RNA–Protein interactions for RNA: YLR410W-A

YLR410W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YLR410W-A, Length 1,317 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR410W-AYLR410W-A MSI1P13712 422 aa3.35□□□□□ -1.87
YLR410W-AYLR410W-A HSP26P15992 214 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
YLR410W-AYLR410W-A AAT2P23542 418 aaKnown RBP3.35□□□□□ -1.87
YLR410W-AYLR410W-A ERV1P27882 189 aa3.35□□□□□ -1.87
YLR410W-AYLR410W-A YER079WP40052 210 aaKnown RBP3.35□□□□□ -1.87
YLR410W-AYLR410W-A GAT2P40209 560 aa3.35□□□□□ -1.87
YLR410W-AYLR410W-A TSA2Q04120 196 aa3.35□□□□□ -1.87
YLR410W-AYLR410W-A LOT6Q07923 191 aa3.35□□□□□ -1.87
YLR410W-AYLR410W-A SMF3Q12078 473 aaPredicted RBP3.35□□□□□ -1.87
YLR410W-AYLR410W-A DST1P07273 309 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A RPB5P20434 215 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A PHA2P32452 334 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A NIP1P32497 812 aaKnown RBP3.34□□□□□ -1.87
YLR410W-AYLR410W-A HEL1P36113 551 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A ASC1P38011 319 aaKnown RBP3.34□□□□□ -1.87
YLR410W-AYLR410W-A MRP21P38175 177 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A OLA1P38219 394 aaKnown RBP3.34□□□□□ -1.87
YLR410W-AYLR410W-A VHS2P40463 436 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A ZIM17P42844 174 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A TOS3P43637 560 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A LCB3P47013 409 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A AIM24P47127 394 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A RRP46P53256 223 aaPredicted RBP3.34□□□□□ -1.87
YLR410W-AYLR410W-A SMC5Q08204 1093 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A RUP1Q12242 671 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A EAF3Q12432 401 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A AHC1Q12433 566 aa3.34□□□□□ -1.87
YLR410W-AYLR410W-A SPT10P35208 640 aa3.33□□□□□ -1.88
YLR410W-AYLR410W-A MID2P36027 376 aa3.33□□□□□ -1.88
YLR410W-AYLR410W-A YPS6P40583 537 aa3.33□□□□□ -1.88
YLR410W-AYLR410W-A YMR102CQ03177 834 aa3.33□□□□□ -1.88
YLR410W-AYLR410W-A YDR131CQ03899 556 aa3.33□□□□□ -1.88
YLR410W-AYLR410W-A RPN9Q04062 393 aaKnown RBP3.33□□□□□ -1.88
YLR410W-AYLR410W-A SNT309Q06091 175 aaPredicted RBP3.33□□□□□ -1.88
YLR410W-AYLR410W-A CMS1Q07897 291 aaKnown RBP3.33□□□□□ -1.88
YLR410W-AYLR410W-A COX3P00420 269 aa3.32□□□□□ -1.88
YLR410W-AYLR410W-A CDC21P06785 304 aa3.32□□□□□ -1.88
YLR410W-AYLR410W-A ATP1P07251 545 aaKnown RBP3.32□□□□□ -1.88
YLR410W-AYLR410W-A CPR2P23285 205 aa3.32□□□□□ -1.88
YLR410W-AYLR410W-A EXG1P23776 448 aaKnown RBP3.32□□□□□ -1.88
YLR410W-AYLR410W-A COX13P32799 129 aa3.32□□□□□ -1.88
YLR410W-AYLR410W-A OXA1P39952 402 aa3.32□□□□□ -1.88
YLR410W-AYLR410W-A MMF1P40185 145 aaKnown RBP3.32□□□□□ -1.88
YLR410W-AYLR410W-A TOM22P49334 152 aa3.32□□□□□ -1.88
YLR410W-AYLR410W-A PIB2P53191 635 aa3.32□□□□□ -1.88
YLR410W-AYLR410W-A PRP42Q03776 544 aaKnown RBP3.32□□□□□ -1.88
YLR410W-AYLR410W-A PIS1P06197 220 aaKnown RBP3.31□□□□□ -1.88
YLR410W-AYLR410W-A CAP2P13517 287 aa3.31□□□□□ -1.88
YLR410W-AYLR410W-A RIM1P32445 135 aaKnown RBP3.31□□□□□ -1.88
YLR410W-AYLR410W-A IES6P32617 166 aa3.31□□□□□ -1.88
YLR410W-AYLR410W-A ZTA1P38230 334 aaKnown RBP3.31□□□□□ -1.88
YLR410W-AYLR410W-A MST27P53176 234 aa3.31□□□□□ -1.88
YLR410W-AYLR410W-A HTZ1Q12692 134 aaKnown RBP3.31□□□□□ -1.88
YLR410W-AYLR410W-A HSP104P31539 908 aaKnown RBP3.3□□□□□ -1.88
YLR410W-AYLR410W-A DPH5P32469 300 aaPredicted RBP3.3□□□□□ -1.88
YLR410W-AYLR410W-A SER3P40054 469 aa3.3□□□□□ -1.88
YLR410W-AYLR410W-A SIM1P40472 476 aa3.3□□□□□ -1.88
YLR410W-AYLR410W-A TCB2P48231 1178 aa3.3□□□□□ -1.88
YLR410W-AYLR410W-A AIM32Q04689 311 aa3.3□□□□□ -1.88
YLR410W-AYLR410W-A PRM6Q04705 352 aa3.3□□□□□ -1.88
YLR410W-AYLR410W-A ARO3P14843 370 aaKnown RBP3.29□□□□□ -1.88
YLR410W-AYLR410W-A MDH1P17505 334 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
YLR410W-AYLR410W-A EGT2P42835 1041 aa3.29□□□□□ -1.88
YLR410W-AYLR410W-A YGR111WP53265 400 aa3.29□□□□□ -1.88
YLR410W-AYLR410W-A CRH1P53301 507 aa3.29□□□□□ -1.88
YLR410W-AYLR410W-A POM152P39685 1337 aa3.29□□□□□ -1.88
YLR410W-AYLR410W-A PSK1P31374 1356 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A PDE2P06776 526 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A YEF1P32622 495 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A SKN1P33336 771 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A INM1P38710 295 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A FAD1P38913 306 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A STN1P38960 494 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A YNL208WP40159 199 aaKnown RBP3.28□□□□□ -1.88
YLR410W-AYLR410W-A CLD1P53264 445 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A MKC7P53379 596 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A SPR6Q01684 191 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A TDA1Q03533 586 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A DCI1Q08558 271 aa3.28□□□□□ -1.88
YLR410W-AYLR410W-A SKT5P34226 696 aa3.27□□□□□ -1.89
YLR410W-AYLR410W-A YKL097CP34245 136 aa3.27□□□□□ -1.89
YLR410W-AYLR410W-A YHK8P38776 514 aa3.27□□□□□ -1.89
YLR410W-AYLR410W-A YET2Q04210 160 aa3.27□□□□□ -1.89
YLR410W-AYLR410W-A SLM5P25345 492 aaKnown RBP3.26□□□□□ -1.89
YLR410W-AYLR410W-A CDC50P25656 391 aa3.26□□□□□ -1.89
YLR410W-AYLR410W-A RAD5P32849 1169 aaPredicted RBP3.26□□□□□ -1.89
YLR410W-AYLR410W-A BAT1P38891 393 aaKnown RBP3.26□□□□□ -1.89
YLR410W-AYLR410W-A ATG18P43601 500 aa3.26□□□□□ -1.89
YLR410W-AYLR410W-A BNS1P50084 137 aa3.26□□□□□ -1.89
YLR410W-AYLR410W-A VHS1Q03785 461 aa3.26□□□□□ -1.89
YLR410W-AYLR410W-A YLR345WQ06137 509 aa3.26□□□□□ -1.89
YLR410W-AYLR410W-A YCR024C-BQ3E7Z8 88 aa3.26□□□□□ -1.89
YLR410W-AYLR410W-A NAG1Q8TGN9 163 aa3.26□□□□□ -1.89
YLR410W-AYLR410W-A CHS6P40955 746 aa3.25□□□□□ -1.89
YLR410W-AYLR410W-A YGR117CP53270 476 aa3.25□□□□□ -1.89
YLR410W-AYLR410W-A TRM112P53738 135 aaPredicted RBP3.25□□□□□ -1.89
YLR410W-AYLR410W-A YDR341CQ05506 607 aaKnown RBP3.25□□□□□ -1.89
YLR410W-AYLR410W-A YLR456WQ06199 204 aa3.25□□□□□ -1.89
YLR410W-AYLR410W-A COX4P04037 155 aa3.24□□□□□ -1.89
YLR410W-AYLR410W-A ALG1P16661 449 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms