RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	GAS3	Q03655	524 aa		0.94	□□□□□ -2.26
UBP3	YER151C	RVB1	Q03940	463 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	TRI1	Q05024	226 aa		0.94	□□□□□ -2.26
UBP3	YER151C	HIM1	Q06674	414 aa		0.94	□□□□□ -2.26
UBP3	YER151C	TSR1	Q07381	788 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	YPL272C	Q08984	517 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YDL211C	Q12121	372 aa		0.94	□□□□□ -2.26
UBP3	YER151C	UBX3	Q12229	455 aa		0.94	□□□□□ -2.26
UBP3	YER151C	ATG34	Q12292	412 aa		0.94	□□□□□ -2.26
UBP3	YER151C	PRR2	Q12310	699 aa		0.94	□□□□□ -2.26
UBP3	YER151C	APC2	Q12440	853 aa		0.94	□□□□□ -2.26
UBP3	YER151C	MTR10	Q99189	972 aa		0.94	□□□□□ -2.26
UBP3	YER151C	BCY1	P07278	416 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	MET2	P08465	486 aa		0.93	□□□□□ -2.26
UBP3	YER151C	GPA1	P08539	472 aa		0.93	□□□□□ -2.26
UBP3	YER151C	CBS1	P14066	229 aa		0.93	□□□□□ -2.26
UBP3	YER151C	GRX2	P17695	143 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	KGD1	P20967	1014 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	SIR1	P21691	654 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YSR3	P23501	404 aa		0.93	□□□□□ -2.26
UBP3	YER151C	RIT1	P23796	513 aa		0.93	□□□□□ -2.26
UBP3	YER151C	SLM5	P25345	492 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	COQ3	P27680	312 aa		0.93	□□□□□ -2.26
UBP3	YER151C	TPS2	P31688	896 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	ARP2	P32381	391 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	SPS19	P32573	292 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	RAD5	P32849	1169 aa	Predicted RBP	0.93	□□□□□ -2.26
UBP3	YER151C	XRS2	P33301	854 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YKL100C	P34248	587 aa		0.93	□□□□□ -2.26
UBP3	YER151C	LHS1	P36016	881 aa		0.93	□□□□□ -2.26
UBP3	YER151C	RPC37	P36121	282 aa		0.93	□□□□□ -2.26
UBP3	YER151C	EMP65	P40085	556 aa		0.93	□□□□□ -2.26
UBP3	YER151C	RSM25	P40496	264 aa		0.93	□□□□□ -2.26
UBP3	YER151C	SYG1	P40528	902 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YGL260W	P53056	76 aa		0.93	□□□□□ -2.26
UBP3	YER151C	DUO1	P53168	247 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	PCP1	P53259	346 aa		0.93	□□□□□ -2.26
UBP3	YER151C	CPR6	P53691	371 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	VPS9	P54787	451 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YPL071C	Q02864	156 aa		0.93	□□□□□ -2.26
UBP3	YER151C	SEC13	Q04491	297 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	MDM30	Q05930	598 aa		0.93	□□□□□ -2.26
UBP3	YER151C	ATG26	Q06321	1198 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YLR042C	Q07990	161 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YOR365C	Q08844	703 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YLR112W	Q12130	139 aa		0.93	□□□□□ -2.26
UBP3	YER151C	COX4	P04037	155 aa		0.93	□□□□□ -2.26
UBP3	YER151C	MATALPHA2	P0CY08	210 aa		0.93	□□□□□ -2.26
UBP3	YER151C	HMLALPHA2	P0CY09	210 aa		0.93	□□□□□ -2.26
UBP3	YER151C	SEC12	P11655	471 aa		0.93	□□□□□ -2.26
UBP3	YER151C	UTR1	P21373	530 aa		0.93	□□□□□ -2.26
UBP3	YER151C	CNA1	P23287	553 aa		0.93	□□□□□ -2.26
UBP3	YER151C	PTC6	P25646	442 aa		0.93	□□□□□ -2.26
UBP3	YER151C	SPC110	P32380	944 aa		0.93	□□□□□ -2.26
UBP3	YER151C	MNN2	P38069	597 aa		0.93	□□□□□ -2.26
UBP3	YER151C	ARA1	P38115	344 aa		0.93	□□□□□ -2.26
UBP3	YER151C	BMT2	P38278	337 aa		0.93	□□□□□ -2.26
UBP3	YER151C	GGC1	P38988	300 aa		0.93	□□□□□ -2.26
UBP3	YER151C	PSD1	P39006	500 aa		0.93	□□□□□ -2.26
UBP3	YER151C	SSP120	P39931	234 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	YER188W	P40103	239 aa		0.93	□□□□□ -2.26
UBP3	YER151C	COA1	P40452	197 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YPS6	P40583	537 aa		0.93	□□□□□ -2.26
UBP3	YER151C	HXT9	P40885	567 aa		0.93	□□□□□ -2.26
UBP3	YER151C	CIR1	P42940	261 aa		0.93	□□□□□ -2.26
UBP3	YER151C	MIC19	P43594	170 aa		0.93	□□□□□ -2.26
UBP3	YER151C	MSY1	P48527	492 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YGL185C	P53100	379 aa		0.93	□□□□□ -2.26
UBP3	YER151C	SWC4	P53201	476 aa		0.93	□□□□□ -2.26
UBP3	YER151C	COG2	P53271	262 aa		0.93	□□□□□ -2.26
UBP3	YER151C	RTT102	P53330	157 aa		0.93	□□□□□ -2.26
UBP3	YER151C	VTC3	Q02725	835 aa		0.93	□□□□□ -2.26
UBP3	YER151C	IRC15	Q02733	499 aa		0.93	□□□□□ -2.26
UBP3	YER151C	URH1	Q04179	340 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YMR034C	Q05131	434 aa	Predicted RBP	0.93	□□□□□ -2.26
UBP3	YER151C	CRD1	Q07560	283 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	0.93	□□□□□ -2.26	RIP-Chip
UBP3	YER151C	MLH2	Q07980	695 aa		0.93	□□□□□ -2.26
UBP3	YER151C	RIM20	Q12033	661 aa		0.93	□□□□□ -2.26
UBP3	YER151C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	0.93	□□□□□ -2.26	not detected
UBP3	YER151C	PKH2	Q12236	1081 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	SFG1	Q12507	346 aa		0.93	□□□□□ -2.26
UBP3	YER151C	YBR126W-A	Q8TGU7	68 aa		0.93	□□□□□ -2.26
UBP3	YER151C	MDN1	Q12019	4910 aa	Known RBP	0.93	□□□□□ -2.26
UBP3	YER151C	RAD1	P06777	1100 aa		0.92	□□□□□ -2.26
UBP3	YER151C	GAL3	P13045	520 aa		0.92	□□□□□ -2.26
UBP3	YER151C	THR4	P16120	514 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	ATS1	P31386	333 aa		0.92	□□□□□ -2.26
UBP3	YER151C	ACP1	P32463	125 aa		0.92	□□□□□ -2.26
UBP3	YER151C	RPN2	P32565	945 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	SMI1	P32566	505 aa		0.92	□□□□□ -2.26
UBP3	YER151C	RPT3	P33298	428 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	HES1	P35843	434 aa		0.92	□□□□□ -2.26
UBP3	YER151C	FMP46	P36141	133 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	YLF2	P38746	405 aa		0.92	□□□□□ -2.26
UBP3	YER151C	GAA1	P39012	614 aa		0.92	□□□□□ -2.26
UBP3	YER151C	ICE2	P40499	491 aa		0.92	□□□□□ -2.26
UBP3	YER151C	SWP82	P43554	623 aa		0.92	□□□□□ -2.26
UBP3	YER151C	KAP114	P53067	1004 aa		0.92	□□□□□ -2.26
UBP3	YER151C	PRP38	Q00723	242 aa	Predicted RBP	0.92	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms