RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W YER137CP40083 148 aaKnown RBP5□□□□□ -1.61
UBP9YER098W JLP2P40206 208 aa5□□□□□ -1.61
UBP9YER098W PEP8P40335 379 aa5□□□□□ -1.61
UBP9YER098W YJL070CP40361 888 aa5□□□□□ -1.61
UBP9YER098W GUF1P46943 645 aa5□□□□□ -1.61
UBP9YER098W RPS12P48589 143 aaKnown RBP5□□□□□ -1.61
UBP9YER098W TWF1P53250 332 aa5□□□□□ -1.61
UBP9YER098W CAF40P53829 373 aa5□□□□□ -1.61
UBP9YER098W AIM33Q04516 312 aa5□□□□□ -1.61
UBP9YER098W PDR8Q06149 701 aa5□□□□□ -1.61
UBP9YER098W LUC7Q07508 261 aaPredicted RBP5□□□□□ -1.61
UBP9YER098W YDL242WQ07746 117 aa5□□□□□ -1.61
UBP9YER098W PCL8Q08966 492 aa5□□□□□ -1.61
UBP9YER098W RTC5Q12108 567 aaKnown RBP5□□□□□ -1.61
UBP9YER098W TY3A-GQ12173 290 aa5□□□□□ -1.61
UBP9YER098W TY3A-IQ99219 290 aa5□□□□□ -1.61
UBP9YER098W STE2D6VTK4 431 aa4.99□□□□□ -1.61
UBP9YER098W IPP1P00817 287 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W COX4P04037 155 aa4.99□□□□□ -1.61
UBP9YER098W CDC33P07260 213 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W ABF1P14164 731 aa4.99□□□□□ -1.61
UBP9YER098W KSS1P14681 368 aa4.99□□□□□ -1.61
UBP9YER098W NSP1P14907 823 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W CPR2P23285 205 aa4.99□□□□□ -1.61
UBP9YER098W HXT2P23585 541 aa4.99□□□□□ -1.61
UBP9YER098W POT1P27796 417 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
UBP9YER098W PUB1P32588 453 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
UBP9YER098W WBP1P33767 430 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W TCD2P36101 447 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W STP2P38704 541 aa4.99□□□□□ -1.61
UBP9YER098W KEL1P38853 1164 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W EGD2P38879 174 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W FAA2P39518 744 aa4.99□□□□□ -1.61
UBP9YER098W BUR6P40096 142 aa4.99□□□□□ -1.61
UBP9YER098W SNZ3P43545 298 aa4.99□□□□□ -1.61
UBP9YER098W GET1P53192 235 aa4.99□□□□□ -1.61
UBP9YER098W SNZ2P53824 298 aa4.99□□□□□ -1.61
UBP9YER098W RKI1Q12189 258 aa4.99□□□□□ -1.61
UBP9YER098W RLM1Q12224 676 aa4.99□□□□□ -1.61
UBP9YER098W DCP1Q12517 231 aaPredicted RBP4.99□□□□□ -1.61
UBP9YER098W MYO1P08964 1928 aa4.99□□□□□ -1.61
UBP9YER098W STE3P06783 470 aa4.99□□□□□ -1.61
UBP9YER098W YGL041W-AP0C5N3 154 aa4.99□□□□□ -1.61
UBP9YER098W RPL3P14126 387 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W GLK1P17709 500 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W PMA2P19657 947 aa4.99□□□□□ -1.61
UBP9YER098W CNE1P27825 502 aa4.99□□□□□ -1.61
UBP9YER098W UBC8P28263 218 aa4.99□□□□□ -1.61
UBP9YER098W FTH1P38310 465 aa4.99□□□□□ -1.61
UBP9YER098W LEU5P38702 357 aa4.99□□□□□ -1.61
UBP9YER098W VMA13P41807 478 aaKnown RBP4.99□□□□□ -1.61
UBP9YER098W GLG2P47011 380 aa4.99□□□□□ -1.61
UBP9YER098W COS5P47187 383 aa4.99□□□□□ -1.61
UBP9YER098W FMP48P53233 369 aa4.99□□□□□ -1.61
UBP9YER098W GPI1P53306 609 aa4.99□□□□□ -1.61
UBP9YER098W TRS23Q03784 219 aa4.99□□□□□ -1.61
UBP9YER098W TVP15Q03860 143 aa4.99□□□□□ -1.61
UBP9YER098W COS7Q07788 383 aa4.99□□□□□ -1.61
UBP9YER098W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
UBP9YER098W FMP40Q08968 688 aaPredicted RBP4.99□□□□□ -1.61
UBP9YER098W YOR289WQ12012 251 aaPredicted RBP4.99□□□□□ -1.61
UBP9YER098W ULA1Q12059 462 aa4.99□□□□□ -1.61
UBP9YER098W REX3Q12090 404 aa4.99□□□□□ -1.61
UBP9YER098W MET16P18408 261 aaPredicted RBP4.98□□□□□ -1.61
UBP9YER098W PTC6P25646 442 aa4.98□□□□□ -1.61
UBP9YER098W LIP5P32875 414 aa4.98□□□□□ -1.61
UBP9YER098W PTR2P32901 601 aa4.98□□□□□ -1.61
UBP9YER098W GDH2P33327 1092 aaKnown RBP4.98□□□□□ -1.61
UBP9YER098W SEF1P34228 1148 aa4.98□□□□□ -1.61
UBP9YER098W PHO89P38361 574 aa4.98□□□□□ -1.61
UBP9YER098W KSP1P38691 1029 aaKnown RBP4.98□□□□□ -1.61
UBP9YER098W SEC31P38968 1273 aaKnown RBP4.98□□□□□ -1.61
UBP9YER098W AVT2P39981 480 aa4.98□□□□□ -1.61
UBP9YER098W TIR3P40552 269 aa4.98□□□□□ -1.61
UBP9YER098W UBX6P47049 396 aa4.98□□□□□ -1.61
UBP9YER098W LIF1P53150 421 aa4.98□□□□□ -1.61
UBP9YER098W CGR1P53188 120 aa4.98□□□□□ -1.61
UBP9YER098W YGR111WP53265 400 aa4.98□□□□□ -1.61
UBP9YER098W YNL092WP53934 400 aa4.98□□□□□ -1.61
UBP9YER098W EOS1P53938 366 aa4.98□□□□□ -1.61
UBP9YER098W YMR209CQ03648 457 aa4.98□□□□□ -1.61
UBP9YER098W YDR109CQ04585 715 aa4.98□□□□□ -1.61
UBP9YER098W CSM3Q04659 317 aa4.98□□□□□ -1.61
UBP9YER098W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
UBP9YER098W YPR022CQ12139 1133 aa4.98□□□□□ -1.61
UBP9YER098W NDI1P32340 513 aa4.98□□□□□ -1.61
UBP9YER098W TOD6P34219 525 aa4.98□□□□□ -1.61
UBP9YER098W APL3P38065 1025 aa4.98□□□□□ -1.61
UBP9YER098W RIM2P38127 377 aa4.98□□□□□ -1.61
UBP9YER098W YPT10P38146 199 aa4.98□□□□□ -1.61
UBP9YER098W MSR1P38714 643 aa4.98□□□□□ -1.61
UBP9YER098W YHR218WP38899 603 aa4.98□□□□□ -1.61
UBP9YER098W HXT14P42833 540 aa4.98□□□□□ -1.61
UBP9YER098W CCT7P42943 550 aaKnown RBP4.98□□□□□ -1.61
UBP9YER098W CAK1P43568 368 aaPredicted RBP4.98□□□□□ -1.61
UBP9YER098W MSY1P48527 492 aa4.98□□□□□ -1.61
UBP9YER098W RAD17P48581 401 aa4.98□□□□□ -1.61
UBP9YER098W NAS6P50086 228 aa4.98□□□□□ -1.61
UBP9YER098W BIO3P50277 480 aa4.98□□□□□ -1.61
UBP9YER098W PGA2P53903 129 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms