567 aa	Known RBP	3.44	□□□□□ -1.86
TPM1	YNL079C	NIP1	P32497	812 aa	Known RBP	3.44	□□□□□ -1.86
TPM1	YNL079C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.44	□□□□□ -1.86	not detected
TPM1	YNL079C	SHE3	P38272	425 aa	Known RBP	3.44	□□□□□ -1.86
TPM1	YNL079C	SMF2	P38778	549 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	UTP9	P38882	575 aa	Known RBP	3.44	□□□□□ -1.86
TPM1	YNL079C	TVP23	P38962	199 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	AIM22	P47051	409 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	YJR154W	P47181	346 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	SLT2	Q00772	484 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	YDR239C	Q03780	787 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	TAF11	Q04226	346 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	GLO2	Q05584	274 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	CMS1	Q07897	291 aa	Known RBP	3.44	□□□□□ -1.86
TPM1	YNL079C	YEH2	Q07950	538 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	THP1	Q08231	455 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	APC5	Q08683	685 aa		3.44	□□□□□ -1.86
TPM1	YNL079C	LAA1	P39526	2014 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	TEF1	P02994	458 aa	Known RBP	3.43	□□□□□ -1.86
TPM1	YNL079C	SSC1	P0CS90	654 aa	Known RBP	3.43	□□□□□ -1.86
TPM1	YNL079C	PMR1	P13586	950 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	PPZ1	P26570	692 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	RAD5	P32849	1169 aa	Predicted RBP	3.43	□□□□□ -1.86
TPM1	YNL079C	VPS17	P32913	551 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	CSE2	P33308	149 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	ECM15	P35195	104 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	ETR1	P38071	380 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	RIM2	P38127	377 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	TCM62	P38228	572 aa	Known RBP	3.43	□□□□□ -1.86
TPM1	YNL079C	MED8	P38304	223 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	YBP1	P38315	674 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	LIN1	P38852	340 aa	Predicted RBP	3.43	□□□□□ -1.86
TPM1	YNL079C	AIM18	P38884	321 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	MET18	P40469	1032 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	RRT5	P43607	289 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	LIA1	P47120	325 aa	Known RBP	3.43	□□□□□ -1.86
TPM1	YNL079C	TAF6	P53040	516 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	PEX31	P53203	462 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	TWF1	P53250	332 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	YMR087W	Q04299	284 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	SPC24	Q04477	213 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	CUE5	Q08412	411 aa	Known RBP	3.43	□□□□□ -1.86
TPM1	YNL079C	NRT1	Q08485	598 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	NDD1	Q08887	554 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	YLR053C	Q12026	108 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	PKH2	Q12236	1081 aa	Known RBP	3.43	□□□□□ -1.86
TPM1	YNL079C	GPM3	Q12326	303 aa		3.43	□□□□□ -1.86
TPM1	YNL079C	SEC39	Q12745	709 aa		3.43	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms