RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C RIM1P32445 135 aaKnown RBP2.22□□□□□ -2.05
TPM2YIL138C CYS4P32582 507 aaKnown RBP2.22□□□□□ -2.05
TPM2YIL138C LTV1P34078 463 aa2.22□□□□□ -2.05
TPM2YIL138C ASC1P38011 319 aaKnown RBP2.22□□□□□ -2.05
TPM2YIL138C YAL037WP39728 267 aa2.22□□□□□ -2.05
TPM2YIL138C PRM5P40476 318 aa2.22□□□□□ -2.05
TPM2YIL138C HAL1Q01766 294 aa2.22□□□□□ -2.05
TPM2YIL138C IMA2Q08295 589 aa2.22□□□□□ -2.05
TPM2YIL138C ATG34Q12292 412 aa2.22□□□□□ -2.05
TPM2YIL138C COX3P00420 269 aa2.21□□□□□ -2.06
TPM2YIL138C TRP1P00912 224 aa2.21□□□□□ -2.06
TPM2YIL138C UTH1P36135 365 aa2.21□□□□□ -2.06
TPM2YIL138C ATP3P38077 311 aaKnown RBP2.21□□□□□ -2.06
TPM2YIL138C OLA1P38219 394 aaKnown RBP2.21□□□□□ -2.06
TPM2YIL138C YBR137WP38276 179 aa2.21□□□□□ -2.06
TPM2YIL138C GAT2P40209 560 aa2.21□□□□□ -2.06
TPM2YIL138C EFM4P40516 257 aa2.21□□□□□ -2.06
TPM2YIL138C TOM22P49334 152 aa2.21□□□□□ -2.06
TPM2YIL138C RHO5P53879 331 aaKnown RBP2.21□□□□□ -2.06
TPM2YIL138C STD1Q02794 444 aa2.21□□□□□ -2.06
TPM2YIL138C HRI1Q05905 244 aaKnown RBP2.21□□□□□ -2.06
TPM2YIL138C YLR456WQ06199 204 aa2.21□□□□□ -2.06
TPM2YIL138C UAF30Q08747 228 aa2.21□□□□□ -2.06
TPM2YIL138C PAR32Q12515 295 aaKnown RBP2.21□□□□□ -2.06
TPM2YIL138C SPP41P38904 1435 aa2.2□□□□□ -2.06
TPM2YIL138C CDC21P06785 304 aa2.2□□□□□ -2.06
TPM2YIL138C MDL1P33310 695 aa2.2□□□□□ -2.06
TPM2YIL138C LRP1P38801 184 aaKnown RBP2.2□□□□□ -2.06
TPM2YIL138C GDI1P39958 451 aaKnown RBP2.2□□□□□ -2.06
TPM2YIL138C YER079WP40052 210 aaKnown RBP2.2□□□□□ -2.06
TPM2YIL138C SFH5P47008 294 aa2.2□□□□□ -2.06
TPM2YIL138C BRO1P48582 844 aa2.2□□□□□ -2.06
TPM2YIL138C ROG1P53118 685 aa2.2□□□□□ -2.06
TPM2YIL138C MDG1P53885 366 aa2.2□□□□□ -2.06
TPM2YIL138C VPS9P54787 451 aa2.2□□□□□ -2.06
TPM2YIL138C MMT1Q03218 510 aa2.2□□□□□ -2.06
TPM2YIL138C HER2Q03557 464 aa2.2□□□□□ -2.06
TPM2YIL138C CCE1Q03702 353 aa2.2□□□□□ -2.06
TPM2YIL138C PRP42Q03776 544 aaKnown RBP2.2□□□□□ -2.06
TPM2YIL138C RPN9Q04062 393 aaKnown RBP2.2□□□□□ -2.06
TPM2YIL138C SRL2Q12020 392 aa2.2□□□□□ -2.06
TPM2YIL138C RPN5Q12250 445 aaKnown RBP2.2□□□□□ -2.06
TPM2YIL138C YRM1Q12340 786 aa2.2□□□□□ -2.06
TPM2YIL138C SNQ2P32568 1501 aaKnown RBP2.2□□□□□ -2.06
TPM2YIL138C TSC11P40061 1430 aa2.19□□□□□ -2.06
TPM2YIL138C SNT2P53127 1403 aa2.19□□□□□ -2.06
TPM2YIL138C DST1P07273 309 aa2.19□□□□□ -2.06
TPM2YIL138C PCL1P24867 279 aa2.19□□□□□ -2.06
TPM2YIL138C DAL2P25335 343 aa2.19□□□□□ -2.06
TPM2YIL138C PHO91P27514 894 aa2.19□□□□□ -2.06
TPM2YIL138C HSP104P31539 908 aaKnown RBP2.19□□□□□ -2.06
TPM2YIL138C MNS1P32906 549 aa2.19□□□□□ -2.06
TPM2YIL138C INM1P38710 295 aa2.19□□□□□ -2.06
TPM2YIL138C STN1P38960 494 aa2.19□□□□□ -2.06
TPM2YIL138C YPS6P40583 537 aa2.19□□□□□ -2.06
TPM2YIL138C ERO1Q03103 563 aa2.19□□□□□ -2.06
TPM2YIL138C URH1Q04179 340 aa2.19□□□□□ -2.06
TPM2YIL138C BCH1Q05029 724 aa2.19□□□□□ -2.06
TPM2YIL138C SNT309Q06091 175 aaPredicted RBP2.19□□□□□ -2.06
TPM2YIL138C RRP9Q06506 573 aaKnown RBP2.19□□□□□ -2.06
TPM2YIL138C RUP1Q12242 671 aa2.19□□□□□ -2.06
TPM2YIL138C TPT1Q12272 230 aaKnown RBP2.19□□□□□ -2.06
TPM2YIL138C IKI3Q06706 1349 aaKnown RBP2.18□□□□□ -2.06
TPM2YIL138C TRM732Q03496 1420 aa2.18□□□□□ -2.06
TPM2YIL138C NUP170P38181 1502 aa2.18□□□□□ -2.06
TPM2YIL138C NAM2P11325 894 aa2.18□□□□□ -2.06
TPM2YIL138C ALG1P16661 449 aa2.18□□□□□ -2.06
TPM2YIL138C YCL068CP25593 260 aa2.18□□□□□ -2.06
TPM2YIL138C POP5P28005 173 aa2.18□□□□□ -2.06
TPM2YIL138C COX13P32799 129 aa2.18□□□□□ -2.06
TPM2YIL138C YKL097CP34245 136 aa2.18□□□□□ -2.06
TPM2YIL138C CHK1P38147 527 aa2.18□□□□□ -2.06
TPM2YIL138C MSG5P38590 489 aa2.18□□□□□ -2.06
TPM2YIL138C GPI16P38875 610 aa2.18□□□□□ -2.06
TPM2YIL138C COX14P39103 70 aa2.18□□□□□ -2.06
TPM2YIL138C MMF1P40185 145 aaKnown RBP2.18□□□□□ -2.06
TPM2YIL138C JEM1P40358 645 aa2.18□□□□□ -2.06
TPM2YIL138C MTM1P53320 366 aa2.18□□□□□ -2.06
TPM2YIL138C CWC25P53854 179 aaKnown RBP2.18□□□□□ -2.06
TPM2YIL138C PEX25Q02969 394 aa2.18□□□□□ -2.06
TPM2YIL138C NDE2Q07500 545 aa2.18□□□□□ -2.06
TPM2YIL138C NCA2Q12374 616 aa2.18□□□□□ -2.06
TPM2YIL138C STH1P32597 1359 aa2.18□□□□□ -2.06
TPM2YIL138C PAN1P32521 1480 aa2.18□□□□□ -2.06
TPM2YIL138C CYC3P06182 269 aa2.17□□□□□ -2.06
TPM2YIL138C NFT1P0CE68 1218 aa2.17□□□□□ -2.06
TPM2YIL138C RPL1AP0CX43 217 aaKnown RBP2.17□□□□□ -2.06
TPM2YIL138C RPL1BP0CX44 217 aaKnown RBP2.17□□□□□ -2.06
TPM2YIL138C SLM5P25345 492 aaKnown RBP2.17□□□□□ -2.06
TPM2YIL138C NIP1P32497 812 aaKnown RBP2.17□□□□□ -2.06
TPM2YIL138C NRP1P32770 719 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
TPM2YIL138C SKN1P33336 771 aa2.17□□□□□ -2.06
TPM2YIL138C RRP1P35178 278 aaPredicted RBP2.17□□□□□ -2.06
TPM2YIL138C STP2P38704 541 aa2.17□□□□□ -2.06
TPM2YIL138C JLP2P40206 208 aa2.17□□□□□ -2.06
TPM2YIL138C PAN6P40459 309 aa2.17□□□□□ -2.06
TPM2YIL138C SEC28P40509 296 aaKnown RBP2.17□□□□□ -2.06
TPM2YIL138C YIL029CP40538 142 aa2.17□□□□□ -2.06
TPM2YIL138C CHS6P40955 746 aa2.17□□□□□ -2.06
TPM2YIL138C TOS3P43637 560 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms