RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C TEN1Q07921 160 aa2.5□□□□□ -2.01
SSN2YDR443C GAS5Q08193 484 aa2.5□□□□□ -2.01
SSN2YDR443C GPM2Q12008 311 aa2.5□□□□□ -2.01
SSN2YDR443C SWM1Q12379 170 aa2.5□□□□□ -2.01
SSN2YDR443C JIP3O13555 125 aa2.5□□□□□ -2.01
SSN2YDR443C YLR415CO13578 112 aa2.5□□□□□ -2.01
SSN2YDR443C REV1P12689 985 aa2.5□□□□□ -2.01
SSN2YDR443C RHB1P25378 209 aa2.5□□□□□ -2.01
SSN2YDR443C NRP1P32770 719 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SSN2YDR443C NTR2P36118 322 aaPredicted RBP2.5□□□□□ -2.01
SSN2YDR443C RPF2P36160 344 aaKnown RBP2.5□□□□□ -2.01
SSN2YDR443C DSN1P40568 576 aa2.5□□□□□ -2.01
SSN2YDR443C SLI1P53304 468 aa2.5□□□□□ -2.01
SSN2YDR443C SSU72P53538 206 aaPredicted RBP2.5□□□□□ -2.01
SSN2YDR443C MTQ1P53944 314 aa2.5□□□□□ -2.01
SSN2YDR443C GFD1Q04839 188 aaKnown RBP2.5□□□□□ -2.01
SSN2YDR443C YML053CQ04978 212 aa2.5□□□□□ -2.01
SSN2YDR443C CDA2Q06703 312 aa2.5□□□□□ -2.01
SSN2YDR443C TPO1Q07824 586 aa2.5□□□□□ -2.01
SSN2YDR443C INP53Q12271 1107 aa2.5□□□□□ -2.01
SSN2YDR443C AI5_BETAQ9ZZX0 354 aa2.5□□□□□ -2.01
SSN2YDR443C SGV1P23293 657 aaKnown RBP2.5□□□□□ -2.01
SSN2YDR443C YPK3P38070 525 aa2.5□□□□□ -2.01
SSN2YDR443C YNL194CP40169 301 aa2.5□□□□□ -2.01
SSN2YDR443C ICE2P40499 491 aa2.5□□□□□ -2.01
SSN2YDR443C OPT1P40897 799 aa2.5□□□□□ -2.01
SSN2YDR443C ERG10P41338 398 aaKnown RBP2.5□□□□□ -2.01
SSN2YDR443C GAB1P41733 394 aa2.5□□□□□ -2.01
SSN2YDR443C LOH1P47055 219 aa2.5□□□□□ -2.01
SSN2YDR443C SIZ1Q04195 904 aa2.5□□□□□ -2.01
SSN2YDR443C YDR222WQ04925 415 aa2.5□□□□□ -2.01
SSN2YDR443C COQ11Q05892 277 aa2.5□□□□□ -2.01
SSN2YDR443C YDL057WQ07379 328 aa2.5□□□□□ -2.01
SSN2YDR443C NSE1Q07913 336 aa2.5□□□□□ -2.01
SSN2YDR443C MED2Q12124 431 aa2.5□□□□□ -2.01
SSN2YDR443C THP2O13539 261 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C SPS4P09937 338 aa2.49□□□□□ -2.01
SSN2YDR443C CHS2P14180 963 aa2.49□□□□□ -2.01
SSN2YDR443C PDE1P22434 369 aa2.49□□□□□ -2.01
SSN2YDR443C YSP3P25036 478 aa2.49□□□□□ -2.01
SSN2YDR443C ZIP1P31111 875 aa2.49□□□□□ -2.01
SSN2YDR443C APD1P38281 316 aa2.49□□□□□ -2.01
SSN2YDR443C GTF1P53260 183 aaPredicted RBP2.49□□□□□ -2.01
SSN2YDR443C YGR168CP53293 376 aa2.49□□□□□ -2.01
SSN2YDR443C TEX1P53851 422 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C ADE16P54113 591 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C SMP3Q04174 516 aa2.49□□□□□ -2.01
SSN2YDR443C AIR2Q12476 344 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C OPI3P05375 206 aa2.49□□□□□ -2.01
SSN2YDR443C SAM35P14693 329 aa2.49□□□□□ -2.01
SSN2YDR443C STE18P18852 110 aa2.49□□□□□ -2.01
SSN2YDR443C SNF6P18888 332 aa2.49□□□□□ -2.01
SSN2YDR443C ERG9P29704 444 aa2.49□□□□□ -2.01
SSN2YDR443C ATP7P30902 174 aa2.49□□□□□ -2.01
SSN2YDR443C UBC6P33296 250 aaPredicted RBP2.49□□□□□ -2.01
SSN2YDR443C POP7P38291 140 aa2.49□□□□□ -2.01
SSN2YDR443C PCF11P39081 626 aaPredicted RBP2.49□□□□□ -2.01
SSN2YDR443C SYO1Q07395 620 aa2.49□□□□□ -2.01
SSN2YDR443C YOL075CQ08234 1294 aa2.49□□□□□ -2.01
SSN2YDR443C YPQ1Q12010 308 aa2.49□□□□□ -2.01
SSN2YDR443C SRO7Q12038 1033 aa2.49□□□□□ -2.01
SSN2YDR443C SLM3Q12093 417 aa2.49□□□□□ -2.01
SSN2YDR443C RIB2Q12362 591 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C ADH2P00331 348 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C COR1P07256 457 aa2.49□□□□□ -2.01
SSN2YDR443C SPE1P08432 466 aa2.49□□□□□ -2.01
SSN2YDR443C YPK1P12688 680 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C MET16P18408 261 aaPredicted RBP2.49□□□□□ -2.01
SSN2YDR443C GIT1P25346 518 aa2.49□□□□□ -2.01
SSN2YDR443C PUP3P25451 205 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C MET22P32179 357 aa2.49□□□□□ -2.01
SSN2YDR443C COS9P36034 407 aa2.49□□□□□ -2.01
SSN2YDR443C DOA1P36037 715 aa2.49□□□□□ -2.01
SSN2YDR443C YNG2P38806 282 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C ANS1P38832 159 aa2.49□□□□□ -2.01
SSN2YDR443C ELO1P39540 310 aa2.49□□□□□ -2.01
SSN2YDR443C YGL108CP53139 140 aa2.49□□□□□ -2.01
SSN2YDR443C RRN9P53437 365 aa2.49□□□□□ -2.01
SSN2YDR443C MRPL50P53724 139 aa2.49□□□□□ -2.01
SSN2YDR443C ZRG17P53735 605 aa2.49□□□□□ -2.01
SSN2YDR443C TRM112P53738 135 aaPredicted RBP2.49□□□□□ -2.01
SSN2YDR443C AIM33Q04516 312 aa2.49□□□□□ -2.01
SSN2YDR443C ATG17Q06410 417 aa2.49□□□□□ -2.01
SSN2YDR443C SDO1Q07953 250 aaKnown RBP2.49□□□□□ -2.01
SSN2YDR443C TRM11Q12463 433 aa2.49□□□□□ -2.01
SSN2YDR443C SEN2P16658 377 aa2.48□□□□□ -2.01
SSN2YDR443C VPS1P21576 704 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C ADE1P27616 306 aa2.48□□□□□ -2.01
SSN2YDR443C AIM29P36154 155 aa2.48□□□□□ -2.01
SSN2YDR443C YBR259WP38338 688 aa2.48□□□□□ -2.01
SSN2YDR443C STP2P38704 541 aa2.48□□□□□ -2.01
SSN2YDR443C YIL001WP40560 513 aa2.48□□□□□ -2.01
SSN2YDR443C NPA3P47122 385 aa2.48□□□□□ -2.01
SSN2YDR443C FHN1P53279 174 aa2.48□□□□□ -2.01
SSN2YDR443C NOP19P53317 196 aaPredicted RBP2.48□□□□□ -2.01
SSN2YDR443C YMR209CQ03648 457 aa2.48□□□□□ -2.01
SSN2YDR443C CYK3Q07533 885 aa2.48□□□□□ -2.01
SSN2YDR443C PDC5P16467 563 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C GAS1P22146 559 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C RPL24BP24000 155 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms