RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W RIM13Q03792 727 aa14.29□□□□□ -0.12
RTC3YHR087W ARP10Q04549 284 aa14.29□□□□□ -0.12
RTC3YHR087W MSH5Q12175 901 aa14.29□□□□□ -0.12
RTC3YHR087W MET17P06106 444 aa14.28□□□□□ -0.12
RTC3YHR087W ZWF1P11412 505 aaKnown RBP14.28□□□□□ -0.12
RTC3YHR087W IDH1P28834 360 aaKnown RBP RIP-Chip data14.28□□□□□ -0.12not detected
RTC3YHR087W MKK1P32490 508 aa14.28□□□□□ -0.12
RTC3YHR087W AIM2P39721 246 aa14.28□□□□□ -0.12
RTC3YHR087W TIF34P40217 347 aaKnown RBP14.28□□□□□ -0.12
RTC3YHR087W YGR079WP53249 370 aa14.28□□□□□ -0.12
RTC3YHR087W MSC1Q03104 513 aa14.28□□□□□ -0.12
RTC3YHR087W YMR310CQ04867 317 aaPredicted RBP14.28□□□□□ -0.12
RTC3YHR087W RTK1Q12100 620 aaPredicted RBP14.28□□□□□ -0.12
RTC3YHR087W YOL107WQ12239 342 aa14.28□□□□□ -0.12
RTC3YHR087W YLR126CQ12288 251 aa14.28□□□□□ -0.12
RTC3YHR087W CSF1Q12150 2958 aa14.28□□□□□ -0.12
RTC3YHR087W CLB2P24869 491 aa14.27□□□□□ -0.13
RTC3YHR087W NTH1P32356 751 aa14.27□□□□□ -0.13
RTC3YHR087W DOM34P33309 386 aa14.27□□□□□ -0.13
RTC3YHR087W OAR1P35731 278 aa14.27□□□□□ -0.13
RTC3YHR087W MAE1P36013 669 aaKnown RBP14.27□□□□□ -0.13
RTC3YHR087W LEU5P38702 357 aa14.27□□□□□ -0.13
RTC3YHR087W PAC11P40960 533 aa14.27□□□□□ -0.13
RTC3YHR087W UBC9P50623 157 aaPredicted RBP14.27□□□□□ -0.13
RTC3YHR087W YNL181WP53878 407 aa14.27□□□□□ -0.13
RTC3YHR087W HXT15P54854 567 aa14.27□□□□□ -0.13
RTC3YHR087W RSC9Q03124 581 aa14.27□□□□□ -0.13
RTC3YHR087W YPL066WQ12194 479 aa14.27□□□□□ -0.13
RTC3YHR087W GAL7P08431 366 aa14.26□□□□□ -0.13
RTC3YHR087W MRPL32P25348 183 aa14.26□□□□□ -0.13
RTC3YHR087W SNM1P40993 198 aa14.26□□□□□ -0.13
RTC3YHR087W TWF1P53250 332 aa14.26□□□□□ -0.13
RTC3YHR087W RHO4Q00246 291 aa14.26□□□□□ -0.13
RTC3YHR087W ISR1Q06098 443 aaKnown RBP14.26□□□□□ -0.13
RTC3YHR087W DIN7Q12086 430 aa14.26□□□□□ -0.13
RTC3YHR087W NFI1Q12216 726 aa14.26□□□□□ -0.13
RTC3YHR087W PST2Q12335 198 aaKnown RBP14.26□□□□□ -0.13
RTC3YHR087W TFS1P14306 219 aa14.25□□□□□ -0.13
RTC3YHR087W AHP1P38013 176 aaKnown RBP14.25□□□□□ -0.13
RTC3YHR087W ELO1P39540 310 aa14.25□□□□□ -0.13
RTC3YHR087W NEO1P40527 1151 aa14.25□□□□□ -0.13
RTC3YHR087W CSL4P53859 292 aaPredicted RBP14.25□□□□□ -0.13
RTC3YHR087W TFB3Q03290 321 aa14.25□□□□□ -0.13
RTC3YHR087W GAL83Q04739 417 aa14.25□□□□□ -0.13
RTC3YHR087W RNH1Q04740 348 aa14.25□□□□□ -0.13
RTC3YHR087W BOP2Q06150 570 aa14.25□□□□□ -0.13
RTC3YHR087W LAG2Q92325 660 aa14.25□□□□□ -0.13
RTC3YHR087W STT4P37297 1900 aa14.24□□□□□ -0.13
RTC3YHR087W RED1P14291 827 aa14.24□□□□□ -0.13
RTC3YHR087W GSH1P32477 678 aa14.24□□□□□ -0.13
RTC3YHR087W FMP46P36141 133 aaKnown RBP14.24□□□□□ -0.13
RTC3YHR087W BIG1P38813 335 aa14.24□□□□□ -0.13
RTC3YHR087W YPS6P40583 537 aa14.24□□□□□ -0.13
RTC3YHR087W MRPS18P42847 217 aa14.24□□□□□ -0.13
RTC3YHR087W YFL066CP43538 392 aa14.24□□□□□ -0.13
RTC3YHR087W SNF12P53628 566 aa14.24□□□□□ -0.13
RTC3YHR087W EGD1Q02642 157 aaKnown RBP14.24□□□□□ -0.13
RTC3YHR087W KRE28Q04431 385 aa14.24□□□□□ -0.13
RTC3YHR087W RSF1Q05043 376 aa14.24□□□□□ -0.13
RTC3YHR087W YDL114WQ07530 308 aa14.24□□□□□ -0.13
RTC3YHR087W FMP45Q07651 309 aa14.24□□□□□ -0.13
RTC3YHR087W RPN8Q08723 338 aaKnown RBP14.24□□□□□ -0.13
RTC3YHR087W PNO1Q99216 274 aaKnown RBP14.24□□□□□ -0.13
RTC3YHR087W POL2P21951 2222 aaKnown RBP14.24□□□□□ -0.13
RTC3YHR087W REP1P03871 373 aa14.23□□□□□ -0.13
RTC3YHR087W SLY41P22215 453 aa14.23□□□□□ -0.13
RTC3YHR087W ASF2P32448 525 aaPredicted RBP14.23□□□□□ -0.13
RTC3YHR087W RPN2P32565 945 aaKnown RBP14.23□□□□□ -0.13
RTC3YHR087W SFA1P32771 386 aa14.23□□□□□ -0.13
RTC3YHR087W CDC13P32797 924 aaKnown RBP14.23□□□□□ -0.13
RTC3YHR087W TEF4P36008 412 aaKnown RBP14.23□□□□□ -0.13
RTC3YHR087W OMA1P36163 345 aa14.23□□□□□ -0.13
RTC3YHR087W AST2P39945 430 aaKnown RBP14.23□□□□□ -0.13
RTC3YHR087W SOK1P40317 901 aa14.23□□□□□ -0.13
RTC3YHR087W LRO1P40345 661 aa14.23□□□□□ -0.13
RTC3YHR087W MNN10P50108 393 aaKnown RBP14.23□□□□□ -0.13
RTC3YHR087W SWS2P53937 143 aa14.23□□□□□ -0.13
RTC3YHR087W RRP17Q04031 235 aaPredicted RBP14.23□□□□□ -0.13
RTC3YHR087W YLR345WQ06137 509 aa14.23□□□□□ -0.13
RTC3YHR087W MCM21Q06675 368 aa14.23□□□□□ -0.13
RTC3YHR087W NTG2Q08214 380 aa14.23□□□□□ -0.13
RTC3YHR087W GLO4Q12320 285 aa14.23□□□□□ -0.13
RTC3YHR087W YKL033W-AQ86ZR7 236 aa14.23□□□□□ -0.13
RTC3YHR087W PET9P18239 318 aaKnown RBP14.22□□□□□ -0.13
RTC3YHR087W AGP1P25376 633 aa14.22□□□□□ -0.13
RTC3YHR087W SUI1P32911 108 aaKnown RBP14.22□□□□□ -0.13
RTC3YHR087W AMN1P38285 549 aaPredicted RBP14.22□□□□□ -0.13
RTC3YHR087W LYS1P38998 373 aaRIP-Chip data14.22□□□□□ -0.13not detected
RTC3YHR087W YMD8Q03697 442 aa14.22□□□□□ -0.13
RTC3YHR087W YFT2Q06676 274 aa14.22□□□□□ -0.13
RTC3YHR087W BSC1Q12140 328 aa14.22□□□□□ -0.13
RTC3YHR087W NPR1P22211 790 aa14.21□□□□□ -0.13
RTC3YHR087W YPK3P38070 525 aa14.21□□□□□ -0.13
RTC3YHR087W YER158CP40095 573 aa14.21□□□□□ -0.13
RTC3YHR087W DUG1P43616 481 aaKnown RBP14.21□□□□□ -0.13
RTC3YHR087W YGR168CP53293 376 aa14.21□□□□□ -0.13
RTC3YHR087W YML096WQ04489 525 aa14.21□□□□□ -0.13
RTC3YHR087W IRC13Q08630 104 aa14.21□□□□□ -0.13
RTC3YHR087W LEU9Q12166 604 aaKnown RBP14.21□□□□□ -0.13
RTC3YHR087W IES3Q12345 250 aa14.21□□□□□ -0.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms