RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUS1	YMR240C	MTC6	P38849	526 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	YFL067W	P43537	175 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	TOS3	P43637	560 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	STE24	P47154	453 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	ECM7	Q06200	448 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	NOP6	Q07623	225 aa	Known RBP	4.16	□□□□□ -1.74
CUS1	YMR240C	AAD15	Q08361	143 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	YLR108C	Q12259	485 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	YMR230W-A	Q3E7B5	62 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	NBL1	Q3E7Y6	73 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	YCL021W-A	Q96VH3	125 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	SLM5	P25345	492 aa	Known RBP	4.15	□□□□□ -1.75
CUS1	YMR240C	YCL068C	P25593	260 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	MUD1	P32605	298 aa	Known RBP	4.15	□□□□□ -1.75
CUS1	YMR240C	TOA1	P32773	286 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	YBL028C	P38202	106 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	MEP2	P41948	499 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	PMT5	P52867	743 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	YNR068C	P53754	272 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	RRN11	Q04712	507 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	RAX1	Q08760	435 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	PSY3	Q12318	242 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	NCA2	Q12374	616 aa		4.15	□□□□□ -1.75
CUS1	YMR240C	OPI3	P05375	206 aa		4.14	□□□□□ -1.75
CUS1	YMR240C	ATP1	P07251	545 aa	Known RBP	4.14	□□□□□ -1.75
CUS1	YMR240C	ARF1	P11076	181 aa	Known RBP	4.14	□□□□□ -1.75
CUS1	YMR240C	SCH9	P11792	824 aa	Known RBP	4.14	□□□□□ -1.75
CUS1	YMR240C	SPP381	P38282	291 aa	Predicted RBP	4.14	□□□□□ -1.75
CUS1	YMR240C	JLP2	P40206	208 aa		4.14	□□□□□ -1.75
CUS1	YMR240C	RPA34	P47006	233 aa	Predicted RBP	4.14	□□□□□ -1.75
CUS1	YMR240C	YNL143C	P53908	130 aa		4.14	□□□□□ -1.75
CUS1	YMR240C	UTP6	Q02354	440 aa	Known RBP	4.14	□□□□□ -1.75
CUS1	YMR240C	ESA1	Q08649	445 aa		4.14	□□□□□ -1.75
CUS1	YMR240C	SFG1	Q12507	346 aa		4.14	□□□□□ -1.75
CUS1	YMR240C	RDS1	P25611	832 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	COX13	P32799	129 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	SKT5	P34226	696 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	YKL097C	P34245	136 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	DOA1	P36037	715 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	CHK1	P38147	527 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	ATM1	P40416	690 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	NAS2	P40555	220 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	YGR117C	P53270	476 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	PDR16	P53860	351 aa	Known RBP	4.13	□□□□□ -1.75
CUS1	YMR240C	YER078W-A	Q3E7A2	54 aa		4.13	□□□□□ -1.75
CUS1	YMR240C	TRX1	P22217	103 aa	Known RBP	4.12	□□□□□ -1.75
CUS1	YMR240C	YUR1	P26725	428 aa		4.12	□□□□□ -1.75
CUS1	YMR240C	SDH3	P33421	198 aa		4.12	□□□□□ -1.75
CUS1	YMR240C	SPT10	P35208	640 aa		4.12	□□□□□ -1.75
CUS1	YMR240C	YHR177W	P38867	453 aa		4.12	□□□□□ -1.75
CUS1	YMR240C	KRE9	P39005	276 aa		4.12	□□□□□ -1.75
CUS1	YMR240C	EFM3	P47163	339 aa		4.12	□□□□□ -1.75
CUS1	YMR240C	CUE3	P53137	624 aa	Known RBP	4.12	□□□□□ -1.75
CUS1	YMR240C	AQR1	P53943	586 aa		4.12	□□□□□ -1.75
CUS1	YMR240C	CCE1	Q03702	353 aa		4.12	□□□□□ -1.75
CUS1	YMR240C	SMA2	Q04658	369 aa		4.12	□□□□□ -1.75
CUS1	YMR240C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
CUS1	YMR240C	CAP2	P13517	287 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	TAL1	P15019	335 aa	Known RBP	4.11	□□□□□ -1.75
CUS1	YMR240C	EXG1	P23776	448 aa	Known RBP	4.11	□□□□□ -1.75
CUS1	YMR240C	CPR4	P25334	318 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	PSO2	P30620	661 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	TOA2	P32774	122 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	PRM5	P40476	318 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	YIL067C	P40514	678 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	WWM1	P43582	211 aa	Known RBP	4.11	□□□□□ -1.75
CUS1	YMR240C	NCA3	P46955	337 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	TOS2	P50078	622 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	HER2	Q03557	464 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	RTT103	Q05543	409 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	NDE2	Q07500	545 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	PML1	Q07930	204 aa	Predicted RBP	4.11	□□□□□ -1.75
CUS1	YMR240C	LDS2	Q08218	356 aa		4.11	□□□□□ -1.75
CUS1	YMR240C	POM152	P39685	1337 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	TPK3	P05986	398 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	PHO2	P07269	559 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	RNA1	P11745	407 aa	Known RBP	4.1	□□□□□ -1.75
CUS1	YMR240C	YEF1	P32622	495 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	RPS0A	P32905	252 aa	Known RBP	4.1	□□□□□ -1.75
CUS1	YMR240C	MSG5	P38590	489 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	YHR218W	P38899	603 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	YIL089W	P40500	205 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	RRN9	P53437	365 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	SPR6	Q01684	191 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	YOP1	Q12402	180 aa		4.1	□□□□□ -1.75
CUS1	YMR240C	PHA2	P32452	334 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	MCR1	P36060	302 aa	Known RBP	4.09	□□□□□ -1.75
CUS1	YMR240C	POP2	P39008	433 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	MTM1	P53320	366 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	BOR1	P53838	576 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	RRB1	Q04225	511 aa	Known RBP	4.09	□□□□□ -1.75
CUS1	YMR240C	PBA1	Q05778	276 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	MDM36	Q06820	579 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	ASA1	Q06822	443 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	PEX27	Q08580	376 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	ERV2	Q12284	196 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	HIF1	Q12373	385 aa		4.09	□□□□□ -1.75
CUS1	YMR240C	TRP1	P00912	224 aa		4.08	□□□□□ -1.76
CUS1	YMR240C	HHF1	P02309	103 aa	Known RBP	4.08	□□□□□ -1.76
CUS1	YMR240C	CYC3	P06182	269 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 74 ms