RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W HPR1P17629 752 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W HRR25P29295 494 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W GDA1P32621 518 aa1.28□□□□□ -2.2
MSN5YDR335W COX13P32799 129 aa1.28□□□□□ -2.2
MSN5YDR335W RPC34P32910 317 aa1.28□□□□□ -2.2
MSN5YDR335W AST1P35183 429 aa1.28□□□□□ -2.2
MSN5YDR335W SOR1P35497 357 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W SNU114P36048 1008 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W APL3P38065 1025 aa1.28□□□□□ -2.2
MSN5YDR335W RRN10P38204 145 aa1.28□□□□□ -2.2
MSN5YDR335W QDR3P38227 689 aa1.28□□□□□ -2.2
MSN5YDR335W GPI16P38875 610 aa1.28□□□□□ -2.2
MSN5YDR335W HXT9P40885 567 aa1.28□□□□□ -2.2
MSN5YDR335W PMT6P42934 759 aa1.28□□□□□ -2.2
MSN5YDR335W TIM21P53220 239 aa1.28□□□□□ -2.2
MSN5YDR335W COP1P53622 1201 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W HXT11P54862 567 aa1.28□□□□□ -2.2
MSN5YDR335W KIN4Q01919 800 aa1.28□□□□□ -2.2
MSN5YDR335W YDR541CQ03049 344 aa1.28□□□□□ -2.2
MSN5YDR335W URH1Q04179 340 aa1.28□□□□□ -2.2
MSN5YDR335W RRB1Q04225 511 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W MGR3Q04472 501 aa1.28□□□□□ -2.2
MSN5YDR335W SOR2Q07786 357 aa1.28□□□□□ -2.2
MSN5YDR335W PER33Q12144 273 aa1.28□□□□□ -2.2
MSN5YDR335W SUT2Q12286 268 aa1.28□□□□□ -2.2
MSN5YDR335W CMC2Q3E7A4 109 aa1.28□□□□□ -2.2
MSN5YDR335W SEC3P33332 1336 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W YER145C-AA0A023PYF4 145 aa1.28□□□□□ -2.2
MSN5YDR335W PAB1P04147 577 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
MSN5YDR335W CAF20P12962 161 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W YAK1P14680 807 aa1.28□□□□□ -2.2
MSN5YDR335W YCP4P25349 247 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W ERG9P29704 444 aa1.28□□□□□ -2.2
MSN5YDR335W NDI1P32340 513 aa1.28□□□□□ -2.2
MSN5YDR335W RPC25P35718 212 aa1.28□□□□□ -2.2
MSN5YDR335W YPT52P36018 234 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W MIC60P36112 540 aa1.28□□□□□ -2.2
MSN5YDR335W DRE2P36152 348 aa1.28□□□□□ -2.2
MSN5YDR335W BIG1P38813 335 aa1.28□□□□□ -2.2
MSN5YDR335W YHR177WP38867 453 aa1.28□□□□□ -2.2
MSN5YDR335W RIX1P38883 763 aaPredicted RBP1.28□□□□□ -2.2
MSN5YDR335W ELO1P39540 310 aa1.28□□□□□ -2.2
MSN5YDR335W PRM9P39551 298 aa1.28□□□□□ -2.2
MSN5YDR335W YER130CP39959 443 aa1.28□□□□□ -2.2
MSN5YDR335W PCL6P40038 420 aa1.28□□□□□ -2.2
MSN5YDR335W YER085CP40058 173 aa1.28□□□□□ -2.2
MSN5YDR335W MMF1P40185 145 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W YIR042CP40586 236 aa1.28□□□□□ -2.2
MSN5YDR335W OPT1P40897 799 aa1.28□□□□□ -2.2
MSN5YDR335W FAR3P46671 204 aa1.28□□□□□ -2.2
MSN5YDR335W AIM24P47127 394 aa1.28□□□□□ -2.2
MSN5YDR335W SSN8P47821 323 aa1.28□□□□□ -2.2
MSN5YDR335W YGL159WP53110 370 aa1.28□□□□□ -2.2
MSN5YDR335W YNL260CP53846 198 aa1.28□□□□□ -2.2
MSN5YDR335W DSL1P53847 754 aa1.28□□□□□ -2.2
MSN5YDR335W EFM6P53970 246 aa1.28□□□□□ -2.2
MSN5YDR335W MPS1P54199 764 aa1.28□□□□□ -2.2
MSN5YDR335W YDR132CQ03900 495 aa1.28□□□□□ -2.2
MSN5YDR335W YDR387CQ04162 555 aa1.28□□□□□ -2.2
MSN5YDR335W PLM2Q04383 521 aa1.28□□□□□ -2.2
MSN5YDR335W THI7Q05998 598 aa1.28□□□□□ -2.2
MSN5YDR335W RRG8Q06109 277 aa1.28□□□□□ -2.2
MSN5YDR335W YLR455WQ06188 304 aa1.28□□□□□ -2.2
MSN5YDR335W SYO1Q07395 620 aa1.28□□□□□ -2.2
MSN5YDR335W DNL4Q08387 944 aaPredicted RBP1.28□□□□□ -2.2
MSN5YDR335W SLF1Q12034 447 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W MED2Q12124 431 aa1.28□□□□□ -2.2
MSN5YDR335W YLL056CQ12177 298 aa1.28□□□□□ -2.2
MSN5YDR335W DCP1Q12517 231 aaPredicted RBP1.28□□□□□ -2.2
MSN5YDR335W SEY1Q99287 776 aa1.28□□□□□ -2.2
MSN5YDR335W FBA1P14540 359 aaKnown RBP1.28□□□□□ -2.21
MSN5YDR335W SPO12P17123 173 aa1.28□□□□□ -2.21
MSN5YDR335W YPK2P18961 677 aa1.28□□□□□ -2.21
MSN5YDR335W MEK1P24719 497 aaPredicted RBP1.28□□□□□ -2.21
MSN5YDR335W ATP3P38077 311 aaKnown RBP1.28□□□□□ -2.21
MSN5YDR335W STN1P38960 494 aa1.28□□□□□ -2.21
MSN5YDR335W MBB1P39534 108 aa1.28□□□□□ -2.21
MSN5YDR335W YMR147WP40218 223 aaKnown RBP1.28□□□□□ -2.21
MSN5YDR335W YIA6P40556 373 aa1.28□□□□□ -2.21
MSN5YDR335W HMS2P47175 358 aa1.28□□□□□ -2.21
MSN5YDR335W VEL1P53058 206 aa1.28□□□□□ -2.21
MSN5YDR335W PCP1P53259 346 aa1.28□□□□□ -2.21
MSN5YDR335W YGR151CP53287 111 aa1.28□□□□□ -2.21
MSN5YDR335W BUD32P53323 261 aa1.28□□□□□ -2.21
MSN5YDR335W SPP2Q02521 185 aa1.28□□□□□ -2.21
MSN5YDR335W LGE1Q02796 332 aaKnown RBP1.28□□□□□ -2.21
MSN5YDR335W MSC3Q05812 728 aa1.28□□□□□ -2.21
MSN5YDR335W IPK1Q06667 281 aa1.28□□□□□ -2.21
MSN5YDR335W TGS1Q12052 315 aa1.28□□□□□ -2.21
MSN5YDR335W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.28□□□□□ -2.21not detected
MSN5YDR335W FSH3Q99369 266 aa1.28□□□□□ -2.21
MSN5YDR335W QCR6P00127 147 aa1.27□□□□□ -2.21
MSN5YDR335W RPL28P02406 149 aaKnown RBP1.27□□□□□ -2.21
MSN5YDR335W PEP5P12868 1029 aa1.27□□□□□ -2.21
MSN5YDR335W PMA2P19657 947 aa1.27□□□□□ -2.21
MSN5YDR335W YCL068CP25593 260 aa1.27□□□□□ -2.21
MSN5YDR335W IDH1P28834 360 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
MSN5YDR335W DOA1P36037 715 aa1.27□□□□□ -2.21
MSN5YDR335W SWD2P36104 329 aaPredicted RBP1.27□□□□□ -2.21
MSN5YDR335W TRM5P38793 499 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms