RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C MSI1P13712 422 aa3.35□□□□□ -1.87
YDR034C-CYDR034C-C HSP26P15992 214 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
YDR034C-CYDR034C-C AAT2P23542 418 aaKnown RBP3.35□□□□□ -1.87
YDR034C-CYDR034C-C ERV1P27882 189 aa3.35□□□□□ -1.87
YDR034C-CYDR034C-C YER079WP40052 210 aaKnown RBP3.35□□□□□ -1.87
YDR034C-CYDR034C-C GAT2P40209 560 aa3.35□□□□□ -1.87
YDR034C-CYDR034C-C TSA2Q04120 196 aa3.35□□□□□ -1.87
YDR034C-CYDR034C-C LOT6Q07923 191 aa3.35□□□□□ -1.87
YDR034C-CYDR034C-C SMF3Q12078 473 aaPredicted RBP3.35□□□□□ -1.87
YDR034C-CYDR034C-C DST1P07273 309 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C RPB5P20434 215 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C PHA2P32452 334 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C NIP1P32497 812 aaKnown RBP3.34□□□□□ -1.87
YDR034C-CYDR034C-C HEL1P36113 551 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C ASC1P38011 319 aaKnown RBP3.34□□□□□ -1.87
YDR034C-CYDR034C-C MRP21P38175 177 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C OLA1P38219 394 aaKnown RBP3.34□□□□□ -1.87
YDR034C-CYDR034C-C VHS2P40463 436 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C ZIM17P42844 174 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C TOS3P43637 560 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C LCB3P47013 409 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C AIM24P47127 394 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C RRP46P53256 223 aaPredicted RBP3.34□□□□□ -1.87
YDR034C-CYDR034C-C SMC5Q08204 1093 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C RUP1Q12242 671 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C EAF3Q12432 401 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C AHC1Q12433 566 aa3.34□□□□□ -1.87
YDR034C-CYDR034C-C SPT10P35208 640 aa3.33□□□□□ -1.88
YDR034C-CYDR034C-C MID2P36027 376 aa3.33□□□□□ -1.88
YDR034C-CYDR034C-C YPS6P40583 537 aa3.33□□□□□ -1.88
YDR034C-CYDR034C-C YMR102CQ03177 834 aa3.33□□□□□ -1.88
YDR034C-CYDR034C-C YDR131CQ03899 556 aa3.33□□□□□ -1.88
YDR034C-CYDR034C-C RPN9Q04062 393 aaKnown RBP3.33□□□□□ -1.88
YDR034C-CYDR034C-C SNT309Q06091 175 aaPredicted RBP3.33□□□□□ -1.88
YDR034C-CYDR034C-C CMS1Q07897 291 aaKnown RBP3.33□□□□□ -1.88
YDR034C-CYDR034C-C COX3P00420 269 aa3.32□□□□□ -1.88
YDR034C-CYDR034C-C CDC21P06785 304 aa3.32□□□□□ -1.88
YDR034C-CYDR034C-C ATP1P07251 545 aaKnown RBP3.32□□□□□ -1.88
YDR034C-CYDR034C-C CPR2P23285 205 aa3.32□□□□□ -1.88
YDR034C-CYDR034C-C EXG1P23776 448 aaKnown RBP3.32□□□□□ -1.88
YDR034C-CYDR034C-C COX13P32799 129 aa3.32□□□□□ -1.88
YDR034C-CYDR034C-C OXA1P39952 402 aa3.32□□□□□ -1.88
YDR034C-CYDR034C-C MMF1P40185 145 aaKnown RBP3.32□□□□□ -1.88
YDR034C-CYDR034C-C TOM22P49334 152 aa3.32□□□□□ -1.88
YDR034C-CYDR034C-C PIB2P53191 635 aa3.32□□□□□ -1.88
YDR034C-CYDR034C-C PRP42Q03776 544 aaKnown RBP3.32□□□□□ -1.88
YDR034C-CYDR034C-C PIS1P06197 220 aaKnown RBP3.31□□□□□ -1.88
YDR034C-CYDR034C-C CAP2P13517 287 aa3.31□□□□□ -1.88
YDR034C-CYDR034C-C RIM1P32445 135 aaKnown RBP3.31□□□□□ -1.88
YDR034C-CYDR034C-C IES6P32617 166 aa3.31□□□□□ -1.88
YDR034C-CYDR034C-C ZTA1P38230 334 aaKnown RBP3.31□□□□□ -1.88
YDR034C-CYDR034C-C MST27P53176 234 aa3.31□□□□□ -1.88
YDR034C-CYDR034C-C HTZ1Q12692 134 aaKnown RBP3.31□□□□□ -1.88
YDR034C-CYDR034C-C HSP104P31539 908 aaKnown RBP3.3□□□□□ -1.88
YDR034C-CYDR034C-C DPH5P32469 300 aaPredicted RBP3.3□□□□□ -1.88
YDR034C-CYDR034C-C SER3P40054 469 aa3.3□□□□□ -1.88
YDR034C-CYDR034C-C SIM1P40472 476 aa3.3□□□□□ -1.88
YDR034C-CYDR034C-C TCB2P48231 1178 aa3.3□□□□□ -1.88
YDR034C-CYDR034C-C AIM32Q04689 311 aa3.3□□□□□ -1.88
YDR034C-CYDR034C-C PRM6Q04705 352 aa3.3□□□□□ -1.88
YDR034C-CYDR034C-C ARO3P14843 370 aaKnown RBP3.29□□□□□ -1.88
YDR034C-CYDR034C-C MDH1P17505 334 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
YDR034C-CYDR034C-C EGT2P42835 1041 aa3.29□□□□□ -1.88
YDR034C-CYDR034C-C YGR111WP53265 400 aa3.29□□□□□ -1.88
YDR034C-CYDR034C-C CRH1P53301 507 aa3.29□□□□□ -1.88
YDR034C-CYDR034C-C POM152P39685 1337 aa3.29□□□□□ -1.88
YDR034C-CYDR034C-C PSK1P31374 1356 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C PDE2P06776 526 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C YEF1P32622 495 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C SKN1P33336 771 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C INM1P38710 295 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C FAD1P38913 306 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C STN1P38960 494 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C YNL208WP40159 199 aaKnown RBP3.28□□□□□ -1.88
YDR034C-CYDR034C-C CLD1P53264 445 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C MKC7P53379 596 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C SPR6Q01684 191 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C TDA1Q03533 586 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C DCI1Q08558 271 aa3.28□□□□□ -1.88
YDR034C-CYDR034C-C SKT5P34226 696 aa3.27□□□□□ -1.89
YDR034C-CYDR034C-C YKL097CP34245 136 aa3.27□□□□□ -1.89
YDR034C-CYDR034C-C YHK8P38776 514 aa3.27□□□□□ -1.89
YDR034C-CYDR034C-C YET2Q04210 160 aa3.27□□□□□ -1.89
YDR034C-CYDR034C-C SLM5P25345 492 aaKnown RBP3.26□□□□□ -1.89
YDR034C-CYDR034C-C CDC50P25656 391 aa3.26□□□□□ -1.89
YDR034C-CYDR034C-C RAD5P32849 1169 aaPredicted RBP3.26□□□□□ -1.89
YDR034C-CYDR034C-C BAT1P38891 393 aaKnown RBP3.26□□□□□ -1.89
YDR034C-CYDR034C-C ATG18P43601 500 aa3.26□□□□□ -1.89
YDR034C-CYDR034C-C BNS1P50084 137 aa3.26□□□□□ -1.89
YDR034C-CYDR034C-C VHS1Q03785 461 aa3.26□□□□□ -1.89
YDR034C-CYDR034C-C YLR345WQ06137 509 aa3.26□□□□□ -1.89
YDR034C-CYDR034C-C YCR024C-BQ3E7Z8 88 aa3.26□□□□□ -1.89
YDR034C-CYDR034C-C NAG1Q8TGN9 163 aa3.26□□□□□ -1.89
YDR034C-CYDR034C-C CHS6P40955 746 aa3.25□□□□□ -1.89
YDR034C-CYDR034C-C YGR117CP53270 476 aa3.25□□□□□ -1.89
YDR034C-CYDR034C-C TRM112P53738 135 aaPredicted RBP3.25□□□□□ -1.89
YDR034C-CYDR034C-C YDR341CQ05506 607 aaKnown RBP3.25□□□□□ -1.89
YDR034C-CYDR034C-C YLR456WQ06199 204 aa3.25□□□□□ -1.89
YDR034C-CYDR034C-C COX4P04037 155 aa3.24□□□□□ -1.89
YDR034C-CYDR034C-C ALG1P16661 449 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms