RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W RNH203Q12338 110 aa4.49□□□□□ -1.69
DEG1YFL001W ORT1Q12375 292 aa4.49□□□□□ -1.69
DEG1YFL001W RMD5Q12508 421 aa4.49□□□□□ -1.69
DEG1YFL001W YNL162W-AQ3E7A8 72 aa4.49□□□□□ -1.69
DEG1YFL001W DST1P07273 309 aa4.48□□□□□ -1.69
DEG1YFL001W DBP3P20447 523 aaKnown RBP4.48□□□□□ -1.69
DEG1YFL001W RGT1P32862 1170 aa4.48□□□□□ -1.69
DEG1YFL001W FRE2P36033 711 aa4.48□□□□□ -1.69
DEG1YFL001W RSM22P36056 628 aa4.48□□□□□ -1.69
DEG1YFL001W RRP3P38712 501 aaKnown RBP4.48□□□□□ -1.69
DEG1YFL001W LIN1P38852 340 aaPredicted RBP4.48□□□□□ -1.69
DEG1YFL001W YER079WP40052 210 aaKnown RBP4.48□□□□□ -1.69
DEG1YFL001W RTT105P40063 208 aa4.48□□□□□ -1.69
DEG1YFL001W MDV1P47025 714 aa4.48□□□□□ -1.69
DEG1YFL001W ARP5P53946 755 aa4.48□□□□□ -1.69
DEG1YFL001W RLI1Q03195 608 aaKnown RBP4.48□□□□□ -1.69
DEG1YFL001W MMT1Q03218 510 aa4.48□□□□□ -1.69
DEG1YFL001W URC2Q04411 772 aa4.48□□□□□ -1.69
DEG1YFL001W AAD15Q08361 143 aa4.48□□□□□ -1.69
DEG1YFL001W YAR066WP0CX18 203 aa4.47□□□□□ -1.69
DEG1YFL001W YHR214WP0CX19 203 aa4.47□□□□□ -1.69
DEG1YFL001W YFL068WP0CX99 160 aa4.47□□□□□ -1.69
DEG1YFL001W YLL066W-AP0CY00 160 aa4.47□□□□□ -1.69
DEG1YFL001W YLL067W-AP0CY01 160 aa4.47□□□□□ -1.69
DEG1YFL001W THR4P16120 514 aaKnown RBP4.47□□□□□ -1.69
DEG1YFL001W YCR100CP25606 316 aa4.47□□□□□ -1.69
DEG1YFL001W PEX2P32800 271 aa4.47□□□□□ -1.69
DEG1YFL001W SIP2P34164 415 aaKnown RBP4.47□□□□□ -1.69
DEG1YFL001W YHR177WP38867 453 aa4.47□□□□□ -1.69
DEG1YFL001W YIR014WP40570 242 aa4.47□□□□□ -1.69
DEG1YFL001W AZF1P41696 914 aa4.47□□□□□ -1.69
DEG1YFL001W GWT1P47026 490 aa4.47□□□□□ -1.69
DEG1YFL001W ARK1P53974 638 aa4.47□□□□□ -1.69
DEG1YFL001W ODC1Q03028 310 aa4.47□□□□□ -1.69
DEG1YFL001W MRPL1Q04599 285 aa4.47□□□□□ -1.69
DEG1YFL001W SMA2Q04658 369 aa4.47□□□□□ -1.69
DEG1YFL001W MSC3Q05812 728 aa4.47□□□□□ -1.69
DEG1YFL001W THI7Q05998 598 aa4.47□□□□□ -1.69
DEG1YFL001W RRP36Q12481 300 aaPredicted RBP4.47□□□□□ -1.69
DEG1YFL001W CBP2P03874 630 aaPredicted RBP4.46□□□□□ -1.69
DEG1YFL001W RPL12AP0CX53 165 aaKnown RBP4.46□□□□□ -1.69
DEG1YFL001W RPL12BP0CX54 165 aa4.46□□□□□ -1.69
DEG1YFL001W PRP16P15938 1071 aaPredicted RBP4.46□□□□□ -1.69
DEG1YFL001W LSB5P25369 354 aa4.46□□□□□ -1.69
DEG1YFL001W SSE1P32589 693 aaKnown RBP4.46□□□□□ -1.69
DEG1YFL001W MRPL40P36534 297 aa4.46□□□□□ -1.69
DEG1YFL001W XBP1P40489 647 aa4.46□□□□□ -1.69
DEG1YFL001W PMT5P52867 743 aa4.46□□□□□ -1.69
DEG1YFL001W YNR048WP53740 393 aa4.46□□□□□ -1.69
DEG1YFL001W FRE4P53746 719 aa4.46□□□□□ -1.69
DEG1YFL001W STD1Q02794 444 aa4.46□□□□□ -1.69
DEG1YFL001W ABZ2Q03266 374 aa4.46□□□□□ -1.69
DEG1YFL001W RSN1Q03516 953 aa4.46□□□□□ -1.69
DEG1YFL001W ECM7Q06200 448 aa4.46□□□□□ -1.69
DEG1YFL001W PEX27Q08580 376 aa4.46□□□□□ -1.69
DEG1YFL001W ARG4P04076 463 aaPredicted RBP4.46□□□□□ -1.7
DEG1YFL001W SPO12P17123 173 aa4.46□□□□□ -1.7
DEG1YFL001W GLN3P18494 730 aa4.46□□□□□ -1.7
DEG1YFL001W PPQ1P32945 549 aa4.46□□□□□ -1.7
DEG1YFL001W SKN1P33336 771 aa4.46□□□□□ -1.7
DEG1YFL001W PTK1P36002 662 aaPredicted RBP4.46□□□□□ -1.7
DEG1YFL001W CUE2P36075 443 aaKnown RBP4.46□□□□□ -1.7
DEG1YFL001W YIR016WP40572 265 aa4.46□□□□□ -1.7
DEG1YFL001W MKT1P40850 830 aaKnown RBP4.46□□□□□ -1.7
DEG1YFL001W BNA3P47039 444 aaKnown RBP4.46□□□□□ -1.7
DEG1YFL001W RRP46P53256 223 aaPredicted RBP4.46□□□□□ -1.7
DEG1YFL001W YDR415CQ04033 374 aaPredicted RBP4.46□□□□□ -1.7
DEG1YFL001W SRL2Q12020 392 aa4.46□□□□□ -1.7
DEG1YFL001W YPR022CQ12139 1133 aa4.46□□□□□ -1.7
DEG1YFL001W YOR012WQ12351 137 aa4.46□□□□□ -1.7
DEG1YFL001W YOR093CQ12275 1648 aa4.45□□□□□ -1.7
DEG1YFL001W OPI3P05375 206 aa4.45□□□□□ -1.7
DEG1YFL001W GCD2P12754 651 aaPredicted RBP4.45□□□□□ -1.7
DEG1YFL001W RIB7P33312 244 aa4.45□□□□□ -1.7
DEG1YFL001W SPT10P35208 640 aa4.45□□□□□ -1.7
DEG1YFL001W EBP2P36049 427 aaKnown RBP4.45□□□□□ -1.7
DEG1YFL001W YBR139WP38109 508 aa4.45□□□□□ -1.7
DEG1YFL001W SSO2P39926 295 aa4.45□□□□□ -1.7
DEG1YFL001W HAT2P39984 401 aa4.45□□□□□ -1.7
DEG1YFL001W YIL152WP40455 235 aa4.45□□□□□ -1.7
DEG1YFL001W GCD10P41814 478 aa4.45□□□□□ -1.7
DEG1YFL001W PHB2P50085 310 aa4.45□□□□□ -1.7
DEG1YFL001W RPM2Q02773 1202 aa4.45□□□□□ -1.7
DEG1YFL001W YPR078CQ06813 372 aa4.45□□□□□ -1.7
DEG1YFL001W GCN2P15442 1659 aa4.44□□□□□ -1.7
DEG1YFL001W CDC37P06101 506 aaKnown RBP4.44□□□□□ -1.7
DEG1YFL001W OM45P16547 393 aa4.44□□□□□ -1.7
DEG1YFL001W SLM5P25345 492 aaKnown RBP4.44□□□□□ -1.7
DEG1YFL001W PET18P25362 215 aa4.44□□□□□ -1.7
DEG1YFL001W TIP1P27654 210 aaPredicted RBP4.44□□□□□ -1.7
DEG1YFL001W MMF1P40185 145 aaKnown RBP4.44□□□□□ -1.7
DEG1YFL001W PCI8P40512 444 aa4.44□□□□□ -1.7
DEG1YFL001W SPG5P42933 373 aa4.44□□□□□ -1.7
DEG1YFL001W STE24P47154 453 aa4.44□□□□□ -1.7
DEG1YFL001W MPS1P54199 764 aa4.44□□□□□ -1.7
DEG1YFL001W STP1Q00947 519 aa4.44□□□□□ -1.7
DEG1YFL001W BET5Q03630 159 aa4.44□□□□□ -1.7
DEG1YFL001W YMR310CQ04867 317 aaPredicted RBP4.44□□□□□ -1.7
DEG1YFL001W DSE3Q08729 430 aa4.44□□□□□ -1.7
DEG1YFL001W PKH2Q12236 1081 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms