RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C COX3P00420 269 aa2.18□□□□□ -2.06
CMS1YLR003C RPS8AP0CX39 200 aaKnown RBP2.18□□□□□ -2.06
CMS1YLR003C RPS8BP0CX40 200 aaKnown RBP2.18□□□□□ -2.06
CMS1YLR003C ARO3P14843 370 aaKnown RBP2.18□□□□□ -2.06
CMS1YLR003C SLM5P25345 492 aaKnown RBP2.18□□□□□ -2.06
CMS1YLR003C YCL068CP25593 260 aa2.18□□□□□ -2.06
CMS1YLR003C GEX1P25596 615 aa2.18□□□□□ -2.06
CMS1YLR003C PHO91P27514 894 aa2.18□□□□□ -2.06
CMS1YLR003C COX13P32799 129 aa2.18□□□□□ -2.06
CMS1YLR003C LTV1P34078 463 aa2.18□□□□□ -2.06
CMS1YLR003C YKL097CP34245 136 aa2.18□□□□□ -2.06
CMS1YLR003C COX14P39103 70 aa2.18□□□□□ -2.06
CMS1YLR003C GAT2P40209 560 aa2.18□□□□□ -2.06
CMS1YLR003C EFM4P40516 257 aa2.18□□□□□ -2.06
CMS1YLR003C BRO1P48582 844 aa2.18□□□□□ -2.06
CMS1YLR003C MDG1P53885 366 aa2.18□□□□□ -2.06
CMS1YLR003C YLR456WQ06199 204 aa2.18□□□□□ -2.06
CMS1YLR003C SPE3Q12074 293 aaKnown RBP2.18□□□□□ -2.06
CMS1YLR003C NCA2Q12374 616 aa2.18□□□□□ -2.06
CMS1YLR003C AHC1Q12433 566 aa2.18□□□□□ -2.06
CMS1YLR003C PAR32Q12515 295 aaKnown RBP2.18□□□□□ -2.06
CMS1YLR003C BI3Q9ZZW7 517 aa2.18□□□□□ -2.06
CMS1YLR003C CYC3P06182 269 aa2.17□□□□□ -2.06
CMS1YLR003C NFT1P0CE68 1218 aa2.17□□□□□ -2.06
CMS1YLR003C PEX5P35056 612 aa2.17□□□□□ -2.06
CMS1YLR003C INM1P38710 295 aa2.17□□□□□ -2.06
CMS1YLR003C JLP2P40206 208 aa2.17□□□□□ -2.06
CMS1YLR003C BUD27P43573 796 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
CMS1YLR003C YML6P51998 286 aa2.17□□□□□ -2.06
CMS1YLR003C ADA2Q02336 434 aa2.17□□□□□ -2.06
CMS1YLR003C RRP9Q06506 573 aaKnown RBP2.17□□□□□ -2.06
CMS1YLR003C HSP104P31539 908 aaKnown RBP2.16□□□□□ -2.06
CMS1YLR003C NRP1P32770 719 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
CMS1YLR003C STP2P38704 541 aa2.16□□□□□ -2.06
CMS1YLR003C GPI16P38875 610 aa2.16□□□□□ -2.06
CMS1YLR003C GDI1P39958 451 aaKnown RBP2.16□□□□□ -2.06
CMS1YLR003C LCB3P47013 409 aa2.16□□□□□ -2.06
CMS1YLR003C MDE1P47095 244 aa2.16□□□□□ -2.06
CMS1YLR003C MTM1P53320 366 aa2.16□□□□□ -2.06
CMS1YLR003C MTQ1P53944 314 aa2.16□□□□□ -2.06
CMS1YLR003C ERO1Q03103 563 aa2.16□□□□□ -2.06
CMS1YLR003C URH1Q04179 340 aa2.16□□□□□ -2.06
CMS1YLR003C SNT309Q06091 175 aaPredicted RBP2.16□□□□□ -2.06
CMS1YLR003C RPN5Q12250 445 aaKnown RBP2.16□□□□□ -2.06
CMS1YLR003C TPT1Q12272 230 aaKnown RBP2.16□□□□□ -2.06
CMS1YLR003C OPI3P05375 206 aa2.15□□□□□ -2.07
CMS1YLR003C ATP1P07251 545 aaKnown RBP2.15□□□□□ -2.07
CMS1YLR003C CAP2P13517 287 aa2.15□□□□□ -2.07
CMS1YLR003C ALG1P16661 449 aa2.15□□□□□ -2.07
CMS1YLR003C MDL1P33310 695 aa2.15□□□□□ -2.07
CMS1YLR003C SKN1P33336 771 aa2.15□□□□□ -2.07
CMS1YLR003C SBE22P38814 852 aa2.15□□□□□ -2.07
CMS1YLR003C MNL1P38888 796 aa2.15□□□□□ -2.07
CMS1YLR003C STN1P38960 494 aa2.15□□□□□ -2.07
CMS1YLR003C TOS3P43637 560 aa2.15□□□□□ -2.07
CMS1YLR003C YJR085CP47131 105 aaKnown RBP2.15□□□□□ -2.07
CMS1YLR003C MRM2P53123 320 aa2.15□□□□□ -2.07
CMS1YLR003C SPR6Q01684 191 aa2.15□□□□□ -2.07
CMS1YLR003C PRP42Q03776 544 aaKnown RBP2.15□□□□□ -2.07
CMS1YLR003C IRC25Q07951 179 aa2.15□□□□□ -2.07
CMS1YLR003C UAF30Q08747 228 aa2.15□□□□□ -2.07
CMS1YLR003C RAX1Q08760 435 aa2.15□□□□□ -2.07
CMS1YLR003C EAF3Q12432 401 aa2.15□□□□□ -2.07
CMS1YLR003C EXG1P23776 448 aaKnown RBP2.14□□□□□ -2.07
CMS1YLR003C CSE2P33308 149 aa2.14□□□□□ -2.07
CMS1YLR003C RRP1P35178 278 aaPredicted RBP2.14□□□□□ -2.07
CMS1YLR003C QDR3P38227 689 aa2.14□□□□□ -2.07
CMS1YLR003C PFF1P38244 976 aa2.14□□□□□ -2.07
CMS1YLR003C ATM1P40416 690 aa2.14□□□□□ -2.07
CMS1YLR003C CHS6P40955 746 aa2.14□□□□□ -2.07
CMS1YLR003C HAC1P41546 238 aa2.14□□□□□ -2.07
CMS1YLR003C TOM22P49334 152 aa2.14□□□□□ -2.07
CMS1YLR003C TRM112P53738 135 aaPredicted RBP2.14□□□□□ -2.07
CMS1YLR003C RPN9Q04062 393 aaKnown RBP2.14□□□□□ -2.07
CMS1YLR003C LIP2Q06005 328 aa2.14□□□□□ -2.07
CMS1YLR003C RUP1Q12242 671 aa2.14□□□□□ -2.07
CMS1YLR003C IZH2Q12442 317 aa2.14□□□□□ -2.07
CMS1YLR003C CEX1Q12453 761 aa2.14□□□□□ -2.07
CMS1YLR003C POM152P39685 1337 aa2.14□□□□□ -2.07
CMS1YLR003C TPK3P05986 398 aa2.13□□□□□ -2.07
CMS1YLR003C KAR9P32526 644 aa2.13□□□□□ -2.07
CMS1YLR003C YSC83P32792 385 aa2.13□□□□□ -2.07
CMS1YLR003C DOA1P36037 715 aa2.13□□□□□ -2.07
CMS1YLR003C KAP104P38217 918 aaKnown RBP2.13□□□□□ -2.07
CMS1YLR003C ECM8P38246 354 aa2.13□□□□□ -2.07
CMS1YLR003C AIM10P39965 576 aaKnown RBP2.13□□□□□ -2.07
CMS1YLR003C MAM33P40513 266 aa2.13□□□□□ -2.07
CMS1YLR003C YPS6P40583 537 aa2.13□□□□□ -2.07
CMS1YLR003C BIR1P47134 954 aa2.13□□□□□ -2.07
CMS1YLR003C YIP5P53108 310 aa2.13□□□□□ -2.07
CMS1YLR003C MEH1Q02205 184 aa2.13□□□□□ -2.07
CMS1YLR003C YDR541CQ03049 344 aa2.13□□□□□ -2.07
CMS1YLR003C RTN1Q04947 295 aaKnown RBP2.13□□□□□ -2.07
CMS1YLR003C RIF2Q06208 395 aa2.13□□□□□ -2.07
CMS1YLR003C ASA1Q06822 443 aa2.13□□□□□ -2.07
CMS1YLR003C SMF3Q12078 473 aaPredicted RBP2.13□□□□□ -2.07
CMS1YLR003C SNU66Q12420 587 aaPredicted RBP2.13□□□□□ -2.07
CMS1YLR003C HTZ1Q12692 134 aaKnown RBP2.13□□□□□ -2.07
CMS1YLR003C HSP26P15992 214 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
CMS1YLR003C DPH5P32469 300 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms