RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	GEP3	Q08622	556 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	FMP16	Q12497	93 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	IMA3	P0CW40	589 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	IMA4	P0CW41	589 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	EXO70	P19658	623 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	VPS3	P23643	1011 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	DBR1	P24309	405 aa	Known RBP	4.63	□□□□□ -1.67
SMP1	YBR182C	RPS2	P25443	254 aa	Known RBP	4.63	□□□□□ -1.67
SMP1	YBR182C	CIN8	P27895	1000 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	DPH5	P32469	300 aa	Predicted RBP	4.63	□□□□□ -1.67
SMP1	YBR182C	LYS1	P38998	373 aa	RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
SMP1	YBR182C	RCY1	P39531	840 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	PAC2	P39937	518 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	YMR134W	P40207	237 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	LYS12	P40495	371 aa	Known RBP	4.63	□□□□□ -1.67
SMP1	YBR182C	UTP25	P40498	721 aa	Known RBP	4.63	□□□□□ -1.67
SMP1	YBR182C	YDL186W	P48568	277 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	AIM33	Q04516	312 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	ATG38	Q05789	226 aa	Known RBP	4.63	□□□□□ -1.67
SMP1	YBR182C	SHS1	Q07657	551 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	LDS2	Q08218	356 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	IMA2	Q08295	589 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	PFA4	Q12006	378 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	YRM1	Q12340	786 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	RRI1	Q12468	440 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	AIM45	Q12480	344 aa	Known RBP	4.63	□□□□□ -1.67
SMP1	YBR182C	ARP6	Q12509	438 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	YLR111W	Q12528	110 aa		4.63	□□□□□ -1.67
SMP1	YBR182C	MAS2	P11914	482 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	CLN3	P13365	580 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	SPO11	P23179	398 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	PPZ1	P26570	692 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	DOA4	P32571	926 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	SPR1	P32603	445 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	YBR056W	P38081	501 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	ISC1	P40015	477 aa	Known RBP	4.62	□□□□□ -1.67
SMP1	YBR182C	LCP5	P40079	357 aa	Predicted RBP	4.62	□□□□□ -1.67
SMP1	YBR182C	VPS25	P47142	202 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	PMT5	P52867	743 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	YIP1	P53039	248 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	YNL234W	P53857	426 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	YNL050C	P53952	270 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	PNG1	Q02890	363 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	CAC2	Q04199	468 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	SGT1	Q08446	395 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	NRT1	Q08485	598 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	SKI7	Q08491	747 aa	Predicted RBP	4.62	□□□□□ -1.67
SMP1	YBR182C	RKM5	Q12367	367 aa		4.62	□□□□□ -1.67
SMP1	YBR182C	RNA1	P11745	407 aa	Known RBP	4.61	□□□□□ -1.67
SMP1	YBR182C	CDC23	P16522	626 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	SPS22	P25380	463 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	COX13	P32799	129 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	MNS1	P32906	549 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	ECT1	P33412	323 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	YNK1	P36010	153 aa	Known RBP	4.61	□□□□□ -1.67
SMP1	YBR182C	RSM22	P36056	628 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	PHD1	P36093	366 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	SCC4	P40090	624 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	CSM2	P40465	213 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SMP1	YBR182C	STE24	P47154	453 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	CGR1	P53188	120 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	YPL068C	Q02749	293 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	INP2	Q03824	705 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	BUR2	Q05949	395 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	GPN3	Q06543	272 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	DNL4	Q08387	944 aa	Predicted RBP	4.61	□□□□□ -1.67
SMP1	YBR182C	YPR1	Q12458	312 aa		4.61	□□□□□ -1.67
SMP1	YBR182C	PRP16	P15938	1071 aa	Predicted RBP	4.6	□□□□□ -1.67
SMP1	YBR182C	CDC42	P19073	191 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	CKI1	P20485	582 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	MRPL25	P23369	157 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	ADY2	P25613	283 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	HXT1	P32465	570 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SMP1	YBR182C	TAE1	P38340	232 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	LEU5	P38702	357 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	FET3	P38993	636 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	YGL082W	P53155	381 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	YNL134C	P53912	376 aa	Known RBP	4.6	□□□□□ -1.67
SMP1	YBR182C	SAM50	P53969	484 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	YMR102C	Q03177	834 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	RSN1	Q03516	953 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	COQ11	Q05892	277 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	ASA1	Q06822	443 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	CLP1	Q08685	445 aa	Predicted RBP	4.6	□□□□□ -1.67
SMP1	YBR182C	ORT1	Q12375	292 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	ADF1	Q2V2Q1	113 aa		4.6	□□□□□ -1.67
SMP1	YBR182C	ARG4	P04076	463 aa	Predicted RBP	4.59	□□□□□ -1.67
SMP1	YBR182C	ATP1	P07251	545 aa	Known RBP	4.59	□□□□□ -1.67
SMP1	YBR182C	YAR066W	P0CX18	203 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	YHR214W	P0CX19	203 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	URE2	P23202	354 aa	Known RBP	4.59	□□□□□ -1.67
SMP1	YBR182C	COQ3	P27680	312 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	MSN4	P33749	630 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	YCR041W	P37265	110 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	OSH3	P38713	996 aa	Known RBP	4.59	□□□□□ -1.67
SMP1	YBR182C	INA22	P40576	216 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	PHB2	P50085	310 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	FRE4	P53746	719 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms