RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C GPI18P38211 433 aa2.25□□□□□ -2.05
SNU56YDR240C EGT2P42835 1041 aa2.25□□□□□ -2.05
SNU56YDR240C YPS5P53057 165 aa2.25□□□□□ -2.05
SNU56YDR240C CRH1P53301 507 aa2.25□□□□□ -2.05
SNU56YDR240C MMT1Q03218 510 aa2.25□□□□□ -2.05
SNU56YDR240C PRM6Q04705 352 aa2.25□□□□□ -2.05
SNU56YDR240C IMA3P0CW40 589 aa2.24□□□□□ -2.05
SNU56YDR240C IMA4P0CW41 589 aa2.24□□□□□ -2.05
SNU56YDR240C BRF1P29056 596 aa2.24□□□□□ -2.05
SNU56YDR240C DPH5P32469 300 aaPredicted RBP2.24□□□□□ -2.05
SNU56YDR240C YHK8P38776 514 aa2.24□□□□□ -2.05
SNU56YDR240C YPS6P40583 537 aa2.24□□□□□ -2.05
SNU56YDR240C LCB3P47013 409 aa2.24□□□□□ -2.05
SNU56YDR240C FLC3P53121 802 aa2.24□□□□□ -2.05
SNU56YDR240C TPS1Q00764 495 aaKnown RBP2.24□□□□□ -2.05
SNU56YDR240C STD1Q02794 444 aa2.24□□□□□ -2.05
SNU56YDR240C YMR130WQ04223 302 aa2.24□□□□□ -2.05
SNU56YDR240C DCS1Q06151 350 aa2.24□□□□□ -2.05
SNU56YDR240C YPR091CQ06833 770 aa2.24□□□□□ -2.05
SNU56YDR240C IMA2Q08295 589 aa2.24□□□□□ -2.05
SNU56YDR240C RUP1Q12242 671 aa2.24□□□□□ -2.05
SNU56YDR240C NAG1Q8TGN9 163 aa2.24□□□□□ -2.05
SNU56YDR240C YRF1-4O13559 1382 aa2.24□□□□□ -2.05
SNU56YDR240C PIS1P06197 220 aaKnown RBP2.23□□□□□ -2.05
SNU56YDR240C URA4P20051 364 aa2.23□□□□□ -2.05
SNU56YDR240C EXG1P23776 448 aaKnown RBP2.23□□□□□ -2.05
SNU56YDR240C NDE1P40215 560 aa2.23□□□□□ -2.05
SNU56YDR240C TOS3P43637 560 aa2.23□□□□□ -2.05
SNU56YDR240C SKI8Q02793 397 aaPredicted RBP2.23□□□□□ -2.05
SNU56YDR240C TDA1Q03533 586 aa2.23□□□□□ -2.05
SNU56YDR240C RPN9Q04062 393 aaKnown RBP2.23□□□□□ -2.05
SNU56YDR240C SNT309Q06091 175 aaPredicted RBP2.23□□□□□ -2.05
SNU56YDR240C SCM3Q12334 223 aa2.23□□□□□ -2.05
SNU56YDR240C NCA2Q12374 616 aa2.23□□□□□ -2.05
SNU56YDR240C CAP2P13517 287 aa2.22□□□□□ -2.05
SNU56YDR240C DEP1P31385 405 aa2.22□□□□□ -2.05
SNU56YDR240C TOM22P49334 152 aa2.22□□□□□ -2.05
SNU56YDR240C KTR6P54070 446 aa2.22□□□□□ -2.05
SNU56YDR240C ACL4Q03771 387 aa2.22□□□□□ -2.05
SNU56YDR240C YLR287CQ05881 355 aa2.22□□□□□ -2.05
SNU56YDR240C FOL3Q12676 427 aaPredicted RBP2.22□□□□□ -2.05
SNU56YDR240C ISN1Q99312 450 aa2.22□□□□□ -2.05
SNU56YDR240C TY1B-AO13527 1196 aaKnown RBP2.21□□□□□ -2.06
SNU56YDR240C ADH1P00330 348 aaKnown RBP2.21□□□□□ -2.06
SNU56YDR240C CDC31P06704 161 aaKnown RBP2.21□□□□□ -2.06
SNU56YDR240C ZRC1P20107 442 aa2.21□□□□□ -2.06
SNU56YDR240C YCR051WP25631 222 aa2.21□□□□□ -2.06
SNU56YDR240C COX13P32799 129 aa2.21□□□□□ -2.06
SNU56YDR240C YNL208WP40159 199 aaKnown RBP2.21□□□□□ -2.06
SNU56YDR240C GAT2P40209 560 aa2.21□□□□□ -2.06
SNU56YDR240C YGR018CP53211 109 aa2.21□□□□□ -2.06
SNU56YDR240C RPT4P53549 437 aaKnown RBP2.21□□□□□ -2.06
SNU56YDR240C YDL114WQ07530 308 aa2.21□□□□□ -2.06
SNU56YDR240C MFG1Q07684 458 aa2.21□□□□□ -2.06
SNU56YDR240C YEF1P32622 495 aa2.2□□□□□ -2.06
SNU56YDR240C BMT2P38278 337 aa2.2□□□□□ -2.06
SNU56YDR240C AIP1P46680 615 aaKnown RBP2.2□□□□□ -2.06
SNU56YDR240C PGU1P47180 361 aa2.2□□□□□ -2.06
SNU56YDR240C YGL262WP53054 175 aa2.2□□□□□ -2.06
SNU56YDR240C YGR250CP53316 781 aaKnown RBP2.2□□□□□ -2.06
SNU56YDR240C OCA2P53949 197 aa2.2□□□□□ -2.06
SNU56YDR240C HOT1Q03213 719 aa2.2□□□□□ -2.06
SNU56YDR240C ROY1Q04847 553 aa2.2□□□□□ -2.06
SNU56YDR240C HTZ1Q12692 134 aaKnown RBP2.2□□□□□ -2.06
SNU56YDR240C MTR10Q99189 972 aa2.2□□□□□ -2.06
SNU56YDR240C BI3Q9ZZW7 517 aa2.2□□□□□ -2.06
SNU56YDR240C RAD5P32849 1169 aaPredicted RBP2.2□□□□□ -2.06
SNU56YDR240C MRPL27P36526 146 aaPredicted RBP2.2□□□□□ -2.06
SNU56YDR240C DTR1P38125 572 aa2.2□□□□□ -2.06
SNU56YDR240C OLA1P38219 394 aaKnown RBP2.2□□□□□ -2.06
SNU56YDR240C GPD2P41911 440 aaKnown RBP2.2□□□□□ -2.06
SNU56YDR240C YIP5P53108 310 aa2.2□□□□□ -2.06
SNU56YDR240C RRP46P53256 223 aaPredicted RBP2.2□□□□□ -2.06
SNU56YDR240C COS1P53822 381 aa2.2□□□□□ -2.06
SNU56YDR240C PRP42Q03776 544 aaKnown RBP2.2□□□□□ -2.06
SNU56YDR240C MCH1Q07376 486 aa2.2□□□□□ -2.06
SNU56YDR240C POM152P39685 1337 aa2.19□□□□□ -2.06
SNU56YDR240C COX3P00420 269 aa2.19□□□□□ -2.06
SNU56YDR240C PAB1P04147 577 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SNU56YDR240C LSM5P40089 93 aaKnown RBP2.19□□□□□ -2.06
SNU56YDR240C YFL012WP43580 148 aa2.19□□□□□ -2.06
SNU56YDR240C IGD1P43598 195 aa2.19□□□□□ -2.06
SNU56YDR240C SRB7P47822 140 aa2.19□□□□□ -2.06
SNU56YDR240C VHT1P53241 593 aa2.19□□□□□ -2.06
SNU56YDR240C YPL107WQ02873 248 aa2.19□□□□□ -2.06
SNU56YDR240C RAX2Q12465 1220 aa2.19□□□□□ -2.06
SNU56YDR240C AFI1Q99222 893 aa2.19□□□□□ -2.06
SNU56YDR240C ATP1P07251 545 aaKnown RBP2.18□□□□□ -2.06
SNU56YDR240C FUN26P31381 517 aa2.18□□□□□ -2.06
SNU56YDR240C RPN12P32496 274 aa2.18□□□□□ -2.06
SNU56YDR240C ZUO1P32527 433 aaKnown RBP2.18□□□□□ -2.06
SNU56YDR240C SEC9P40357 651 aa2.18□□□□□ -2.06
SNU56YDR240C CAK1P43568 368 aaPredicted RBP2.18□□□□□ -2.06
SNU56YDR240C YLR345WQ06137 509 aa2.18□□□□□ -2.06
SNU56YDR240C MMR1Q06324 491 aa2.18□□□□□ -2.06
SNU56YDR240C PIN3Q06449 215 aa2.18□□□□□ -2.06
SNU56YDR240C BUD21Q08492 214 aaPredicted RBP2.18□□□□□ -2.06
SNU56YDR240C PRM7Q12459 698 aa2.18□□□□□ -2.06
SNU56YDR240C YCR024C-BQ3E7Z8 88 aa2.18□□□□□ -2.06
SNU56YDR240C STE7P06784 515 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms