RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W RHB1P25378 209 aa5.59□□□□□ -1.51
TRP1YDR007W POT1P27796 417 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
TRP1YDR007W PRP21P32524 280 aaPredicted RBP5.59□□□□□ -1.51
TRP1YDR007W SMI1P32566 505 aa5.59□□□□□ -1.51
TRP1YDR007W SSE1P32589 693 aaKnown RBP5.59□□□□□ -1.51
TRP1YDR007W PDR3P33200 976 aa5.59□□□□□ -1.51
TRP1YDR007W PHD1P36093 366 aa5.59□□□□□ -1.51
TRP1YDR007W YPK3P38070 525 aa5.59□□□□□ -1.51
TRP1YDR007W SPP381P38282 291 aaPredicted RBP5.59□□□□□ -1.51
TRP1YDR007W FAD1P38913 306 aa5.59□□□□□ -1.51
TRP1YDR007W GAT1P43574 510 aa5.59□□□□□ -1.51
TRP1YDR007W GCD14P46959 383 aaPredicted RBP5.59□□□□□ -1.51
TRP1YDR007W MDV1P47025 714 aa5.59□□□□□ -1.51
TRP1YDR007W SNX4P47057 423 aa5.59□□□□□ -1.51
TRP1YDR007W KAP114P53067 1004 aa5.59□□□□□ -1.51
TRP1YDR007W MPS2P53159 387 aa5.59□□□□□ -1.51
TRP1YDR007W TOF1P53840 1238 aa5.59□□□□□ -1.51
TRP1YDR007W YNL181WP53878 407 aa5.59□□□□□ -1.51
TRP1YDR007W OCA2P53949 197 aa5.59□□□□□ -1.51
TRP1YDR007W KTR5P53966 522 aaPredicted RBP5.59□□□□□ -1.51
TRP1YDR007W IZH1Q03419 316 aa5.59□□□□□ -1.51
TRP1YDR007W RRN11Q04712 507 aa5.59□□□□□ -1.51
TRP1YDR007W UIP4Q08926 304 aa5.59□□□□□ -1.51
TRP1YDR007W ATX2Q12067 313 aa5.59□□□□□ -1.51
TRP1YDR007W ARP6Q12509 438 aa5.59□□□□□ -1.51
TRP1YDR007W NUP192P47054 1683 aa5.59□□□□□ -1.52
TRP1YDR007W CYB2P00175 591 aa5.58□□□□□ -1.52
TRP1YDR007W PDE2P06776 526 aa5.58□□□□□ -1.52
TRP1YDR007W MSS116P15424 664 aaKnown RBP5.58□□□□□ -1.52
TRP1YDR007W GLK1P17709 500 aaKnown RBP5.58□□□□□ -1.52
TRP1YDR007W CKI1P20485 582 aa5.58□□□□□ -1.52
TRP1YDR007W UBA1P22515 1024 aaKnown RBP5.58□□□□□ -1.52
TRP1YDR007W MRPL25P23369 157 aa5.58□□□□□ -1.52
TRP1YDR007W UTR4P32626 227 aa5.58□□□□□ -1.52
TRP1YDR007W PEX2P32800 271 aa5.58□□□□□ -1.52
TRP1YDR007W BUD2P33314 1104 aa5.58□□□□□ -1.52
TRP1YDR007W ERG7P38604 731 aa5.58□□□□□ -1.52
TRP1YDR007W YAP3P38749 330 aa5.58□□□□□ -1.52
TRP1YDR007W PDS1P40316 373 aaPredicted RBP5.58□□□□□ -1.52
TRP1YDR007W SNL1P40548 159 aa5.58□□□□□ -1.52
TRP1YDR007W FET5P43561 622 aa5.58□□□□□ -1.52
TRP1YDR007W HAM1P47119 197 aaKnown RBP5.58□□□□□ -1.52
TRP1YDR007W GPI1P53306 609 aa5.58□□□□□ -1.52
TRP1YDR007W FYV6P53913 173 aa5.58□□□□□ -1.52
TRP1YDR007W TMA20P89886 181 aaPredicted RBP5.58□□□□□ -1.52
TRP1YDR007W PNG1Q02890 363 aa5.58□□□□□ -1.52
TRP1YDR007W CSI1Q04368 295 aa5.58□□□□□ -1.52
TRP1YDR007W DYN3Q04949 312 aa5.58□□□□□ -1.52
TRP1YDR007W NSE1Q07913 336 aa5.58□□□□□ -1.52
TRP1YDR007W BUG1Q12191 341 aa5.58□□□□□ -1.52
TRP1YDR007W BBP1Q12365 385 aa5.58□□□□□ -1.52
TRP1YDR007W CEX1Q12453 761 aa5.58□□□□□ -1.52
TRP1YDR007W CAR1P00812 333 aaKnown RBP5.57□□□□□ -1.52
TRP1YDR007W STF1P01098 86 aa5.57□□□□□ -1.52
TRP1YDR007W LEU4P06208 619 aaKnown RBP5.57□□□□□ -1.52
TRP1YDR007W CMD1P06787 147 aaKnown RBP5.57□□□□□ -1.52
TRP1YDR007W ARO3P14843 370 aaKnown RBP5.57□□□□□ -1.52
TRP1YDR007W GEX1P25596 615 aa5.57□□□□□ -1.52
TRP1YDR007W BMH1P29311 267 aaKnown RBP5.57□□□□□ -1.52
TRP1YDR007W UBC6P33296 250 aaPredicted RBP5.57□□□□□ -1.52
TRP1YDR007W BMH2P34730 273 aaKnown RBP5.57□□□□□ -1.52
TRP1YDR007W ATF1P40353 525 aa5.57□□□□□ -1.52
TRP1YDR007W RTS2P40962 232 aa5.57□□□□□ -1.52
TRP1YDR007W GCD10P41814 478 aa5.57□□□□□ -1.52
TRP1YDR007W HSP31Q04432 237 aa5.57□□□□□ -1.52
TRP1YDR007W IVY1Q04934 453 aa5.57□□□□□ -1.52
TRP1YDR007W PHO92Q06390 306 aa5.57□□□□□ -1.52
TRP1YDR007W GET4Q12125 312 aa5.57□□□□□ -1.52
TRP1YDR007W YDR061WQ12298 539 aa5.57□□□□□ -1.52
TRP1YDR007W RPS3P05750 240 aaKnown RBP5.56□□□□□ -1.52
TRP1YDR007W RIM1P32445 135 aaKnown RBP5.56□□□□□ -1.52
TRP1YDR007W UIP5P36137 443 aa5.56□□□□□ -1.52
TRP1YDR007W ASC1P38011 319 aaKnown RBP5.56□□□□□ -1.52
TRP1YDR007W PFF1P38244 976 aa5.56□□□□□ -1.52
TRP1YDR007W SIF2P38262 535 aa5.56□□□□□ -1.52
TRP1YDR007W STP2P38704 541 aa5.56□□□□□ -1.52
TRP1YDR007W VMA22P38784 181 aa5.56□□□□□ -1.52
TRP1YDR007W PEX18P38855 283 aa5.56□□□□□ -1.52
TRP1YDR007W CCT2P39076 527 aaKnown RBP5.56□□□□□ -1.52
TRP1YDR007W MKT1P40850 830 aaKnown RBP5.56□□□□□ -1.52
TRP1YDR007W EPL1P43572 832 aa5.56□□□□□ -1.52
TRP1YDR007W YJR011CP47086 261 aaPredicted RBP5.56□□□□□ -1.52
TRP1YDR007W COS6P53344 381 aa5.56□□□□□ -1.52
TRP1YDR007W PGA2P53903 129 aa5.56□□□□□ -1.52
TRP1YDR007W SLD5Q03406 294 aa5.56□□□□□ -1.52
TRP1YDR007W SEG1Q04279 960 aa5.56□□□□□ -1.52
TRP1YDR007W MDM30Q05930 598 aa5.56□□□□□ -1.52
TRP1YDR007W MDM36Q06820 579 aa5.56□□□□□ -1.52
TRP1YDR007W YLR031WQ07978 186 aa5.56□□□□□ -1.52
TRP1YDR007W CLP1Q08685 445 aaPredicted RBP5.56□□□□□ -1.52
TRP1YDR007W RUP1Q12242 671 aa5.56□□□□□ -1.52
TRP1YDR007W HER1Q12276 1246 aa5.56□□□□□ -1.52
TRP1YDR007W SEY1Q99287 776 aa5.56□□□□□ -1.52
TRP1YDR007W UTP10P42945 1769 aaKnown RBP5.56□□□□□ -1.52
TRP1YDR007W SMY1P32364 656 aaKnown RBP5.55□□□□□ -1.52
TRP1YDR007W RCN1P36054 211 aa5.55□□□□□ -1.52
TRP1YDR007W MRX3P38172 270 aa5.55□□□□□ -1.52
TRP1YDR007W RFC3P38629 340 aa5.55□□□□□ -1.52
TRP1YDR007W YTA12P40341 825 aa5.55□□□□□ -1.52
TRP1YDR007W SAS2P40963 338 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms