RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	ART10	P18634	518 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	GIT1	P25346	518 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	SPS19	P32573	292 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	GCG1	P32656	232 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	TOA2	P32774	122 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	BIG1	P38813	335 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	PLB1	P39105	664 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	PHO90	P39535	881 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	ASN2	P49090	572 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	PMT5	P52867	743 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	YGL108C	P53139	140 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	NOP19	P53317	196 aa	Predicted RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	TEX1	P53851	422 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	IPI3	P53877	555 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	MRP51	Q02950	344 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	YDR541C	Q03049	344 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	GFD1	Q04839	188 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	YDL144C	Q07589	356 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	YDL109C	Q12103	647 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	SWI1	P09547	1314 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	QCR7	P00128	127 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	SCEI	P03882	235 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	AMD2	P22580	549 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	RBK1	P25332	333 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	CDC20	P26309	610 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	GSY2	P27472	705 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	KRE2	P27809	442 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	BMH1	P29311	267 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	ACH1	P32316	526 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	ZUO1	P32527	433 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	ASH1	P34233	588 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	HES1	P35843	434 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	LDB7	P38210	180 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	SDH8	P38345	138 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.29	□□□□□ -1.88	not detected
TMA108	YIL137C	SUR2	P38992	349 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	UIP3	P39547	235 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	HXT9	P40885	567 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	IRC7	P43623	340 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	YFR057W	P43625	151 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	ATG27	P46989	271 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	NPA3	P47122	385 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	TOS2	P50078	622 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	CWC23	P52868	283 aa	Predicted RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	ARI1	P53111	347 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	ROG1	P53118	685 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	SLX9	P53251	210 aa	Predicted RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	BIO4	P53630	237 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	HXT11	P54862	567 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	RRP17	Q04031	235 aa	Predicted RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	DOT1	Q04089	582 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	YDR109C	Q04585	715 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	HOF1	Q05080	669 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	PAM18	Q07914	168 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	YOR223W	Q12015	292 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	MED2	Q12124	431 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	MSH5	Q12175	901 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	YLR108C	Q12259	485 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	TRM13	Q12383	476 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	UBA3	Q99344	299 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	FAS2	P19097	1887 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	PTP1	P25044	335 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	UBC8	P28263	218 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	SKT5	P34226	696 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	QDR3	P38227	689 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	UTP25	P40498	721 aa	Known RBP	3.29	□□□□□ -1.88
TMA108	YIL137C	TED1	P40533	473 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	DIP5	P53388	608 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	CDC14	Q00684	551 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.29	□□□□□ -1.88	not detected
TMA108	YIL137C	YMR087W	Q04299	284 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	DCR2	Q05924	578 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	ATG17	Q06410	417 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	ESA1	Q08649	445 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	YOR365C	Q08844	703 aa		3.29	□□□□□ -1.88
TMA108	YIL137C	MF(ALPHA)1	P01149	165 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	RPL24A	P04449	155 aa	Known RBP	3.28	□□□□□ -1.88
TMA108	YIL137C	RPL18A	P0CX49	186 aa	Known RBP	3.28	□□□□□ -1.88
TMA108	YIL137C	RPL18B	P0CX50	186 aa	Known RBP	3.28	□□□□□ -1.88
TMA108	YIL137C	RIM1	P32445	135 aa	Known RBP	3.28	□□□□□ -1.88
TMA108	YIL137C	PRP18	P33411	251 aa	Predicted RBP	3.28	□□□□□ -1.88
TMA108	YIL137C	EDC3	P39998	551 aa	Known RBP	3.28	□□□□□ -1.88
TMA108	YIL137C	ERG28	P40030	148 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	AGE2	P40529	298 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	IRC8	P47046	822 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	RPS7B	P48164	190 aa	Known RBP	3.28	□□□□□ -1.88
TMA108	YIL137C	MTR3	P48240	250 aa	Predicted RBP	3.28	□□□□□ -1.88
TMA108	YIL137C	MSE1	P48525	536 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	YGL082W	P53155	381 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	YIP3	P53633	176 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	SED5	Q01590	340 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	SPP2	Q02521	185 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	NAT4	Q04751	285 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	GAS5	Q08193	484 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	YPL216W	Q08964	1102 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	YLR415C	O13578	112 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	HEM1	P09950	548 aa	Predicted RBP	3.28	□□□□□ -1.88
TMA108	YIL137C	YAK1	P14680	807 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	CBS2	P14905	389 aa		3.28	□□□□□ -1.88
TMA108	YIL137C	COQ1	P18900	473 aa		3.28	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms