RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C SKY1Q03656 742 aa3.14□□□□□ -1.91
YIR040CYIR040C TRM82Q03774 444 aa3.14□□□□□ -1.91
YIR040CYIR040C CSN9Q03981 162 aa3.14□□□□□ -1.91
YIR040CYIR040C PPM1Q04081 328 aa3.14□□□□□ -1.91
YIR040CYIR040C YMR027WQ04371 470 aa3.14□□□□□ -1.91
YIR040CYIR040C YLR283WQ05867 314 aa3.14□□□□□ -1.91
YIR040CYIR040C BUR2Q05949 395 aa3.14□□□□□ -1.91
YIR040CYIR040C STE23Q06010 1027 aa3.14□□□□□ -1.91
YIR040CYIR040C THI22Q06490 572 aa3.14□□□□□ -1.91
YIR040CYIR040C MHR1Q06630 226 aa3.14□□□□□ -1.91
YIR040CYIR040C YET3Q07451 203 aa3.14□□□□□ -1.91
YIR040CYIR040C YLL007CQ07799 665 aa3.14□□□□□ -1.91
YIR040CYIR040C SKI7Q08491 747 aaPredicted RBP3.14□□□□□ -1.91
YIR040CYIR040C DCI1Q08558 271 aa3.14□□□□□ -1.91
YIR040CYIR040C GPM2Q12008 311 aa3.14□□□□□ -1.91
YIR040CYIR040C BAG7Q12128 409 aa3.14□□□□□ -1.91
YIR040CYIR040C YPR022CQ12139 1133 aa3.14□□□□□ -1.91
YIR040CYIR040C PER33Q12144 273 aa3.14□□□□□ -1.91
YIR040CYIR040C SFM1Q12314 213 aa3.14□□□□□ -1.91
YIR040CYIR040C EMP46Q12396 444 aa3.14□□□□□ -1.91
YIR040CYIR040C WIP1Q2V2P8 89 aa3.14□□□□□ -1.91
YIR040CYIR040C BUD4P47136 1447 aa3.13□□□□□ -1.91
YIR040CYIR040C YLR419WQ06698 1435 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C CMD1P06787 147 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C MET2P08465 486 aa3.13□□□□□ -1.91
YIR040CYIR040C COS2P0CX12 379 aa3.13□□□□□ -1.91
YIR040CYIR040C COS3P0CX13 379 aa3.13□□□□□ -1.91
YIR040CYIR040C MRP2P10663 115 aaPredicted RBP3.13□□□□□ -1.91
YIR040CYIR040C ABF1P14164 731 aa3.13□□□□□ -1.91
YIR040CYIR040C UGA1P17649 471 aa3.13□□□□□ -1.91
YIR040CYIR040C SAR1P20606 190 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C RNR3P21672 869 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C CLB2P24869 491 aa3.13□□□□□ -1.91
YIR040CYIR040C CPR3P25719 182 aa3.13□□□□□ -1.91
YIR040CYIR040C PMT2P31382 759 aa3.13□□□□□ -1.91
YIR040CYIR040C HXT3P32466 567 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C PDB1P32473 366 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C YPT7P32939 208 aa3.13□□□□□ -1.91
YIR040CYIR040C UPS2P35200 230 aa3.13□□□□□ -1.91
YIR040CYIR040C RPF2P36160 344 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C ECM31P38122 312 aa3.13□□□□□ -1.91
YIR040CYIR040C DTR1P38125 572 aa3.13□□□□□ -1.91
YIR040CYIR040C FMP23P38231 175 aa3.13□□□□□ -1.91
YIR040CYIR040C SHE3P38272 425 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C TSC10P38342 320 aa3.13□□□□□ -1.91
YIR040CYIR040C DIA4P38705 446 aaPredicted RBP3.13□□□□□ -1.91
YIR040CYIR040C FET3P38993 636 aa3.13□□□□□ -1.91
YIR040CYIR040C VRG4P40107 337 aa3.13□□□□□ -1.91
YIR040CYIR040C RGI2P40188 164 aa3.13□□□□□ -1.91
YIR040CYIR040C PSF2P40359 213 aa3.13□□□□□ -1.91
YIR040CYIR040C CFD1P40558 293 aa3.13□□□□□ -1.91
YIR040CYIR040C ERG10P41338 398 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C SER2P42941 309 aa3.13□□□□□ -1.91
YIR040CYIR040C COS4P43542 379 aa3.13□□□□□ -1.91
YIR040CYIR040C FMP32P43557 207 aa3.13□□□□□ -1.91
YIR040CYIR040C SIP4P46954 829 aa3.13□□□□□ -1.91
YIR040CYIR040C HIT1P46973 164 aa3.13□□□□□ -1.91
YIR040CYIR040C YHC3P47040 408 aa3.13□□□□□ -1.91
YIR040CYIR040C TAH11P47112 604 aa3.13□□□□□ -1.91
YIR040CYIR040C YJR096WP47137 282 aa3.13□□□□□ -1.91
YIR040CYIR040C COS5P47187 383 aa3.13□□□□□ -1.91
YIR040CYIR040C NAS6P50086 228 aa3.13□□□□□ -1.91
YIR040CYIR040C NBP1P52919 319 aaPredicted RBP3.13□□□□□ -1.91
YIR040CYIR040C YGL114WP53134 725 aa3.13□□□□□ -1.91
YIR040CYIR040C VPS73P53142 486 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C DUO1P53168 247 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C PNC1P53184 216 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C IMO32P53219 342 aa3.13□□□□□ -1.91
YIR040CYIR040C YGR126WP53274 230 aa3.13□□□□□ -1.91
YIR040CYIR040C COS1P53822 381 aa3.13□□□□□ -1.91
YIR040CYIR040C PRP38Q00723 242 aaPredicted RBP3.13□□□□□ -1.91
YIR040CYIR040C RPA49Q01080 415 aaPredicted RBP3.13□□□□□ -1.91
YIR040CYIR040C YMR209CQ03648 457 aa3.13□□□□□ -1.91
YIR040CYIR040C YMR210WQ03649 449 aa3.13□□□□□ -1.91
YIR040CYIR040C YMR010WQ03687 405 aa3.13□□□□□ -1.91
YIR040CYIR040C ENT5Q03769 411 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C YDR239CQ03780 787 aa3.13□□□□□ -1.91
YIR040CYIR040C CIA1Q05583 330 aa3.13□□□□□ -1.91
YIR040CYIR040C ECM22Q05958 814 aaPredicted RBP3.13□□□□□ -1.91
YIR040CYIR040C NSE1Q07913 336 aa3.13□□□□□ -1.91
YIR040CYIR040C NGL1Q08213 363 aaKnown RBP3.13□□□□□ -1.91
YIR040CYIR040C GSH2Q08220 491 aa3.13□□□□□ -1.91
YIR040CYIR040C NRT1Q08485 598 aa3.13□□□□□ -1.91
YIR040CYIR040C TAF10Q12030 206 aa3.13□□□□□ -1.91
YIR040CYIR040C RCN2Q12044 265 aa3.13□□□□□ -1.91
YIR040CYIR040C YOR114WQ12219 294 aa3.13□□□□□ -1.91
YIR040CYIR040C UBX3Q12229 455 aa3.13□□□□□ -1.91
YIR040CYIR040C YDR262WQ12331 272 aa3.13□□□□□ -1.91
YIR040CYIR040C YOP1Q12402 180 aa3.13□□□□□ -1.91
YIR040CYIR040C PEP1P32319 1579 aa3.12□□□□□ -1.91
YIR040CYIR040C TRM732Q03496 1420 aa3.12□□□□□ -1.91
YIR040CYIR040C YOR304C-AO14468 76 aa3.12□□□□□ -1.91
YIR040CYIR040C ATP2P00830 511 aaKnown RBP3.12□□□□□ -1.91
YIR040CYIR040C RPS28BP0C0X0 67 aaKnown RBP3.12□□□□□ -1.91
YIR040CYIR040C RPL1AP0CX43 217 aaKnown RBP3.12□□□□□ -1.91
YIR040CYIR040C RPL1BP0CX44 217 aaKnown RBP3.12□□□□□ -1.91
YIR040CYIR040C REV1P12689 985 aa3.12□□□□□ -1.91
YIR040CYIR040C CLN3P13365 580 aa3.12□□□□□ -1.91
YIR040CYIR040C STE18P18852 110 aa3.12□□□□□ -1.91
YIR040CYIR040C VPS33P20795 691 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms