RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	CHS6	P40955	746 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	YFR020W	P43600	232 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	ALT2	P52892	507 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	MNP1	P53163	194 aa	Predicted RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	HOP2	P53187	214 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	ERG26	P53199	349 aa	Known RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	COS6	P53344	381 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	IPI3	P53877	555 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	YML108W	Q03759	105 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	SMA2	Q04658	369 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	HEL2	Q05580	639 aa	Known RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	YOL159C	Q08300	171 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	DNL4	Q08387	944 aa	Predicted RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	VIK1	Q12045	647 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	DAS2	Q12084	232 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	CFT2	Q12102	859 aa	Predicted RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	YBR298C-A	Q8TGK4	73 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	FKS3	Q04952	1785 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	RPL24A	P04449	155 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	RPL31B	P0C2H9	113 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	RPL3	P14126	387 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	YAK1	P14680	807 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	OSM1	P21375	501 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	VPS1	P21576	704 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	DPB2	P24482	689 aa	Predicted RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	PHO84	P25297	587 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	UBC6	P33296	250 aa	Predicted RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	SUR1	P33300	382 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	UTP11	P34247	250 aa	Predicted RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	AST1	P35183	429 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	AIM22	P47051	409 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	YGR149W	P48236	432 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	LSG1	P53145	640 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	RPM2	Q02773	1202 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	YMR178W	Q03219	274 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	RRP45	Q05636	305 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	COQ9	Q05779	260 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	DCI1	Q08558	271 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	NCE102	Q12207	173 aa	RIP-Chip data	3.18	□□□□□ -1.9	not detected
RPN13	YLR421C	CSR2	Q12734	1121 aa		3.18	□□□□□ -1.9
RPN13	YLR421C	FAS2	P19097	1887 aa	Known RBP	3.18	□□□□□ -1.9
RPN13	YLR421C	GPH1	P06738	902 aa	Known RBP	3.17	□□□□□ -1.9
RPN13	YLR421C	CLN3	P13365	580 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	FAR1	P21268	830 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	CLB2	P24869	491 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	CPR3	P25719	182 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	YIM1	P28625	365 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	YME1	P32795	747 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	MTR2	P34232	184 aa	Known RBP	3.17	□□□□□ -1.9
RPN13	YLR421C	YBR032W	P38223	100 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	RFC3	P38629	340 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	YHR218W	P38899	603 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	AFG3	P39925	761 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	YMR147W	P40218	223 aa	Known RBP	3.17	□□□□□ -1.9
RPN13	YLR421C	PDS1	P40316	373 aa	Predicted RBP	3.17	□□□□□ -1.9
RPN13	YLR421C	HXT9	P40885	567 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	FMP33	P46998	180 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	YJL132W	P47014	750 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	EFM3	P47163	339 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	YGL138C	P53122	345 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	YNR068C	P53754	272 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	OSH6	Q02201	448 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	RPN9	Q04062	393 aa	Known RBP	3.17	□□□□□ -1.9
RPN13	YLR421C	ARP10	Q04549	284 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	YFH1	Q07540	174 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	YOL075C	Q08234	1294 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	RPS10A	Q08745	105 aa	Predicted RBP	3.17	□□□□□ -1.9
RPN13	YLR421C	RKM1	Q08961	583 aa	Predicted RBP	3.17	□□□□□ -1.9
RPN13	YLR421C	MED2	Q12124	431 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	RRD2	Q12461	358 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	SEY1	Q99287	776 aa		3.17	□□□□□ -1.9
RPN13	YLR421C	HIS4	P00815	799 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	ARG81	P05085	880 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	RPL6B	P05739	176 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	HIS3	P06633	220 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	PEP4	P07267	405 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	SPS4	P09937	338 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	RSR1	P13856	272 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	SPO7	P18410	259 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	URA4	P20051	364 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	DBP3	P20447	523 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	UBA1	P22515	1024 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	TKL1	P23254	680 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	PPH22	P23595	377 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	KRE2	P27809	442 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	RAD14	P28519	371 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	SMY1	P32364	656 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	SRB2	P34162	210 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	BMH2	P34730	273 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	RCN1	P36054	211 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	MRPL4	P36517	319 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	NTC20	P38302	140 aa	Predicted RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	ERG7	P38604	731 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	RCK2	P38623	610 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	VMA22	P38784	181 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	PCF11	P39081	626 aa	Predicted RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	YHB1	P39676	399 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	NPT1	P39683	429 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	VHS2	P40463	436 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	RTS2	P40962	232 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms