RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W YMR254CQ04838 102 aa3.4□□□□□ -1.87
CTM1YHR109W THI7Q05998 598 aa3.4□□□□□ -1.87
CTM1YHR109W SRL2Q12020 392 aa3.4□□□□□ -1.87
CTM1YHR109W YIL002W-AQ3E7Z5 69 aa3.4□□□□□ -1.87
CTM1YHR109W TEF1P02994 458 aaKnown RBP3.39□□□□□ -1.87
CTM1YHR109W YLL053CP0CD98 152 aa3.39□□□□□ -1.87
CTM1YHR109W RPS16AP0CX51 143 aaKnown RBP3.39□□□□□ -1.87
CTM1YHR109W RPS16BP0CX52 143 aaKnown RBP3.39□□□□□ -1.87
CTM1YHR109W ARF1P11076 181 aaKnown RBP3.39□□□□□ -1.87
CTM1YHR109W PRP16P15938 1071 aaPredicted RBP3.39□□□□□ -1.87
CTM1YHR109W SAM2P19358 384 aaKnown RBP3.39□□□□□ -1.87
CTM1YHR109W HNM1P19807 563 aa3.39□□□□□ -1.87
CTM1YHR109W YPS1P32329 569 aa3.39□□□□□ -1.87
CTM1YHR109W DOA1P36037 715 aa3.39□□□□□ -1.87
CTM1YHR109W DBP6P53734 629 aaKnown RBP3.39□□□□□ -1.87
CTM1YHR109W ODC1Q03028 310 aa3.39□□□□□ -1.87
CTM1YHR109W RIM13Q03792 727 aa3.39□□□□□ -1.87
CTM1YHR109W GRX3Q03835 250 aa3.39□□□□□ -1.87
CTM1YHR109W VPS74Q06385 345 aa3.39□□□□□ -1.87
CTM1YHR109W YEH2Q07950 538 aa3.39□□□□□ -1.87
CTM1YHR109W YAP7Q08182 245 aa3.39□□□□□ -1.87
CTM1YHR109W ARG4P04076 463 aaPredicted RBP3.38□□□□□ -1.87
CTM1YHR109W TPK3P05986 398 aa3.38□□□□□ -1.87
CTM1YHR109W RNA1P11745 407 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W UGA1P17649 471 aa3.38□□□□□ -1.87
CTM1YHR109W CKI1P20485 582 aa3.38□□□□□ -1.87
CTM1YHR109W YCP4P25349 247 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W GLC7P32598 312 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W YUH1P35127 236 aa3.38□□□□□ -1.87
CTM1YHR109W ATP3P38077 311 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W RRP3P38712 501 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W PCL6P40038 420 aa3.38□□□□□ -1.87
CTM1YHR109W YJL070CP40361 888 aa3.38□□□□□ -1.87
CTM1YHR109W SIM1P40472 476 aa3.38□□□□□ -1.87
CTM1YHR109W RET3P53600 189 aa3.38□□□□□ -1.87
CTM1YHR109W YNR048WP53740 393 aa3.38□□□□□ -1.87
CTM1YHR109W TIM11P81449 96 aaPredicted RBP3.38□□□□□ -1.87
CTM1YHR109W YMR034CQ05131 434 aaPredicted RBP3.38□□□□□ -1.87
CTM1YHR109W RRT8Q08219 342 aa3.38□□□□□ -1.87
CTM1YHR109W TIM18Q08749 192 aa3.38□□□□□ -1.87
CTM1YHR109W ATP1P07251 545 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W RPL18AP0CX49 186 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W RPL18BP0CX50 186 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W TIP1P27654 210 aaPredicted RBP3.38□□□□□ -1.87
CTM1YHR109W RAD23P32628 398 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W COX13P32799 129 aa3.38□□□□□ -1.87
CTM1YHR109W BUD2P33314 1104 aa3.38□□□□□ -1.87
CTM1YHR109W SPT10P35208 640 aa3.38□□□□□ -1.87
CTM1YHR109W MRPL37P36532 105 aa3.38□□□□□ -1.87
CTM1YHR109W RTC2P38279 296 aa3.38□□□□□ -1.87
CTM1YHR109W YHR122WP38829 231 aa3.38□□□□□ -1.87
CTM1YHR109W HAT2P39984 401 aa3.38□□□□□ -1.87
CTM1YHR109W POP6P53218 158 aa3.38□□□□□ -1.87
CTM1YHR109W CWC22P53333 577 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W RRN5Q02983 363 aa3.38□□□□□ -1.87
CTM1YHR109W PIR3Q03180 325 aa3.38□□□□□ -1.87
CTM1YHR109W KAP95Q06142 861 aaKnown RBP3.38□□□□□ -1.87
CTM1YHR109W NCA2Q12374 616 aa3.38□□□□□ -1.87
CTM1YHR109W YOR338WQ99326 363 aa3.38□□□□□ -1.87
CTM1YHR109W YFL068WP0CX99 160 aa3.37□□□□□ -1.87
CTM1YHR109W YLL066W-AP0CY00 160 aa3.37□□□□□ -1.87
CTM1YHR109W YLL067W-AP0CY01 160 aa3.37□□□□□ -1.87
CTM1YHR109W CLN3P13365 580 aa3.37□□□□□ -1.87
CTM1YHR109W SLY1P22213 666 aa3.37□□□□□ -1.87
CTM1YHR109W CIN8P27895 1000 aa3.37□□□□□ -1.87
CTM1YHR109W TRS65P32893 560 aa3.37□□□□□ -1.87
CTM1YHR109W YKL070WP36087 169 aa3.37□□□□□ -1.87
CTM1YHR109W SHO1P40073 367 aa3.37□□□□□ -1.87
CTM1YHR109W LYS12P40495 371 aaKnown RBP3.37□□□□□ -1.87
CTM1YHR109W PSA1P41940 361 aaKnown RBP3.37□□□□□ -1.87
CTM1YHR109W TOS3P43637 560 aa3.37□□□□□ -1.87
CTM1YHR109W MDV1P47025 714 aa3.37□□□□□ -1.87
CTM1YHR109W IKS1P47042 667 aa3.37□□□□□ -1.87
CTM1YHR109W SPR6Q01684 191 aa3.37□□□□□ -1.87
CTM1YHR109W VAC14Q06708 880 aa3.37□□□□□ -1.87
CTM1YHR109W RLP24Q07915 199 aaKnown RBP3.37□□□□□ -1.87
CTM1YHR109W SGT1Q08446 395 aa3.37□□□□□ -1.87
CTM1YHR109W PAA1Q12447 191 aaKnown RBP3.37□□□□□ -1.87
CTM1YHR109W ATS1P31386 333 aa3.36□□□□□ -1.87
CTM1YHR109W ZUO1P32527 433 aaKnown RBP3.36□□□□□ -1.87
CTM1YHR109W PAD1P33751 242 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
CTM1YHR109W YIR014WP40570 242 aa3.36□□□□□ -1.87
CTM1YHR109W LAM5P43560 674 aa3.36□□□□□ -1.87
CTM1YHR109W RRT5P43607 289 aa3.36□□□□□ -1.87
CTM1YHR109W AZR1P50080 613 aa3.36□□□□□ -1.87
CTM1YHR109W MRP51Q02950 344 aa3.36□□□□□ -1.87
CTM1YHR109W SEG1Q04279 960 aa3.36□□□□□ -1.87
CTM1YHR109W MUM3Q08750 479 aa3.36□□□□□ -1.87
CTM1YHR109W YDR262WQ12331 272 aa3.36□□□□□ -1.87
CTM1YHR109W CAR2P07991 424 aaKnown RBP3.35□□□□□ -1.87
CTM1YHR109W MXR2P25566 168 aa3.35□□□□□ -1.87
CTM1YHR109W TOA2P32774 122 aa3.35□□□□□ -1.87
CTM1YHR109W PTR2P32901 601 aa3.35□□□□□ -1.87
CTM1YHR109W LOS1P33418 1100 aaPredicted RBP3.35□□□□□ -1.87
CTM1YHR109W EBP2P36049 427 aaKnown RBP3.35□□□□□ -1.87
CTM1YHR109W AGX1P43567 385 aa3.35□□□□□ -1.87
CTM1YHR109W MND1P53102 219 aa3.35□□□□□ -1.87
CTM1YHR109W VOA1P53262 265 aa3.35□□□□□ -1.87
CTM1YHR109W YGR266WP53326 701 aa3.35□□□□□ -1.87
CTM1YHR109W RRN9P53437 365 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms