RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	AAP1	P37898	856 aa	Known RBP	6.65	□□□□□ -1.34
UBP13	YBL067C	CCT2	P39076	527 aa	Known RBP	6.65	□□□□□ -1.34
UBP13	YBL067C	YNL092W	P53934	400 aa		6.65	□□□□□ -1.34
UBP13	YBL067C	GCN5	Q03330	439 aa		6.65	□□□□□ -1.34
UBP13	YBL067C	PLB2	Q03674	706 aa		6.65	□□□□□ -1.34
UBP13	YBL067C	AMD2	P22580	549 aa		6.65	□□□□□ -1.35
UBP13	YBL067C	ACH1	P32316	526 aa		6.65	□□□□□ -1.35
UBP13	YBL067C	ZUO1	P32527	433 aa	Known RBP	6.65	□□□□□ -1.35
UBP13	YBL067C	BNA4	P38169	460 aa		6.65	□□□□□ -1.35
UBP13	YBL067C	SAP1	P39955	897 aa	Known RBP	6.65	□□□□□ -1.35
UBP13	YBL067C	THO1	P40040	218 aa	Known RBP	6.65	□□□□□ -1.35
UBP13	YBL067C	LSM1	P47017	172 aa	Known RBP	6.65	□□□□□ -1.35
UBP13	YBL067C	LYS20	P48570	428 aa	Known RBP	6.65	□□□□□ -1.35
UBP13	YBL067C	UBP16	Q02863	499 aa		6.65	□□□□□ -1.35
UBP13	YBL067C	GIS1	Q03833	894 aa		6.65	□□□□□ -1.35
UBP13	YBL067C	TRM13	Q12383	476 aa		6.65	□□□□□ -1.35
UBP13	YBL067C	TRM11	Q12463	433 aa		6.65	□□□□□ -1.35
UBP13	YBL067C	RAD1	P06777	1100 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	6.64	□□□□□ -1.35	not detected
UBP13	YBL067C	VMA6	P32366	345 aa	Known RBP	6.64	□□□□□ -1.35
UBP13	YBL067C	RGT1	P32862	1170 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	SDH8	P38345	138 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	SPC97	P38863	823 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	MBB1	P39534	108 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	COA1	P40452	197 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	RPC17	P47076	161 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	PRM15	Q03262	622 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	YMR226C	Q05016	267 aa	Known RBP	6.64	□□□□□ -1.35
UBP13	YBL067C	YPR147C	Q06522	304 aa	Known RBP	6.64	□□□□□ -1.35
UBP13	YBL067C	SYO1	Q07395	620 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	THI3	Q07471	609 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	GPM2	Q12008	311 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	SPS4	P09937	338 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	FBA1	P14540	359 aa	Known RBP	6.64	□□□□□ -1.35
UBP13	YBL067C	RFA3	P26755	122 aa	Known RBP	6.64	□□□□□ -1.35
UBP13	YBL067C	NUF2	P33895	451 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	AST1	P35183	429 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	LNP1	P38878	278 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	UTP25	P40498	721 aa	Known RBP	6.64	□□□□□ -1.35
UBP13	YBL067C	AIR1	P40507	360 aa	Known RBP	6.64	□□□□□ -1.35
UBP13	YBL067C	YFR057W	P43625	151 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	BIO4	P53630	237 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	VAC7	P53950	1165 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	SSY1	Q03770	852 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	SIZ1	Q04195	904 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	PEX27	Q08580	376 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	PNS1	Q12412	539 aa		6.64	□□□□□ -1.35
UBP13	YBL067C	RPS3	P05750	240 aa	Known RBP	6.63	□□□□□ -1.35
UBP13	YBL067C	ADE5,7	P07244	802 aa	Known RBP	6.63	□□□□□ -1.35
UBP13	YBL067C	RPS4A	P0CX35	261 aa	Known RBP	6.63	□□□□□ -1.35
UBP13	YBL067C	RPS4B	P0CX36	261 aa	Known RBP	6.63	□□□□□ -1.35
UBP13	YBL067C	BCS1	P32839	456 aa		6.63	□□□□□ -1.35
UBP13	YBL067C	SKG6	P32900	734 aa	Predicted RBP	6.63	□□□□□ -1.35
UBP13	YBL067C	SOR1	P35497	357 aa	Known RBP	6.63	□□□□□ -1.35
UBP13	YBL067C	OLA1	P38219	394 aa	Known RBP	6.63	□□□□□ -1.35
UBP13	YBL067C	ECM10	P39987	644 aa		6.63	□□□□□ -1.35
UBP13	YBL067C	YPT11	P48559	417 aa		6.63	□□□□□ -1.35
UBP13	YBL067C	TOS2	P50078	622 aa		6.63	□□□□□ -1.35
UBP13	YBL067C	BUR2	Q05949	395 aa		6.63	□□□□□ -1.35
UBP13	YBL067C	SOR2	Q07786	357 aa		6.63	□□□□□ -1.35
UBP13	YBL067C	SCEI	P03882	235 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	RPP1A	P05318	106 aa	Predicted RBP	6.62	□□□□□ -1.35
UBP13	YBL067C	CBS2	P14905	389 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	SAC7	P17121	654 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	STE18	P18852	110 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	YSR3	P23501	404 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	VBA2	P38358	474 aa	Known RBP	6.62	□□□□□ -1.35
UBP13	YBL067C	ARP1	P38696	384 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	ECM1	P39715	212 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	FRT2	P39734	528 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	GAT2	P40209	560 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	YGR210C	P42942	411 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	CDC14	Q00684	551 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	RPS15	Q01855	142 aa	Known RBP	6.62	□□□□□ -1.35
UBP13	YBL067C	SNF8	Q12483	233 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	COR1	P07256	457 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	PDC5	P16467	563 aa	Known RBP	6.62	□□□□□ -1.35
UBP13	YBL067C	RPL24B	P24000	155 aa	Known RBP	6.62	□□□□□ -1.35
UBP13	YBL067C	LIP5	P32875	414 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	HES1	P35843	434 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	FIG1	P38224	298 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	ALG8	P40351	577 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	AGP3	P43548	558 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	6.62	□□□□□ -1.35	RIP-Chip
UBP13	YBL067C	FAR3	P46671	204 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	NIF3	P53081	288 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	PRP38	Q00723	242 aa	Predicted RBP	6.62	□□□□□ -1.35
UBP13	YBL067C	CTF19	Q02732	369 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	MMT1	Q03218	510 aa		6.62	□□□□□ -1.35
UBP13	YBL067C	ACK1	Q07622	623 aa	Predicted RBP	6.62	□□□□□ -1.35
UBP13	YBL067C	HIS4	P00815	799 aa	Known RBP	6.61	□□□□□ -1.35
UBP13	YBL067C	CNE1	P27825	502 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	HMT1	P38074	348 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	YHL012W	P38709	493 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	UIP3	P39547	235 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	POG1	P40473	351 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	BNA3	P47039	444 aa	Known RBP	6.61	□□□□□ -1.35
UBP13	YBL067C	VMA10	P48836	114 aa	Known RBP	6.61	□□□□□ -1.35
UBP13	YBL067C	YNL140C	P53910	189 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	COQ11	Q05892	277 aa		6.61	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms