RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C RHB1P25378 209 aa2.22□□□□□ -2.05
VPS20YMR077C PFS1P38872 237 aa2.22□□□□□ -2.05
VPS20YMR077C YJR008WP47085 338 aa2.22□□□□□ -2.05
VPS20YMR077C PRM6Q04705 352 aa2.22□□□□□ -2.05
VPS20YMR077C STE7P06784 515 aa2.21□□□□□ -2.06
VPS20YMR077C TRX2P22803 104 aaKnown RBP2.21□□□□□ -2.06
VPS20YMR077C OTU2P38747 307 aaKnown RBP2.21□□□□□ -2.06
VPS20YMR077C MET18P40469 1032 aa2.21□□□□□ -2.06
VPS20YMR077C YGR250CP53316 781 aaKnown RBP2.21□□□□□ -2.06
VPS20YMR077C JJJ1P53863 590 aa2.21□□□□□ -2.06
VPS20YMR077C RPT6Q01939 405 aaKnown RBP2.21□□□□□ -2.06
VPS20YMR077C VTA1Q06263 330 aa2.21□□□□□ -2.06
VPS20YMR077C RKM1Q08961 583 aaPredicted RBP2.21□□□□□ -2.06
VPS20YMR077C SOR1P35497 357 aaKnown RBP2.2□□□□□ -2.06
VPS20YMR077C YBR056WP38081 501 aa2.2□□□□□ -2.06
VPS20YMR077C RRP4P38792 359 aaKnown RBP2.2□□□□□ -2.06
VPS20YMR077C PEX22P39718 180 aa2.2□□□□□ -2.06
VPS20YMR077C SOR2Q07786 357 aa2.2□□□□□ -2.06
VPS20YMR077C ATG34Q12292 412 aa2.2□□□□□ -2.06
VPS20YMR077C SCEIP03882 235 aa2.19□□□□□ -2.06
VPS20YMR077C GPI10P30777 616 aa2.19□□□□□ -2.06
VPS20YMR077C HXT3P32466 567 aaKnown RBP2.19□□□□□ -2.06
VPS20YMR077C AGA2P32781 87 aa2.19□□□□□ -2.06
VPS20YMR077C ATP3P38077 311 aaKnown RBP2.19□□□□□ -2.06
VPS20YMR077C GAT2P40209 560 aa2.19□□□□□ -2.06
VPS20YMR077C SPO22P40511 975 aa2.19□□□□□ -2.06
VPS20YMR077C AIP1P46680 615 aaKnown RBP2.19□□□□□ -2.06
VPS20YMR077C HRT1Q08273 121 aa2.19□□□□□ -2.06
VPS20YMR077C BEM1P29366 551 aa2.18□□□□□ -2.06
VPS20YMR077C PHO86P46956 311 aa2.18□□□□□ -2.06
VPS20YMR077C COQ5P49017 307 aa2.18□□□□□ -2.06
VPS20YMR077C YDR056CQ12025 205 aa2.18□□□□□ -2.06
VPS20YMR077C BUG1Q12191 341 aa2.18□□□□□ -2.06
VPS20YMR077C HTZ1Q12692 134 aaKnown RBP2.18□□□□□ -2.06
VPS20YMR077C EXG1P23776 448 aaKnown RBP2.17□□□□□ -2.06
VPS20YMR077C YPS6P40583 537 aa2.17□□□□□ -2.06
VPS20YMR077C HST4P53688 370 aa2.17□□□□□ -2.06
VPS20YMR077C SIL1Q08199 421 aa2.17□□□□□ -2.06
VPS20YMR077C TIR4Q12218 487 aaPredicted RBP2.17□□□□□ -2.06
VPS20YMR077C HOM3P10869 527 aa2.16□□□□□ -2.06
VPS20YMR077C CAP2P13517 287 aa2.16□□□□□ -2.06
VPS20YMR077C MNP1P53163 194 aaPredicted RBP2.16□□□□□ -2.06
VPS20YMR077C URH1Q04179 340 aa2.16□□□□□ -2.06
VPS20YMR077C YDL114WQ07530 308 aa2.16□□□□□ -2.06
VPS20YMR077C YPR096CO13587 100 aa2.15□□□□□ -2.07
VPS20YMR077C RPL3P14126 387 aaKnown RBP2.15□□□□□ -2.07
VPS20YMR077C GEX1P25596 615 aa2.15□□□□□ -2.07
VPS20YMR077C VAM3Q12241 283 aa2.15□□□□□ -2.07
VPS20YMR077C ASP3-2P0CX77 362 aa2.14□□□□□ -2.07
VPS20YMR077C ASP3-3P0CX78 362 aa2.14□□□□□ -2.07
VPS20YMR077C ASP3-4P0CX79 362 aa2.14□□□□□ -2.07
VPS20YMR077C ASP3-1P0CZ17 362 aa2.14□□□□□ -2.07
VPS20YMR077C RRP45Q05636 305 aaKnown RBP2.14□□□□□ -2.07
VPS20YMR077C NCA2Q12374 616 aa2.14□□□□□ -2.07
VPS20YMR077C CLC1P17891 233 aa2.13□□□□□ -2.07
VPS20YMR077C CMK2P22517 447 aa2.13□□□□□ -2.07
VPS20YMR077C ZIP1P31111 875 aa2.13□□□□□ -2.07
VPS20YMR077C AST1P35183 429 aa2.13□□□□□ -2.07
VPS20YMR077C SOL2P37262 315 aa2.13□□□□□ -2.07
VPS20YMR077C TOS3P43637 560 aa2.13□□□□□ -2.07
VPS20YMR077C YJL144WP47009 104 aa2.13□□□□□ -2.07
VPS20YMR077C RAD5P32849 1169 aaPredicted RBP2.12□□□□□ -2.07
VPS20YMR077C RRN10P38204 145 aa2.12□□□□□ -2.07
VPS20YMR077C ECM34P38728 170 aa2.12□□□□□ -2.07
VPS20YMR077C FHL1P39521 936 aa2.12□□□□□ -2.07
VPS20YMR077C FCY22Q12119 530 aa2.12□□□□□ -2.07
VPS20YMR077C GIT1P25346 518 aa2.11□□□□□ -2.07
VPS20YMR077C NTC20P38302 140 aaPredicted RBP2.11□□□□□ -2.07
VPS20YMR077C UTP9P38882 575 aaKnown RBP2.11□□□□□ -2.07
VPS20YMR077C COS5P47187 383 aa2.11□□□□□ -2.07
VPS20YMR077C COS1P53822 381 aa2.11□□□□□ -2.07
VPS20YMR077C COS7Q07788 383 aa2.11□□□□□ -2.07
VPS20YMR077C FUN26P31381 517 aa2.1□□□□□ -2.07
VPS20YMR077C LSM12P38828 187 aaKnown RBP2.1□□□□□ -2.07
VPS20YMR077C SMF1P38925 575 aa2.1□□□□□ -2.07
VPS20YMR077C ARF3P40994 183 aaRIP-Chip data2.1□□□□□ -2.07not detected
VPS20YMR077C STB1P42845 420 aa2.1□□□□□ -2.07
VPS20YMR077C MMT1Q03218 510 aa2.1□□□□□ -2.07
VPS20YMR077C ENT5Q03769 411 aaKnown RBP2.1□□□□□ -2.07
VPS20YMR077C COG4Q06096 861 aa2.1□□□□□ -2.07
VPS20YMR077C GRX6Q12438 231 aa2.1□□□□□ -2.07
VPS20YMR077C YCR024C-BQ3E7Z8 88 aa2.1□□□□□ -2.07
VPS20YMR077C ARG3P05150 338 aa2.09□□□□□ -2.07
VPS20YMR077C NIP1P32497 812 aaKnown RBP2.09□□□□□ -2.07
VPS20YMR077C MMS4P38257 691 aa2.09□□□□□ -2.07
VPS20YMR077C YGP1P38616 354 aaKnown RBP2.09□□□□□ -2.07
VPS20YMR077C TRR2P38816 342 aa2.09□□□□□ -2.07
VPS20YMR077C RRP46P53256 223 aaPredicted RBP2.09□□□□□ -2.07
VPS20YMR077C ZRG17P53735 605 aa2.09□□□□□ -2.07
VPS20YMR077C STD1Q02794 444 aa2.09□□□□□ -2.07
VPS20YMR077C IMH1Q06704 911 aaKnown RBP2.09□□□□□ -2.07
VPS20YMR077C LDB17Q12342 491 aa2.09□□□□□ -2.07
VPS20YMR077C SRV2P17555 526 aaKnown RBP2.08□□□□□ -2.08
VPS20YMR077C ECM7Q06200 448 aa2.08□□□□□ -2.08
VPS20YMR077C YDL199CQ12407 687 aa2.08□□□□□ -2.08
VPS20YMR077C IMA3P0CW40 589 aa2.07□□□□□ -2.08
VPS20YMR077C IMA4P0CW41 589 aa2.07□□□□□ -2.08
VPS20YMR077C SRB2P34162 210 aa2.07□□□□□ -2.08
VPS20YMR077C VEL1P53058 206 aa2.07□□□□□ -2.08
VPS20YMR077C YGL138CP53122 345 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms