RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W RIB4P50861 169 aaPredicted RBP4.71□□□□□ -1.66
UBC6YER100W FRE4P53746 719 aa4.71□□□□□ -1.66
UBC6YER100W RPL15BP54780 204 aaPredicted RBP4.71□□□□□ -1.66
UBC6YER100W BET4Q00618 327 aa4.71□□□□□ -1.66
UBC6YER100W APC4Q04601 652 aa4.71□□□□□ -1.66
UBC6YER100W RNH1Q04740 348 aa4.71□□□□□ -1.66
UBC6YER100W YMR254CQ04838 102 aa4.71□□□□□ -1.66
UBC6YER100W VAC14Q06708 880 aa4.71□□□□□ -1.66
UBC6YER100W LDS2Q08218 356 aa4.71□□□□□ -1.66
UBC6YER100W LDB17Q12342 491 aa4.71□□□□□ -1.66
UBC6YER100W DCP1Q12517 231 aaPredicted RBP4.71□□□□□ -1.66
UBC6YER100W FSH3Q99369 266 aa4.71□□□□□ -1.66
UBC6YER100W UGA1P17649 471 aa4.7□□□□□ -1.66
UBC6YER100W DBR1P24309 405 aaKnown RBP4.7□□□□□ -1.66
UBC6YER100W TIP1P27654 210 aaPredicted RBP4.7□□□□□ -1.66
UBC6YER100W ERG1P32476 496 aaKnown RBP4.7□□□□□ -1.66
UBC6YER100W SKT5P34226 696 aa4.7□□□□□ -1.66
UBC6YER100W YUH1P35127 236 aa4.7□□□□□ -1.66
UBC6YER100W SCO2P38072 301 aa4.7□□□□□ -1.66
UBC6YER100W BZZ1P38822 633 aa4.7□□□□□ -1.66
UBC6YER100W PRP39P39682 629 aaKnown RBP4.7□□□□□ -1.66
UBC6YER100W VPS52P39904 641 aa4.7□□□□□ -1.66
UBC6YER100W YJL070CP40361 888 aa4.7□□□□□ -1.66
UBC6YER100W LYS12P40495 371 aaKnown RBP4.7□□□□□ -1.66
UBC6YER100W GWT1P47026 490 aa4.7□□□□□ -1.66
UBC6YER100W GTO1P48239 356 aa4.7□□□□□ -1.66
UBC6YER100W NUP84P52891 726 aa4.7□□□□□ -1.66
UBC6YER100W VOA1P53262 265 aa4.7□□□□□ -1.66
UBC6YER100W DBP6P53734 629 aaKnown RBP4.7□□□□□ -1.66
UBC6YER100W MRP51Q02950 344 aa4.7□□□□□ -1.66
UBC6YER100W BET5Q03630 159 aa4.7□□□□□ -1.66
UBC6YER100W MRPL23Q12487 163 aaPredicted RBP4.7□□□□□ -1.66
UBC6YER100W MDM10P18409 493 aa4.69□□□□□ -1.66
UBC6YER100W VAM7P32912 316 aa4.69□□□□□ -1.66
UBC6YER100W SIP2P34164 415 aaKnown RBP4.69□□□□□ -1.66
UBC6YER100W YBR056WP38081 501 aa4.69□□□□□ -1.66
UBC6YER100W YIR014WP40570 242 aa4.69□□□□□ -1.66
UBC6YER100W LAM5P43560 674 aa4.69□□□□□ -1.66
UBC6YER100W PNC1P53184 216 aaKnown RBP4.69□□□□□ -1.66
UBC6YER100W ARK1P53974 638 aa4.69□□□□□ -1.66
UBC6YER100W RPM2Q02773 1202 aa4.69□□□□□ -1.66
UBC6YER100W ARR1Q06596 294 aa4.69□□□□□ -1.66
UBC6YER100W TIM18Q08749 192 aa4.69□□□□□ -1.66
UBC6YER100W YPR022CQ12139 1133 aa4.69□□□□□ -1.66
UBC6YER100W TPT1Q12272 230 aaKnown RBP4.69□□□□□ -1.66
UBC6YER100W TEF1P02994 458 aaKnown RBP4.68□□□□□ -1.66
UBC6YER100W HEM2P05373 342 aa4.68□□□□□ -1.66
UBC6YER100W RPS16AP0CX51 143 aaKnown RBP4.68□□□□□ -1.66
UBC6YER100W RPS16BP0CX52 143 aaKnown RBP4.68□□□□□ -1.66
UBC6YER100W COX13P32799 129 aa4.68□□□□□ -1.66
UBC6YER100W YKL070WP36087 169 aa4.68□□□□□ -1.66
UBC6YER100W GCD10P41814 478 aa4.68□□□□□ -1.66
UBC6YER100W YGR266WP53326 701 aa4.68□□□□□ -1.66
UBC6YER100W YPL068CQ02749 293 aa4.68□□□□□ -1.66
UBC6YER100W SEG1Q04279 960 aa4.68□□□□□ -1.66
UBC6YER100W YMR034CQ05131 434 aaPredicted RBP4.68□□□□□ -1.66
UBC6YER100W YOL075CQ08234 1294 aa4.68□□□□□ -1.66
UBC6YER100W GEP3Q08622 556 aa4.68□□□□□ -1.66
UBC6YER100W AFT2Q08957 416 aa4.68□□□□□ -1.66
UBC6YER100W GLE1Q12315 538 aa4.68□□□□□ -1.66
UBC6YER100W PAB1P04147 577 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66 RIP-Chip
UBC6YER100W ATP1P07251 545 aaKnown RBP4.67□□□□□ -1.66
UBC6YER100W SSA3P09435 649 aaKnown RBP4.67□□□□□ -1.66
UBC6YER100W CLN3P13365 580 aa4.67□□□□□ -1.66
UBC6YER100W MRPL8P22353 238 aa4.67□□□□□ -1.66
UBC6YER100W YPS1P32329 569 aa4.67□□□□□ -1.66
UBC6YER100W LOS1P33418 1100 aaPredicted RBP4.67□□□□□ -1.66
UBC6YER100W RTC2P38279 296 aa4.67□□□□□ -1.66
UBC6YER100W PEX32P38292 413 aa4.67□□□□□ -1.66
UBC6YER100W FLO5P38894 1075 aa4.67□□□□□ -1.66
UBC6YER100W HAT2P39984 401 aa4.67□□□□□ -1.66
UBC6YER100W SIM1P40472 476 aa4.67□□□□□ -1.66
UBC6YER100W PSA1P41940 361 aaKnown RBP4.67□□□□□ -1.66
UBC6YER100W TOS2P50078 622 aa4.67□□□□□ -1.66
UBC6YER100W YGR117CP53270 476 aa4.67□□□□□ -1.66
UBC6YER100W RRN9P53437 365 aa4.67□□□□□ -1.66
UBC6YER100W AIM33Q04516 312 aa4.67□□□□□ -1.66
UBC6YER100W ASA1Q06822 443 aa4.67□□□□□ -1.66
UBC6YER100W RRT8Q08219 342 aa4.67□□□□□ -1.66
UBC6YER100W MUM3Q08750 479 aa4.67□□□□□ -1.66
UBC6YER100W SPO24Q3E752 67 aa4.67□□□□□ -1.66
UBC6YER100W STE2D6VTK4 431 aa4.66□□□□□ -1.66
UBC6YER100W TPK3P05986 398 aa4.66□□□□□ -1.66
UBC6YER100W YLL053CP0CD98 152 aa4.66□□□□□ -1.66
UBC6YER100W RPL42AP0CX27 106 aaKnown RBP4.66□□□□□ -1.66
UBC6YER100W RPL42BP0CX28 106 aaKnown RBP4.66□□□□□ -1.66
UBC6YER100W CKI1P20485 582 aa4.66□□□□□ -1.66
UBC6YER100W YCP4P25349 247 aaKnown RBP4.66□□□□□ -1.66
UBC6YER100W GLC7P32598 312 aaKnown RBP4.66□□□□□ -1.66
UBC6YER100W MST28P39552 234 aa4.66□□□□□ -1.66
UBC6YER100W SHO1P40073 367 aa4.66□□□□□ -1.66
UBC6YER100W DIM1P41819 318 aaKnown RBP4.66□□□□□ -1.66
UBC6YER100W RRT5P43607 289 aa4.66□□□□□ -1.66
UBC6YER100W TOS3P43637 560 aa4.66□□□□□ -1.66
UBC6YER100W PHB2P50085 310 aa4.66□□□□□ -1.66
UBC6YER100W MND1P53102 219 aa4.66□□□□□ -1.66
UBC6YER100W YLR281CQ05863 155 aa4.66□□□□□ -1.66
UBC6YER100W APC2Q12440 853 aa4.66□□□□□ -1.66
UBC6YER100W PAA1Q12447 191 aaKnown RBP4.66□□□□□ -1.66
UBC6YER100W RGS2Q99188 309 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms