RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W TSC13Q99190 310 aa7.34□□□□□ -1.23
SHC1YER096W ZWF1P11412 505 aaKnown RBP7.33□□□□□ -1.24
SHC1YER096W CBS2P14905 389 aa7.33□□□□□ -1.24
SHC1YER096W GRR1P24814 1151 aa7.33□□□□□ -1.24
SHC1YER096W CLB3P24870 427 aa7.33□□□□□ -1.24
SHC1YER096W YMC1P32331 307 aa7.33□□□□□ -1.24
SHC1YER096W RPN2P32565 945 aaKnown RBP7.33□□□□□ -1.24
SHC1YER096W YME2P32843 850 aa7.33□□□□□ -1.24
SHC1YER096W MRPL6P32904 214 aa7.33□□□□□ -1.24
SHC1YER096W HCS1P34243 683 aa7.33□□□□□ -1.24
SHC1YER096W THO1P40040 218 aaKnown RBP7.33□□□□□ -1.24
SHC1YER096W UBC9P50623 157 aaPredicted RBP7.33□□□□□ -1.24
SHC1YER096W YGR250CP53316 781 aaKnown RBP7.33□□□□□ -1.24
SHC1YER096W RRN5Q02983 363 aa7.33□□□□□ -1.24
SHC1YER096W SMP3Q04174 516 aa7.33□□□□□ -1.24
SHC1YER096W YMR226CQ05016 267 aaKnown RBP7.33□□□□□ -1.24
SHC1YER096W BNA5Q05979 453 aa7.33□□□□□ -1.24
SHC1YER096W NDL1Q06568 189 aa7.33□□□□□ -1.24
SHC1YER096W RSA1Q08932 381 aa7.33□□□□□ -1.24
SHC1YER096W RPC40P07703 335 aaKnown RBP7.32□□□□□ -1.24
SHC1YER096W RER1P25560 188 aa7.32□□□□□ -1.24
SHC1YER096W IDH1P28834 360 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
SHC1YER096W TDA11P38854 504 aa7.32□□□□□ -1.24
SHC1YER096W YAR028WP39548 234 aa7.32□□□□□ -1.24
SHC1YER096W COG3P40094 801 aa7.32□□□□□ -1.24
SHC1YER096W MON1P53129 644 aa7.32□□□□□ -1.24
SHC1YER096W RSC9Q03124 581 aa7.32□□□□□ -1.24
SHC1YER096W ARO10Q06408 635 aa7.32□□□□□ -1.24
SHC1YER096W OPT2Q06593 877 aa7.32□□□□□ -1.24
SHC1YER096W GLO4Q12320 285 aa7.32□□□□□ -1.24
SHC1YER096W YPL119C-AQ3E751 87 aa7.32□□□□□ -1.24
SHC1YER096W YOR019WQ99248 730 aa7.32□□□□□ -1.24
SHC1YER096W HFA1P32874 2273 aa7.32□□□□□ -1.24
SHC1YER096W ACC1Q00955 2233 aaKnown RBP7.32□□□□□ -1.24
SHC1YER096W GPH1P06738 902 aaKnown RBP7.32□□□□□ -1.24
SHC1YER096W CDC4P07834 779 aa7.32□□□□□ -1.24
SHC1YER096W SSH4P32343 579 aa7.32□□□□□ -1.24
SHC1YER096W SRB5P32585 307 aa7.32□□□□□ -1.24
SHC1YER096W MTG2P38860 518 aa7.32□□□□□ -1.24
SHC1YER096W FMP52P40008 231 aa7.32□□□□□ -1.24
SHC1YER096W GIP2P40036 548 aa7.32□□□□□ -1.24
SHC1YER096W YIL152WP40455 235 aa7.32□□□□□ -1.24
SHC1YER096W FET5P43561 622 aa7.32□□□□□ -1.24
SHC1YER096W ALK1P43633 760 aaKnown RBP7.32□□□□□ -1.24
SHC1YER096W RPS0BP46654 252 aaKnown RBP7.32□□□□□ -1.24
SHC1YER096W PRM8P53174 237 aa7.32□□□□□ -1.24
SHC1YER096W MTQ1P53944 314 aa7.32□□□□□ -1.24
SHC1YER096W RAD30Q04049 632 aa7.32□□□□□ -1.24
SHC1YER096W RSF1Q05043 376 aa7.32□□□□□ -1.24
SHC1YER096W YPR109WQ06104 294 aa7.32□□□□□ -1.24
SHC1YER096W GIC2Q06648 383 aa7.32□□□□□ -1.24
SHC1YER096W YLR030WQ07967 263 aa7.32□□□□□ -1.24
SHC1YER096W LEU9Q12166 604 aaKnown RBP7.32□□□□□ -1.24
SHC1YER096W SEC39Q12745 709 aa7.32□□□□□ -1.24
SHC1YER096W YCK1P23291 538 aa7.31□□□□□ -1.24
SHC1YER096W HOG1P32485 435 aa7.31□□□□□ -1.24
SHC1YER096W OAR1P35731 278 aa7.31□□□□□ -1.24
SHC1YER096W SPO73P40031 143 aa7.31□□□□□ -1.24
SHC1YER096W YJL068CP40363 299 aa7.31□□□□□ -1.24
SHC1YER096W YGR201CP42936 225 aa7.31□□□□□ -1.24
SHC1YER096W HOC1P47124 396 aa7.31□□□□□ -1.24
SHC1YER096W NRM1P53718 249 aa7.31□□□□□ -1.24
SHC1YER096W BNI4P53858 892 aa7.31□□□□□ -1.24
SHC1YER096W TPS1Q00764 495 aaKnown RBP7.31□□□□□ -1.24
SHC1YER096W CTL1Q03220 320 aaKnown RBP7.31□□□□□ -1.24
SHC1YER096W YDL129WQ07555 291 aa7.31□□□□□ -1.24
SHC1YER096W BSC6Q08280 497 aa7.31□□□□□ -1.24
SHC1YER096W MRX4Q12467 430 aa7.31□□□□□ -1.24
SHC1YER096W SEC2P17065 759 aa7.3□□□□□ -1.24
SHC1YER096W RPB5P20434 215 aa7.3□□□□□ -1.24
SHC1YER096W IMG1P25626 169 aa7.3□□□□□ -1.24
SHC1YER096W CDC12P32468 407 aaKnown RBP7.3□□□□□ -1.24
SHC1YER096W SPC42P36094 363 aa7.3□□□□□ -1.24
SHC1YER096W YBR238CP38330 731 aaKnown RBP7.3□□□□□ -1.24
SHC1YER096W PZF1P39933 429 aa7.3□□□□□ -1.24
SHC1YER096W MRPS18P42847 217 aa7.3□□□□□ -1.24
SHC1YER096W FAR7P43592 221 aa7.3□□□□□ -1.24
SHC1YER096W EMC2P47133 292 aaKnown RBP7.3□□□□□ -1.24
SHC1YER096W GPI8P49018 411 aa7.3□□□□□ -1.24
SHC1YER096W TOS2P50078 622 aa7.3□□□□□ -1.24
SHC1YER096W SNF12P53628 566 aa7.3□□□□□ -1.24
SHC1YER096W ERG13P54839 491 aaKnown RBP7.3□□□□□ -1.24
SHC1YER096W RIM13Q03792 727 aa7.3□□□□□ -1.24
SHC1YER096W RRN11Q04712 507 aa7.3□□□□□ -1.24
SHC1YER096W NFI1Q12216 726 aa7.3□□□□□ -1.24
SHC1YER096W SKM1Q12469 655 aa7.3□□□□□ -1.24
SHC1YER096W MOD5P07884 428 aa7.29□□□□□ -1.24
SHC1YER096W PET9P18239 318 aaKnown RBP7.29□□□□□ -1.24
SHC1YER096W FAR1P21268 830 aa7.29□□□□□ -1.24
SHC1YER096W MCK1P21965 375 aaKnown RBP7.29□□□□□ -1.24
SHC1YER096W PET112P33893 541 aa7.29□□□□□ -1.24
SHC1YER096W LOT5P34234 306 aa7.29□□□□□ -1.24
SHC1YER096W RPS27AP35997 82 aaKnown RBP7.29□□□□□ -1.24
SHC1YER096W YRO2P38079 344 aa7.29□□□□□ -1.24
SHC1YER096W RPS27BP38711 82 aa7.29□□□□□ -1.24
SHC1YER096W BIG1P38813 335 aa7.29□□□□□ -1.24
SHC1YER096W TIF11P38912 153 aaKnown RBP7.29□□□□□ -1.24
SHC1YER096W YIL086CP40503 102 aa7.29□□□□□ -1.24
SHC1YER096W HMS2P47175 358 aa7.29□□□□□ -1.24
SHC1YER096W TPC1P53257 314 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms