RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SH3RF1Q7Z6J0 888 aa15.82■□□□□ 0.12
SNRPA1-216ENST00000626000 TDHQ8IZJ6 230 aa15.82■□□□□ 0.12
SNRPA1-216ENST00000626000 OXER1Q8TDS5 423 aa15.82■□□□□ 0.12
SNRPA1-216ENST00000626000 BADQ92934 168 aa15.82■□□□□ 0.12
SNRPA1-216ENST00000626000 GJB4Q9NTQ9 266 aa15.82■□□□□ 0.12
SNRPA1-216ENST00000626000 CEP131Q9UPN4 1083 aa15.82■□□□□ 0.12
SNRPA1-216ENST00000626000 COLQQ9Y215 455 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-216ENST00000626000 SAMM50Q9Y512 469 aa15.82■□□□□ 0.12
SNRPA1-216ENST00000626000 TDP2O95551 362 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 COL1A2P08123 1366 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 PDIA4P13667 645 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 PPFIA1Q13136 1202 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 NR5A1Q13285 461 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 GDF6Q6KF10 455 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 FAM43BQ6ZT52 329 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 RSPH3Q86UC2 560 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 SERINC5Q86VE9 423 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 ETNPPLQ8TBG4 499 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 ATP6V0A1Q93050 837 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 INTS4Q96HW7 963 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 BCAS3Q9H6U6 928 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 KCNMB3Q9NPA1 279 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 ZNF302Q9NR11 478 aa15.81■□□□□ 0.12
SNRPA1-216ENST00000626000 H3BQV1 296 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 DDX39AO00148 427 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 HBP1O60381 514 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 NEMFO60524 1076 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 PSMD10O75832 226 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 CD2BP2O95400 341 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 CCNE2O96020 404 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 CUL4AQ13619 759 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 PDXDC2PQ6P474 469 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 TRIM50Q86XT4 487 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 NOSTRINQ8IVI9 506 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 SNX21Q969T3 373 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 DISC1Q9NRI5 854 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 TRPC6Q9Y210 931 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 MYH9P35579 1960 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 TANC1Q9C0D5 1861 aa15.8■□□□□ 0.12
SNRPA1-216ENST00000626000 POTEB3A0JP26 581 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 K7ELQ4 463 aaPredicted RBP15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 CYP2C9P11712 490 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 SELPP16109 830 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 U2AF2P26368 475 aaKnown RBP eCLIP15.79■□□□□ 0.122e-6■□□□□ 8.1
SNRPA1-216ENST00000626000 GJB2P29033 226 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 PPP2R5CQ13362 524 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 POTEBQ6S5H4 581 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 RPAINQ86UA6 219 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 ZNF710Q8N1W2 664 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 ATP8B4Q8TF62 1192 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 LMBR1Q8WVP7 490 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 BBXQ8WY36 941 aaPredicted RBP15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 RNPEPQ9H4A4 650 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 IL23AQ9NPF7 189 aa15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 MAFBQ9Y5Q3 323 aaPredicted RBP15.79■□□□□ 0.12
SNRPA1-216ENST00000626000 IGSF9BQ9UPX0 1349 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 EDIL3O43854 480 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 ACTN1P12814 892 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 CYP2C18P33260 490 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 FOSBP53539 338 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 GUCY1B3Q02153 619 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 GRIK4Q16099 956 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 CALCRLQ16602 461 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 ZNF484Q5JVG2 852 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 HABP4Q5JVS0 413 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 LRRC8DQ7L1W4 858 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 HSCBQ8IWL3 235 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 CKAP2LQ8IYA6 745 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 TUBE1Q9UJT0 475 aa15.78■□□□□ 0.12
SNRPA1-216ENST00000626000 MBLAC1A4D2B0 266 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 LAD1O00515 517 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 SLC37A4O43826 429 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 ITGB8P26012 769 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 MARK3P27448 753 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 ADAM17P78536 824 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 PLCB4Q15147 1175 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 LRIT3Q3SXY7 679 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 RILPL1Q5EBL4 403 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 LARP1BQ659C4 914 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 SWSAP1Q6NVH7 229 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 CCDC60Q8IWA6 550 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 NEK9Q8TD19 979 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 PCYT2Q99447 389 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 NRBP2Q9NSY0 501 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 SETD4Q9NVD3 440 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 PCDHA12Q9UN75 941 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 PPME1Q9Y570 386 aa15.77■□□□□ 0.12
SNRPA1-216ENST00000626000 EFCAB14O75071 495 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 IQCF3P0C7M6 154 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 CKBP12277 381 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 INSRRP14616 1297 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 CSF2RAP15509 400 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 B3GNT9Q6UX72 402 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 EXOC8Q8IYI6 725 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 RAB34Q9BZG1 259 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 WNT8AQ9H1J5 351 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 UNC45AQ9H3U1 944 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 GABBR1Q9UBS5 961 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms