RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 TSPY4P0CV99 314 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 TSPY10P0CW01 314 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 TOP1P11387 765 aaKnown RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 MYCLP1P12525 358 aaPredicted RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 ALADP13716 330 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 ENPP1P22413 925 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 CCNCP24863 283 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 S100A5P33763 92 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 HOXD12P35452 270 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 KRT9P35527 623 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 MLH1P40692 756 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 SERPINB8P50452 374 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 MRPS25P82663 173 aaKnown RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 ATP2B2Q01814 1243 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 AKAP17AQ02040 695 aaKnown RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 GSTM4Q03013 218 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 SPIDRQ14159 915 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 MVPQ14764 893 aaKnown RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 CASP8Q14790 479 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 SEPT2Q15019 361 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 MAP3K11Q16584 847 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 TRIM71Q2Q1W2 868 aaKnown RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 CCDC144BQ3MJ40 725 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 CCDC153Q494R4 210 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 LACTB2Q53H82 288 aaPredicted RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 BOLA3Q53S33 107 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 COBLL1Q53SF7 1204 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 CCDC122Q5T0U0 273 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 E4F1Q66K89 784 aaPredicted RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 GALNT17Q6IS24 598 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 WDR93Q6P2C0 686 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 NANOGNBQ7Z5D8 188 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 ZNF554Q86TJ5 538 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 USP48Q86UV5 1035 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 ARHGEF25Q86VW2 580 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 CHD1LQ86WJ1 897 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 CCDC144CPQ8IYA2 1237 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 SLC7A5P1Q8MH63 180 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 FUKQ8N0W3 1084 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 ARHGAP18Q8N392 663 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 TTC30BQ8N4P2 665 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 TMEM102Q8N9M5 508 aaPredicted RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 SLC43A3Q8NBI5 491 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 NSUN7Q8NE18 718 aaKnown RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 CFAP61Q8NHU2 1237 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 SHKBP1Q8TBC3 707 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 BCAS4Q8TDM0 211 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 NSMCE1Q8WV22 266 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 IFT81Q8WYA0 676 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 IRGQQ8WZA9 623 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 NCSTNQ92542 709 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 SNX27Q96L92 541 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 MFSD14AQ96MC6 490 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 PRAM1Q96QH2 718 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 SH3GL2Q99962 352 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 FAM83CQ9BQN1 747 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 CARD6Q9BX69 1037 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 RTFDC1Q9BY42 306 aaPredicted RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 NACAP1Q9BZK3 213 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 TRIM5Q9C035 493 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 FAM192AQ9GZU8 254 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 TAOK3Q9H2K8 898 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 DCTPP1Q9H773 170 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 CBX8Q9HC52 389 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 DDX19AQ9NUU7 478 aaKnown RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.87□□□□□ -1.79
SMC5-204ENST00000618375 NLRP2Q9NX02 1062 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 COMMD8Q9NX08 183 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 TRMT1Q9NXH9 659 aaKnown RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 AATFQ9NY61 560 aaKnown RBP eCLIP3.87□□□□□ -1.79
SMC5-204ENST00000618375 SLC5A4Q9NY91 659 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 NDUFA13Q9P0J0 144 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 HESX1Q9UBX0 185 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 PCSK1NQ9UHG2 260 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 FOXD3Q9UJU5 478 aaPredicted RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 TPCN1Q9ULQ1 816 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 CEP131Q9UPN4 1083 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 ZNF652Q9Y2D9 606 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 AMOTL2Q9Y2J4 779 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 HIF3AQ9Y2N7 669 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 MYPNQ86TC9 1320 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 MYO5CQ9NQX4 1742 aa3.87□□□□□ -1.79
SMC5-204ENST00000618375 KDM6AO15550 1401 aaPredicted RBP3.87□□□□□ -1.79
SMC5-204ENST00000618375 ADGRL1O94910 1474 aa3.86□□□□□ -1.79
SMC5-204ENST00000618375 ABCC10Q5T3U5 1492 aa3.86□□□□□ -1.79
SMC5-204ENST00000618375 EIF4G3O43432 1585 aaKnown RBP3.86□□□□□ -1.79
SMC5-204ENST00000618375 TRPM1Q7Z4N2 1603 aa3.86□□□□□ -1.79
SMC5-204ENST00000618375 CFAP73A6NFT4 308 aa3.86□□□□□ -1.79
SMC5-204ENST00000618375 BECN2A8MW95 431 aa3.86□□□□□ -1.79
SMC5-204ENST00000618375 TTC34A8MYJ7 566 aa3.86□□□□□ -1.79
SMC5-204ENST00000618375 GOLGA8KD6RF30 607 aa3.86□□□□□ -1.79
SMC5-204ENST00000618375 BOLA2-SMG1P6H3BVE0 249 aa3.86□□□□□ -1.79
SMC5-204ENST00000618375 NFKBIEO00221 500 aa3.86□□□□□ -1.79
SMC5-204ENST00000618375 SOX1O00570 391 aaPredicted RBP3.86□□□□□ -1.79
SMC5-204ENST00000618375 LSM1O15116 133 aaKnown RBP3.86□□□□□ -1.79
SMC5-204ENST00000618375 PRPF3O43395 683 aaKnown RBP3.86□□□□□ -1.79
SMC5-204ENST00000618375 USO1O60763 962 aaKnown RBP3.86□□□□□ -1.79
SMC5-204ENST00000618375 PEX14O75381 377 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms