RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C YIL029CP40538 142 aa2.1□□□□□ -2.07
SMB1YER029C CAK1P43568 368 aaPredicted RBP2.1□□□□□ -2.07
SMB1YER029C ATG18P43601 500 aa2.1□□□□□ -2.07
SMB1YER029C PGU1P47180 361 aa2.1□□□□□ -2.07
SMB1YER029C RIF2Q06208 395 aa2.1□□□□□ -2.07
SMB1YER029C MFG1Q07684 458 aa2.1□□□□□ -2.07
SMB1YER029C NAM2P11325 894 aa2.09□□□□□ -2.07
SMB1YER029C CAP2P13517 287 aa2.09□□□□□ -2.07
SMB1YER029C SRV2P17555 526 aaKnown RBP2.09□□□□□ -2.07
SMB1YER029C RPB5P20434 215 aa2.09□□□□□ -2.07
SMB1YER029C EXG1P23776 448 aaKnown RBP2.09□□□□□ -2.07
SMB1YER029C ASC1P38011 319 aaKnown RBP2.09□□□□□ -2.07
SMB1YER029C YBR056WP38081 501 aa2.09□□□□□ -2.07
SMB1YER029C COX14P39103 70 aa2.09□□□□□ -2.07
SMB1YER029C NOC2P39744 710 aaKnown RBP2.09□□□□□ -2.07
SMB1YER029C EGT2P42835 1041 aa2.09□□□□□ -2.07
SMB1YER029C TOS2P50078 622 aa2.09□□□□□ -2.07
SMB1YER029C MST27P53176 234 aa2.09□□□□□ -2.07
SMB1YER029C STD1Q02794 444 aa2.09□□□□□ -2.07
SMB1YER029C CCE1Q03702 353 aa2.09□□□□□ -2.07
SMB1YER029C CMS1Q07897 291 aaKnown RBP2.09□□□□□ -2.07
SMB1YER029C MTR10Q99189 972 aa2.09□□□□□ -2.07
SMB1YER029C PDX1P16451 410 aa2.08□□□□□ -2.08
SMB1YER029C AAT2P23542 418 aaKnown RBP2.08□□□□□ -2.08
SMB1YER029C CLB1P24868 471 aa2.08□□□□□ -2.08
SMB1YER029C STN1P38960 494 aa2.08□□□□□ -2.08
SMB1YER029C OXA1P39952 402 aa2.08□□□□□ -2.08
SMB1YER029C DFG10P40526 253 aa2.08□□□□□ -2.08
SMB1YER029C LCB3P47013 409 aa2.08□□□□□ -2.08
SMB1YER029C BIR1P47134 954 aa2.08□□□□□ -2.08
SMB1YER029C HOT1Q03213 719 aa2.08□□□□□ -2.08
SMB1YER029C MMT1Q03218 510 aa2.08□□□□□ -2.08
SMB1YER029C TDA1Q03533 586 aa2.08□□□□□ -2.08
SMB1YER029C NDE2Q07500 545 aa2.08□□□□□ -2.08
SMB1YER029C DNL4Q08387 944 aaPredicted RBP2.08□□□□□ -2.08
SMB1YER029C MED2Q12124 431 aa2.08□□□□□ -2.08
SMB1YER029C YBL111CQ3E7Y5 667 aa2.08□□□□□ -2.08
SMB1YER029C JNM1P36224 373 aa2.07□□□□□ -2.08
SMB1YER029C YER186CP40101 306 aa2.07□□□□□ -2.08
SMB1YER029C TOS3P43637 560 aa2.07□□□□□ -2.08
SMB1YER029C ADA2Q02336 434 aa2.07□□□□□ -2.08
SMB1YER029C PRP42Q03776 544 aaKnown RBP2.07□□□□□ -2.08
SMB1YER029C YET2Q04210 160 aa2.07□□□□□ -2.08
SMB1YER029C RTN1Q04947 295 aaKnown RBP2.07□□□□□ -2.08
SMB1YER029C SSC1P0CS90 654 aaKnown RBP2.06□□□□□ -2.08
SMB1YER029C HOM3P10869 527 aa2.06□□□□□ -2.08
SMB1YER029C CPR2P23285 205 aa2.06□□□□□ -2.08
SMB1YER029C TFB1P32776 642 aa2.06□□□□□ -2.08
SMB1YER029C MID2P36027 376 aa2.06□□□□□ -2.08
SMB1YER029C OLA1P38219 394 aaKnown RBP2.06□□□□□ -2.08
SMB1YER029C ZTA1P38230 334 aaKnown RBP2.06□□□□□ -2.08
SMB1YER029C OM14P38325 134 aa2.06□□□□□ -2.08
SMB1YER029C GPI16P38875 610 aa2.06□□□□□ -2.08
SMB1YER029C YFR057WP43625 151 aa2.06□□□□□ -2.08
SMB1YER029C CRH1P53301 507 aa2.06□□□□□ -2.08
SMB1YER029C RMT2Q03305 412 aa2.06□□□□□ -2.08
SMB1YER029C YDR341CQ05506 607 aaKnown RBP2.06□□□□□ -2.08
SMB1YER029C YLR456WQ06199 204 aa2.06□□□□□ -2.08
SMB1YER029C UAF30Q08747 228 aa2.06□□□□□ -2.08
SMB1YER029C RUP1Q12242 671 aa2.06□□□□□ -2.08
SMB1YER029C NCA2Q12374 616 aa2.06□□□□□ -2.08
SMB1YER029C CEX1Q12453 761 aa2.06□□□□□ -2.08
SMB1YER029C PAB1P04147 577 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
SMB1YER029C PRR1P28708 518 aa2.05□□□□□ -2.08
SMB1YER029C CYS4P32582 507 aaKnown RBP2.05□□□□□ -2.08
SMB1YER029C YEF1P32622 495 aa2.05□□□□□ -2.08
SMB1YER029C ATP3P38077 311 aaKnown RBP2.05□□□□□ -2.08
SMB1YER029C SEO1P39709 593 aa2.05□□□□□ -2.08
SMB1YER029C YGR018CP53211 109 aa2.05□□□□□ -2.08
SMB1YER029C RRN9P53437 365 aa2.05□□□□□ -2.08
SMB1YER029C SKI8Q02793 397 aaPredicted RBP2.05□□□□□ -2.08
SMB1YER029C YMR102CQ03177 834 aa2.05□□□□□ -2.08
SMB1YER029C LIP2Q06005 328 aa2.05□□□□□ -2.08
SMB1YER029C SMC5Q08204 1093 aa2.05□□□□□ -2.08
SMB1YER029C EAF3Q12432 401 aa2.05□□□□□ -2.08
SMB1YER029C COX4P04037 155 aa2.04□□□□□ -2.08
SMB1YER029C DST1P07273 309 aa2.04□□□□□ -2.08
SMB1YER029C TOA2P32774 122 aa2.04□□□□□ -2.08
SMB1YER029C INM1P38710 295 aa2.04□□□□□ -2.08
SMB1YER029C POM152P39685 1337 aa2.04□□□□□ -2.08
SMB1YER029C MRPS16Q02608 121 aa2.04□□□□□ -2.08
SMB1YER029C AIM32Q04689 311 aa2.04□□□□□ -2.08
SMB1YER029C VPS54Q12071 889 aa2.04□□□□□ -2.08
SMB1YER029C RNH203Q12338 110 aa2.04□□□□□ -2.08
SMB1YER029C YCR024C-BQ3E7Z8 88 aa2.04□□□□□ -2.08
SMB1YER029C ALG1P16661 449 aa2.03□□□□□ -2.08
SMB1YER029C CDC50P25656 391 aa2.03□□□□□ -2.08
SMB1YER029C SKN1P33336 771 aa2.03□□□□□ -2.08
SMB1YER029C YER079WP40052 210 aaKnown RBP2.03□□□□□ -2.08
SMB1YER029C MMF1P40185 145 aaKnown RBP2.03□□□□□ -2.08
SMB1YER029C ZIM17P42844 174 aa2.03□□□□□ -2.08
SMB1YER029C AIM24P47127 394 aa2.03□□□□□ -2.08
SMB1YER029C ABM1P47146 123 aa2.03□□□□□ -2.08
SMB1YER029C STE24P47154 453 aa2.03□□□□□ -2.08
SMB1YER029C PMT5P52867 743 aa2.03□□□□□ -2.08
SMB1YER029C YGR117CP53270 476 aa2.03□□□□□ -2.08
SMB1YER029C SPC19Q03954 165 aa2.03□□□□□ -2.08
SMB1YER029C NAG1Q8TGN9 163 aa2.03□□□□□ -2.08
SMB1YER029C PSK1P31374 1356 aa2.02□□□□□ -2.09
SMB1YER029C PIS1P06197 220 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms