RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A RSC9Q03124 581 aa11.9□□□□□ -0.5
LSM3YLR438C-A YOL159C-AQ3E769 90 aa11.9□□□□□ -0.5
LSM3YLR438C-A YIL046W-AQ3E7Z4 54 aa11.9□□□□□ -0.5
LSM3YLR438C-A SNF4P12904 322 aa11.89□□□□□ -0.51
LSM3YLR438C-A STE4P18851 423 aa11.89□□□□□ -0.51
LSM3YLR438C-A RER1P25560 188 aa11.89□□□□□ -0.51
LSM3YLR438C-A MXR2P25566 168 aa11.89□□□□□ -0.51
LSM3YLR438C-A DCG1P32460 244 aa11.89□□□□□ -0.51
LSM3YLR438C-A TRR2P38816 342 aa11.89□□□□□ -0.51
LSM3YLR438C-A SWD1P39706 426 aa11.89□□□□□ -0.51
LSM3YLR438C-A VPS52P39904 641 aa11.89□□□□□ -0.51
LSM3YLR438C-A YGR079WP53249 370 aa11.89□□□□□ -0.51
LSM3YLR438C-A ASI2P53895 289 aa11.89□□□□□ -0.51
LSM3YLR438C-A SNP1Q00916 300 aaPredicted RBP11.89□□□□□ -0.51
LSM3YLR438C-A SPR6Q01684 191 aa11.89□□□□□ -0.51
LSM3YLR438C-A YPR172WQ06608 200 aa11.89□□□□□ -0.51
LSM3YLR438C-A YPR091CQ06833 770 aa11.89□□□□□ -0.51
LSM3YLR438C-A VIK1Q12045 647 aa11.89□□□□□ -0.51
LSM3YLR438C-A TAF3Q12297 353 aa11.89□□□□□ -0.51
LSM3YLR438C-A CTR86P25355 563 aa11.88□□□□□ -0.51
LSM3YLR438C-A BUD14P27637 709 aa11.88□□□□□ -0.51
LSM3YLR438C-A GDH2P33327 1092 aaKnown RBP11.88□□□□□ -0.51
LSM3YLR438C-A MED8P38304 223 aa11.88□□□□□ -0.51
LSM3YLR438C-A YHR210CP38893 341 aa11.88□□□□□ -0.51
LSM3YLR438C-A VHR1P40522 640 aa11.88□□□□□ -0.51
LSM3YLR438C-A AGP3P43548 558 aa11.88□□□□□ -0.51
LSM3YLR438C-A AAD10P47182 288 aa11.88□□□□□ -0.51
LSM3YLR438C-A GPI8P49018 411 aa11.88□□□□□ -0.51
LSM3YLR438C-A MRK1P50873 501 aa11.88□□□□□ -0.51
LSM3YLR438C-A TWF1P53250 332 aa11.88□□□□□ -0.51
LSM3YLR438C-A IGO1P53897 168 aa11.88□□□□□ -0.51
LSM3YLR438C-A RIM13Q03792 727 aa11.88□□□□□ -0.51
LSM3YLR438C-A DCI1Q08558 271 aa11.88□□□□□ -0.51
LSM3YLR438C-A FBA1P14540 359 aaKnown RBP11.87□□□□□ -0.51
LSM3YLR438C-A TUL1P36096 758 aa11.87□□□□□ -0.51
LSM3YLR438C-A SLM4P38247 162 aa11.87□□□□□ -0.51
LSM3YLR438C-A IFA38P38286 347 aa11.87□□□□□ -0.51
LSM3YLR438C-A UBS1P38290 277 aa11.87□□□□□ -0.51
LSM3YLR438C-A THO1P40040 218 aaKnown RBP11.87□□□□□ -0.51
LSM3YLR438C-A YJR142WP47173 342 aa11.87□□□□□ -0.51
LSM3YLR438C-A ROM1P53046 1155 aa11.87□□□□□ -0.51
LSM3YLR438C-A YDR239CQ03780 787 aa11.87□□□□□ -0.51
LSM3YLR438C-A YMR226CQ05016 267 aaKnown RBP11.87□□□□□ -0.51
LSM3YLR438C-A PUS7Q08647 676 aaKnown RBP11.87□□□□□ -0.51
LSM3YLR438C-A RSA1Q08932 381 aa11.87□□□□□ -0.51
LSM3YLR438C-A IRA2P19158 3079 aa11.86□□□□□ -0.51
LSM3YLR438C-A SUI3P09064 285 aaKnown RBP11.86□□□□□ -0.51
LSM3YLR438C-A HOM3P10869 527 aa11.86□□□□□ -0.51
LSM3YLR438C-A CDC26P14724 124 aa11.86□□□□□ -0.51
LSM3YLR438C-A MDJ1P35191 511 aa11.86□□□□□ -0.51
LSM3YLR438C-A GIP2P40036 548 aa11.86□□□□□ -0.51
LSM3YLR438C-A ICE2P40499 491 aa11.86□□□□□ -0.51
LSM3YLR438C-A APS3P47064 194 aa11.86□□□□□ -0.51
LSM3YLR438C-A PMT3P47190 753 aa11.86□□□□□ -0.51
LSM3YLR438C-A YPR174CQ06616 221 aaPredicted RBP11.86□□□□□ -0.51
LSM3YLR438C-A MEU1Q07938 337 aaKnown RBP RIP-Chip data11.86□□□□□ -0.51not detected
LSM3YLR438C-A MCA1Q08601 432 aa11.86□□□□□ -0.51
LSM3YLR438C-A BSC1Q12140 328 aa11.86□□□□□ -0.51
LSM3YLR438C-A AAC3P18238 307 aa11.85□□□□□ -0.51
LSM3YLR438C-A MKK2P32491 506 aa11.85□□□□□ -0.51
LSM3YLR438C-A FES1P38260 290 aa11.85□□□□□ -0.51
LSM3YLR438C-A YIL152WP40455 235 aa11.85□□□□□ -0.51
LSM3YLR438C-A SNL1P40548 159 aa11.85□□□□□ -0.51
LSM3YLR438C-A BIT61P47041 543 aa11.85□□□□□ -0.51
LSM3YLR438C-A JHD2P47156 728 aaPredicted RBP11.85□□□□□ -0.51
LSM3YLR438C-A RAD30Q04049 632 aa11.85□□□□□ -0.51
LSM3YLR438C-A NAT4Q04751 285 aa11.85□□□□□ -0.51
LSM3YLR438C-A YOL073CQ08232 322 aa11.85□□□□□ -0.51
LSM3YLR438C-A YOR342CQ12182 319 aa11.85□□□□□ -0.51
LSM3YLR438C-A GLE1Q12315 538 aa11.85□□□□□ -0.51
LSM3YLR438C-A TSC13Q99190 310 aa11.85□□□□□ -0.51
LSM3YLR438C-A APE2P32454 952 aaKnown RBP11.84□□□□□ -0.51
LSM3YLR438C-A PTR2P32901 601 aa11.84□□□□□ -0.51
LSM3YLR438C-A LOT5P34234 306 aa11.84□□□□□ -0.51
LSM3YLR438C-A MPM1P40364 252 aa11.84□□□□□ -0.51
LSM3YLR438C-A MET28P40573 187 aa11.84□□□□□ -0.51
LSM3YLR438C-A RNH70P53331 553 aa11.84□□□□□ -0.51
LSM3YLR438C-A YPL107WQ02873 248 aa11.84□□□□□ -0.51
LSM3YLR438C-A VID22Q05934 901 aa11.84□□□□□ -0.51
LSM3YLR438C-A YOR365CQ08844 703 aa11.84□□□□□ -0.51
LSM3YLR438C-A SLH1P53327 1967 aaKnown RBP11.83□□□□□ -0.52
LSM3YLR438C-A CDC4P07834 779 aa11.83□□□□□ -0.52
LSM3YLR438C-A ATR1P13090 542 aa11.83□□□□□ -0.52
LSM3YLR438C-A UBC8P28263 218 aa11.83□□□□□ -0.52
LSM3YLR438C-A FAA1P30624 700 aaKnown RBP11.83□□□□□ -0.52
LSM3YLR438C-A MBP1P39678 833 aa11.83□□□□□ -0.52
LSM3YLR438C-A UTP25P40498 721 aaKnown RBP11.83□□□□□ -0.52
LSM3YLR438C-A FAR7P43592 221 aa11.83□□□□□ -0.52
LSM3YLR438C-A ALB1P47019 175 aaPredicted RBP11.83□□□□□ -0.52
LSM3YLR438C-A SPT20P50875 604 aa11.83□□□□□ -0.52
LSM3YLR438C-A ARI1P53111 347 aaKnown RBP11.83□□□□□ -0.52
LSM3YLR438C-A HOT1Q03213 719 aa11.83□□□□□ -0.52
LSM3YLR438C-A SMA2Q04658 369 aa11.83□□□□□ -0.52
LSM3YLR438C-A SWA2Q06677 668 aa11.83□□□□□ -0.52
LSM3YLR438C-A DTD1Q07648 150 aaKnown RBP11.83□□□□□ -0.52
LSM3YLR438C-A RPL17AP05740 184 aaKnown RBP11.82□□□□□ -0.52
LSM3YLR438C-A CBS1P14066 229 aa11.82□□□□□ -0.52
LSM3YLR438C-A PET9P18239 318 aaKnown RBP11.82□□□□□ -0.52
LSM3YLR438C-A YIM1P28625 365 aa11.82□□□□□ -0.52
LSM3YLR438C-A YOR062CP36025 268 aa11.82□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms