RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	ATG18	P43601	500 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	RPS10B	P46784	105 aa	Known RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	RAD17	P48581	401 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	MPC1	P53157	130 aa	Known RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	LSM7	P53905	115 aa	Known RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	KIN4	Q01919	800 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	ARA2	Q04212	335 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	RPS10A	Q08745	105 aa	Predicted RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	GPB1	Q08886	897 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	FRE3	Q08905	711 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	YPR027C	Q12079	277 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	HEM2	P05373	342 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	LAT1	P12695	482 aa	Known RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	FUS3	P16892	353 aa	Known RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	PPH22	P23595	377 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	PHO91	P27514	894 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	PTR2	P32901	601 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	SPT10	P35208	640 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	VRP1	P37370	817 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	LDH1	P38139	375 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	SIF2	P38262	535 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	RRF1	P38771	230 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	RFC2	P40348	353 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	SSU1	P41930	458 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	LSM8	P47093	109 aa	Known RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	GTF1	P53260	183 aa	Predicted RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	OKP1	P53298	406 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	IBD2	P53892	351 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	KTR6	P54070	446 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	ECM11	Q04110	302 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	RGT2	Q12300	763 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	PNS1	Q12412	539 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	AIR2	Q12476	344 aa	Known RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	COX5A	P00424	153 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	CDC4	P07834	779 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	MSF1	P08425	469 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	YCK1	P23291	538 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	MNE1	P24720	663 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	RNA14	P25298	677 aa	Known RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	COX13	P32799	129 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	BEM3	P32873	1128 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	SDS22	P36047	338 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	DHH1	P39517	506 aa	Known RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	MPM1	P40364	252 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	MND2	P40577	368 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	CUL3	P53202	744 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	CAF120	P53836	1060 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
UPC2	YDR213W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
UPC2	YDR213W	ACS1	Q01574	713 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	TIM44	Q01852	431 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	ARL3	Q02804	198 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	MET31	Q03081	177 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	RVB1	Q03940	463 aa	Known RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	HEL2	Q05580	639 aa	Known RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	YLR225C	Q05948	407 aa	Known RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	CYK3	Q07533	885 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	PLB3	Q08108	686 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	THP1	Q08231	455 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	FRE5	Q08908	694 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	MRH1	Q12117	320 aa	Predicted RBP	4.11	□□□□□ -1.75
UPC2	YDR213W	SIA1	Q12212	622 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	HOS1	Q12214	470 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	PCD1	Q12524	340 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	MTR10	Q99189	972 aa		4.11	□□□□□ -1.75
UPC2	YDR213W	RPS18A	P0CX55	146 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	RPS18B	P0CX56	146 aa	Predicted RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	RPL3	P14126	387 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	CKS1	P20486	150 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	SED4	P25365	1065 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	TAH1	P25638	111 aa	Predicted RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	ACB1	P31787	87 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	SFP1	P32432	683 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	TUL1	P36096	758 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	YJL218W	P40892	196 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	YJL171C	P46992	396 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	JHD2	P47156	728 aa	Predicted RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	MNN10	P50108	393 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	POP6	P53218	158 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	PRM15	Q03262	622 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	CWC21	Q03375	135 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	TRM82	Q03774	444 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	GAD1	Q04792	585 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	OPT2	Q06593	877 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	YOR283W	Q12040	230 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	BMT6	Q12291	365 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	EAF3	Q12432	401 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	FUM1	P08417	488 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	RPS1B	P23248	255 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	RPS1A	P33442	255 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	FLO10	P36170	1169 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	FMP23	P38231	175 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	IMD2	P38697	523 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	DED81	P38707	554 aa	Known RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	GEP4	P38812	185 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	PTI1	P39927	425 aa	Predicted RBP	4.1	□□□□□ -1.75
UPC2	YDR213W	RTS2	P40962	232 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	AAD14	P42884	376 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	RET2	P43621	546 aa		4.1	□□□□□ -1.75
UPC2	YDR213W	LSM1	P47017	172 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms