RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W VPS17P32913 551 aa2.03□□□□□ -2.08
CDC50YCR094W SIP2P34164 415 aaKnown RBP2.03□□□□□ -2.08
CDC50YCR094W YNK1P36010 153 aaKnown RBP2.03□□□□□ -2.08
CDC50YCR094W CBP4P37267 147 aa2.03□□□□□ -2.08
CDC50YCR094W SPP381P38282 291 aaPredicted RBP2.03□□□□□ -2.08
CDC50YCR094W INM1P38710 295 aa2.03□□□□□ -2.08
CDC50YCR094W YDR089WP38966 869 aa2.03□□□□□ -2.08
CDC50YCR094W ISC1P40015 477 aaKnown RBP2.03□□□□□ -2.08
CDC50YCR094W PCL7P40186 285 aa2.03□□□□□ -2.08
CDC50YCR094W YIL089WP40500 205 aa2.03□□□□□ -2.08
CDC50YCR094W RRT5P43607 289 aa2.03□□□□□ -2.08
CDC50YCR094W RPA34P47006 233 aaPredicted RBP2.03□□□□□ -2.08
CDC50YCR094W MPP10P47083 593 aaKnown RBP2.03□□□□□ -2.08
CDC50YCR094W YIP1P53039 248 aa2.03□□□□□ -2.08
CDC50YCR094W DSL1P53847 754 aa2.03□□□□□ -2.08
CDC50YCR094W ABZ2Q03266 374 aa2.03□□□□□ -2.08
CDC50YCR094W URC2Q04411 772 aa2.03□□□□□ -2.08
CDC50YCR094W MSC3Q05812 728 aa2.03□□□□□ -2.08
CDC50YCR094W STE23Q06010 1027 aa2.03□□□□□ -2.08
CDC50YCR094W MRPL51Q06090 140 aaPredicted RBP2.03□□□□□ -2.08
CDC50YCR094W RTC5Q12108 567 aaKnown RBP2.03□□□□□ -2.08
CDC50YCR094W BUG1Q12191 341 aa2.03□□□□□ -2.08
CDC50YCR094W ATG34Q12292 412 aa2.03□□□□□ -2.08
CDC50YCR094W RRP36Q12481 300 aaPredicted RBP2.03□□□□□ -2.08
CDC50YCR094W NBL1Q3E7Y6 73 aa2.03□□□□□ -2.08
CDC50YCR094W SRN2Q99176 213 aa2.03□□□□□ -2.08
CDC50YCR094W OPI3P05375 206 aa2.02□□□□□ -2.09
CDC50YCR094W RPL12AP0CX53 165 aaKnown RBP2.02□□□□□ -2.09
CDC50YCR094W RPL12BP0CX54 165 aa2.02□□□□□ -2.09
CDC50YCR094W RNA14P25298 677 aaKnown RBP2.02□□□□□ -2.09
CDC50YCR094W CYS4P32582 507 aaKnown RBP2.02□□□□□ -2.09
CDC50YCR094W TOA2P32774 122 aa2.02□□□□□ -2.09
CDC50YCR094W PTK1P36002 662 aaPredicted RBP2.02□□□□□ -2.09
CDC50YCR094W FRE2P36033 711 aa2.02□□□□□ -2.09
CDC50YCR094W LYS1P38998 373 aaRIP-Chip data2.02□□□□□ -2.09not detected
CDC50YCR094W PCF11P39081 626 aaPredicted RBP2.02□□□□□ -2.09
CDC50YCR094W HAT2P39984 401 aa2.02□□□□□ -2.09
CDC50YCR094W PAC11P40960 533 aa2.02□□□□□ -2.09
CDC50YCR094W GWT1P47026 490 aa2.02□□□□□ -2.09
CDC50YCR094W PHB2P50085 310 aa2.02□□□□□ -2.09
CDC50YCR094W PIB2P53191 635 aa2.02□□□□□ -2.09
CDC50YCR094W RTT102P53330 157 aa2.02□□□□□ -2.09
CDC50YCR094W IRC15Q02733 499 aa2.02□□□□□ -2.09
CDC50YCR094W VPS20Q04272 221 aa2.02□□□□□ -2.09
CDC50YCR094W ECM7Q06200 448 aa2.02□□□□□ -2.09
CDC50YCR094W SKI7Q08491 747 aaPredicted RBP2.02□□□□□ -2.09
CDC50YCR094W YOR387CQ08910 206 aa2.02□□□□□ -2.09
CDC50YCR094W SRL2Q12020 392 aa2.02□□□□□ -2.09
CDC50YCR094W YPR022CQ12139 1133 aa2.02□□□□□ -2.09
CDC50YCR094W MDY2Q12285 212 aa2.02□□□□□ -2.09
CDC50YCR094W YER078W-AQ3E7A2 54 aa2.02□□□□□ -2.09
CDC50YCR094W CDC21P06785 304 aa2.01□□□□□ -2.09
CDC50YCR094W YCR100CP25606 316 aa2.01□□□□□ -2.09
CDC50YCR094W PPQ1P32945 549 aa2.01□□□□□ -2.09
CDC50YCR094W HMS2P47175 358 aa2.01□□□□□ -2.09
CDC50YCR094W YNR048WP53740 393 aa2.01□□□□□ -2.09
CDC50YCR094W FRE4P53746 719 aa2.01□□□□□ -2.09
CDC50YCR094W STD1Q02794 444 aa2.01□□□□□ -2.09
CDC50YCR094W PNG1Q02890 363 aa2.01□□□□□ -2.09
CDC50YCR094W RRB1Q04225 511 aaKnown RBP2.01□□□□□ -2.09
CDC50YCR094W HNT3Q08702 217 aa2.01□□□□□ -2.09
CDC50YCR094W AIM45Q12480 344 aaKnown RBP2.01□□□□□ -2.09
CDC50YCR094W RRP12Q12754 1228 aaKnown RBP2.01□□□□□ -2.09
CDC50YCR094W VPS63O13549 108 aa2□□□□□ -2.09
CDC50YCR094W DST1P07273 309 aa2□□□□□ -2.09
CDC50YCR094W RPC40P07703 335 aaKnown RBP2□□□□□ -2.09
CDC50YCR094W RPS16AP0CX51 143 aaKnown RBP2□□□□□ -2.09
CDC50YCR094W RPS16BP0CX52 143 aaKnown RBP2□□□□□ -2.09
CDC50YCR094W EXO70P19658 623 aa2□□□□□ -2.09
CDC50YCR094W ISY1P21374 235 aaPredicted RBP2□□□□□ -2.09
CDC50YCR094W TIP1P27654 210 aaPredicted RBP2□□□□□ -2.09
CDC50YCR094W NAM9P27929 486 aa2□□□□□ -2.09
CDC50YCR094W GLC7P32598 312 aaKnown RBP2□□□□□ -2.09
CDC50YCR094W RIB7P33312 244 aa2□□□□□ -2.09
CDC50YCR094W SKN1P33336 771 aa2□□□□□ -2.09
CDC50YCR094W YBR137WP38276 179 aa2□□□□□ -2.09
CDC50YCR094W YHR122WP38829 231 aa2□□□□□ -2.09
CDC50YCR094W YER079WP40052 210 aaKnown RBP2□□□□□ -2.09
CDC50YCR094W LOC1P43586 204 aaPredicted RBP2□□□□□ -2.09
CDC50YCR094W STE24P47154 453 aa2□□□□□ -2.09
CDC50YCR094W BRO1P48582 844 aa2□□□□□ -2.09
CDC50YCR094W AVT4P50944 713 aa2□□□□□ -2.09
CDC50YCR094W RRN9P53437 365 aa2□□□□□ -2.09
CDC50YCR094W HST1P53685 503 aa2□□□□□ -2.09
CDC50YCR094W COS1P53822 381 aa2□□□□□ -2.09
CDC50YCR094W PRM1P53835 661 aa2□□□□□ -2.09
CDC50YCR094W ODC1Q03028 310 aa2□□□□□ -2.09
CDC50YCR094W RSN1Q03516 953 aa2□□□□□ -2.09
CDC50YCR094W VPS74Q06385 345 aa2□□□□□ -2.09
CDC50YCR094W CUR1Q06469 252 aa2□□□□□ -2.09
CDC50YCR094W AAD15Q08361 143 aa2□□□□□ -2.09
CDC50YCR094W SGT1Q08446 395 aa2□□□□□ -2.09
CDC50YCR094W CBP2P03874 630 aaPredicted RBP1.99□□□□□ -2.09
CDC50YCR094W YAR066WP0CX18 203 aa1.99□□□□□ -2.09
CDC50YCR094W YHR214WP0CX19 203 aa1.99□□□□□ -2.09
CDC50YCR094W RNA1P11745 407 aaKnown RBP1.99□□□□□ -2.09
CDC50YCR094W SPT15P13393 240 aaKnown RBP1.99□□□□□ -2.09
CDC50YCR094W THR4P16120 514 aaKnown RBP1.99□□□□□ -2.09
CDC50YCR094W GRR1P24814 1151 aa1.99□□□□□ -2.09
CDC50YCR094W MRPL40P36534 297 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms