RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PPP1R1BQ9UD71 204 aaPredicted RBP3.72□□□□□ -1.81
SMARCB1-208ENST00000634926 TMEFF2Q9UIK5 374 aaPredicted RBP3.72□□□□□ -1.81
SMARCB1-208ENST00000634926 PCDHGB7Q9Y5F8 929 aa3.72□□□□□ -1.81
SMARCB1-208ENST00000634926 CDC42BPBQ9Y5S2 1711 aa3.72□□□□□ -1.81
SMARCB1-208ENST00000634926 ARHGAP35Q9NRY4 1499 aa3.72□□□□□ -1.81
SMARCB1-208ENST00000634926 ITSN2Q9NZM3 1697 aa3.71□□□□□ -1.81
SMARCB1-208ENST00000634926 ABCC1P33527 1531 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 ATP2B1P20020 1258 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 COMTP21964 271 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 GJA8P48165 433 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 ATXN1P54253 815 aaKnown RBP3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 SCRN1Q12765 414 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 VPS37DQ86XT2 251 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 RIOX2Q8IUF8 465 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 CCDC103Q8IW40 242 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 Q8N1Y9 231 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 GIMAP8Q8ND71 665 aaPredicted RBP3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 FRS2Q8WU20 508 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 KLHL6Q8WZ60 621 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 PLEKHG4BQ96PX9 1271 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 APEX2Q9UBZ4 518 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 INPP5FQ9Y2H2 1132 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 X6R8D5 127 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 DENND4BO75064 1496 aaPredicted RBP3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 PLXNC1O60486 1568 aa3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 ZNF142P52746 1687 aaPredicted RBP3.71□□□□□ -1.82
SMARCB1-208ENST00000634926 AKNAQ7Z591 1439 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 AGLP35573 1532 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 CDC42BPAQ5VT25 1732 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 TADA3O75528 432 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 ZNF888P0CJ79 500 aaPredicted RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 GJA4P35212 333 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 BCL6P41182 706 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 KRTAP10-11P60412 298 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 ARID5AQ03989 594 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 DUSP8Q13202 625 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 GRB10Q13322 594 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 NOLC1Q14978 699 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 CSRP2Q16527 193 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 GNPTABQ3T906 1256 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 HEATR6Q6AI08 1181 aaKnown RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 MAMDC4Q6UXC1 1216 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 CEP68Q76N32 757 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 ADAT2Q7Z6V5 191 aaKnown RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 RALYLQ86SE5 291 aaKnown RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 RBBP8NLQ8NC74 664 aaPredicted RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 NTN5Q8WTR8 489 aaPredicted RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 NEIL1Q96FI4 390 aaPredicted RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 AJUBAQ96IF1 538 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 YIPF4Q9BSR8 244 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 NGRNQ9NPE2 291 aaKnown RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 HECAQ9UBI9 543 aaPredicted RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 ZNF652Q9Y2D9 606 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 INO80Q9ULG1 1556 aaPredicted RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 MROH2AA6NES4 1674 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 C3P01024 1663 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 KIDINS220Q9ULH0 1771 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 PLCH2O75038 1416 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 C9orf84Q5VXU9 1444 aa3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 TTBK1Q5TCY1 1321 aaPredicted RBP3.7□□□□□ -1.82
SMARCB1-208ENST00000634926 ZNF518AQ6AHZ1 1483 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 TRBV23OR9-2A0A075B6M9 112 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 PPFIA2O75334 1257 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 KNG1P01042 644 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 DNAJA1P31689 397 aaKnown RBP3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 RBL2Q08999 1139 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 MROH9Q5TGP6 573 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 DPH6Q7L8W6 267 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 MRGPRGQ86SM5 289 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 NPLOC4Q8TAT6 608 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 RASGRP4Q8TDF6 673 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 RCC1LQ96I51 464 aaKnown RBP3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 TMEM209Q96SK2 561 aa3.69□□□□□ -1.82
SMARCB1-208ENST00000634926 SAMD9LQ8IVG5 1584 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 MLH3Q9UHC1 1453 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 KRTAP29-1A8MX34 341 aaPredicted RBP3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 MATN2O00339 956 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 RAD17O75943 681 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 KCNH1O95259 989 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 RAPGEF3O95398 923 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 ATF4P18848 351 aaPredicted RBP3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 CANXP27824 592 aaKnown RBP3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 GTF2F1P35269 517 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 PAK2Q13177 524 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 TUBA3CQ13748 450 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 SOGA3Q5TF21 947 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 FBXW10Q5XX13 1052 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 TUBA3EQ6PEY2 450 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 KIAA0825Q8IV33 1275 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 ZNF808Q8N4W9 903 aaPredicted RBP3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 DTX3Q8N9I9 347 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 GPRASP2Q96D09 838 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 SPATA32Q96LK8 384 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 FERD3LQ96RJ6 166 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 DPYSL5Q9BPU6 564 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 SPON2Q9BUD6 331 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 LTBP4Q8N2S1 1624 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 TROQ12816 1431 aaPredicted RBP3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 FMN1Q68DA7 1419 aa3.68□□□□□ -1.82
SMARCB1-208ENST00000634926 ATP10AO60312 1499 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms