RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 AEBP2Q6ZN18 517 aaPredicted RBP13.11□□□□□ -0.31
SMC5-204ENST00000618375 CHIC1Q5VXU3 224 aa12.58□□□□□ -0.4
SMC5-204ENST00000618375 SENP3Q9H4L4 574 aaPredicted RBP11.26□□□□□ -0.61
SMC5-204ENST00000618375 PHF23Q9BUL5 403 aaPredicted RBP11.11□□□□□ -0.63
SMC5-204ENST00000618375 FOXD1Q16676 465 aa10.44□□□□□ -0.74
SMC5-204ENST00000618375 PLPPR3Q6T4P5 718 aa10.15□□□□□ -0.78
SMC5-204ENST00000618375 PIAS4Q8N2W9 510 aaPredicted RBP9.85□□□□□ -0.83
SMC5-204ENST00000618375 ADRA2BP18089 450 aa9.83□□□□□ -0.84
SMC5-204ENST00000618375 PPP6R1Q9UPN7 881 aa9.81□□□□□ -0.84
SMC5-204ENST00000618375 MSH5O43196 834 aa9.79□□□□□ -0.84
SMC5-204ENST00000618375 POTEDQ86YR6 584 aa9.35□□□□□ -0.91
SMC5-204ENST00000618375 SCAF1Q9H7N4 1312 aaKnown RBP9.06□□□□□ -0.96
SMC5-204ENST00000618375 MAPK8IP2Q13387 824 aaPredicted RBP8.99□□□□□ -0.97
SMC5-204ENST00000618375 DMRT2Q9Y5R5 561 aa8.9□□□□□ -0.98
SMC5-204ENST00000618375 PPP4R3CPQ6ZMV5 832 aa8.89□□□□□ -0.99
SMC5-204ENST00000618375 CNKSR2Q8WXI2 1034 aa8.7□□□□□ -1.02
SMC5-204ENST00000618375 DCAF8L1A6NGE4 600 aa8.69□□□□□ -1.02
SMC5-204ENST00000618375 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
SMC5-204ENST00000618375 RNF216Q9NWF9 866 aaPredicted RBP8.59□□□□□ -1.03
SMC5-204ENST00000618375 HOXD11P31277 338 aaPredicted RBP8.58□□□□□ -1.04
SMC5-204ENST00000618375 NPM3O75607 178 aaKnown RBP8.44□□□□□ -1.06
SMC5-204ENST00000618375 CACNB1Q02641 598 aaPredicted RBP8.38□□□□□ -1.07
SMC5-204ENST00000618375 KCNA4P22459 653 aa8.37□□□□□ -1.07
SMC5-204ENST00000618375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMC5-204ENST00000618375 RNF39Q9H2S5 420 aa8.31□□□□□ -1.08
SMC5-204ENST00000618375 DNAJC5BQ9UF47 199 aa8.25□□□□□ -1.09
SMC5-204ENST00000618375 C1QBPQ07021 282 aaKnown RBP8.23□□□□□ -1.09
SMC5-204ENST00000618375 U3KPZ7 1027 aaPredicted RBP8.04□□□□□ -1.12
SMC5-204ENST00000618375 CAPN15O75808 1086 aa7.99□□□□□ -1.13
SMC5-204ENST00000618375 SLC4A2P04920 1241 aa7.99□□□□□ -1.13
SMC5-204ENST00000618375 SLC4A1APQ9BWU0 796 aaKnown RBP7.96□□□□□ -1.14
SMC5-204ENST00000618375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.94□□□□□ -1.14
SMC5-204ENST00000618375 APLP2Q06481 763 aa7.94□□□□□ -1.14
SMC5-204ENST00000618375 HNRNPUL2Q1KMD3 747 aaKnown RBP7.94□□□□□ -1.14
SMC5-204ENST00000618375 SPINK5Q9NQ38 1064 aaPredicted RBP7.93□□□□□ -1.14
SMC5-204ENST00000618375 TRHP20396 242 aaPredicted RBP7.88□□□□□ -1.15
SMC5-204ENST00000618375 SAMD1Q6SPF0 538 aaPredicted RBP7.88□□□□□ -1.15
SMC5-204ENST00000618375 MYCNP04198 464 aaPredicted RBP7.84□□□□□ -1.15
SMC5-204ENST00000618375 ZNF219Q9P2Y4 722 aaPredicted RBP7.84□□□□□ -1.15
SMC5-204ENST00000618375 DSG3P32926 999 aa7.82□□□□□ -1.16
SMC5-204ENST00000618375 FOXD4L1Q9NU39 408 aa7.8□□□□□ -1.16
SMC5-204ENST00000618375 ABCB7O75027 752 aa7.78□□□□□ -1.16
SMC5-204ENST00000618375 ZBTB22O15209 634 aa7.65□□□□□ -1.18
SMC5-204ENST00000618375 POLA2Q14181 598 aa7.65□□□□□ -1.18
SMC5-204ENST00000618375 ATF5Q9Y2D1 282 aaPredicted RBP7.59□□□□□ -1.19
SMC5-204ENST00000618375 RBM42Q9BTD8 480 aaKnown RBP7.53□□□□□ -1.2
SMC5-204ENST00000618375 ATXN8OSP0DMR3 200 aa7.52□□□□□ -1.21
SMC5-204ENST00000618375 ZBTB12Q9Y330 459 aaPredicted RBP7.52□□□□□ -1.21
SMC5-204ENST00000618375 EHMT2Q96KQ7 1210 aa7.47□□□□□ -1.21
SMC5-204ENST00000618375 FBLN2P98095 1184 aa7.4□□□□□ -1.22
SMC5-204ENST00000618375 OSCARQ8IYS5 282 aa7.4□□□□□ -1.22
SMC5-204ENST00000618375 CSRNP3Q8WYN3 585 aa7.4□□□□□ -1.22
SMC5-204ENST00000618375 POTEHQ6S545 545 aa7.38□□□□□ -1.23
SMC5-204ENST00000618375 AKT1S1Q96B36 256 aa7.34□□□□□ -1.23
SMC5-204ENST00000618375 CHRDL2Q6WN34 429 aa7.3□□□□□ -1.24
SMC5-204ENST00000618375 REM2Q8IYK8 340 aaPredicted RBP7.27□□□□□ -1.25
SMC5-204ENST00000618375 SPDYE2BA6NHP3 402 aa7.26□□□□□ -1.25
SMC5-204ENST00000618375 SPDYE6P0CI01 402 aa7.26□□□□□ -1.25
SMC5-204ENST00000618375 SPDYE2Q495Y8 402 aa7.26□□□□□ -1.25
SMC5-204ENST00000618375 MKRN4PQ13434 485 aaPredicted RBP7.24□□□□□ -1.25
SMC5-204ENST00000618375 ZNF692Q9BU19 519 aaPredicted RBP7.23□□□□□ -1.25
SMC5-204ENST00000618375 PITPNM1O00562 1244 aa7.18□□□□□ -1.26
SMC5-204ENST00000618375 CLEC11AQ9Y240 323 aa7.18□□□□□ -1.26
SMC5-204ENST00000618375 SPDYE1Q8NFV5 336 aaPredicted RBP7.14□□□□□ -1.27
SMC5-204ENST00000618375 PABPN1Q86U42 306 aaKnown RBP eCLIP7.12□□□□□ -1.27
SMC5-204ENST00000618375 PIP4P2Q8N4L2 257 aa7.12□□□□□ -1.27
SMC5-204ENST00000618375 SSUH2Q9Y2M2 353 aa7.12□□□□□ -1.27
SMC5-204ENST00000618375 FXR2P51116 673 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMC5-204ENST00000618375 HAX1O00165 279 aa7.05□□□□□ -1.28
SMC5-204ENST00000618375 PRR29P0C7W0 189 aa7.05□□□□□ -1.28
SMC5-204ENST00000618375 PRKAR2AP13861 404 aaKnown RBP7.04□□□□□ -1.28
SMC5-204ENST00000618375 SPDYE4A6NLX3 237 aa7.03□□□□□ -1.28
SMC5-204ENST00000618375 CHADLQ6NUI6 762 aa6.97□□□□□ -1.29
SMC5-204ENST00000618375 SP7Q8TDD2 431 aaPredicted RBP6.96□□□□□ -1.3
SMC5-204ENST00000618375 STAG3Q9UJ98 1225 aa6.95□□□□□ -1.3
SMC5-204ENST00000618375 FARP1Q9Y4F1 1045 aaPredicted RBP6.86□□□□□ -1.31
SMC5-204ENST00000618375 EVX2Q03828 476 aa6.85□□□□□ -1.31
SMC5-204ENST00000618375 C19orf67A6NJJ6 358 aa6.84□□□□□ -1.31
SMC5-204ENST00000618375 CD44P16070 742 aaKnown RBP6.83□□□□□ -1.32
SMC5-204ENST00000618375 CREBZFQ9NS37 354 aa6.81□□□□□ -1.32
SMC5-204ENST00000618375 PLEKHG5O94827 1062 aa6.79□□□□□ -1.32
SMC5-204ENST00000618375 FKBP8Q14318 412 aa6.79□□□□□ -1.32
SMC5-204ENST00000618375 PAK3O75914 559 aaPredicted RBP6.78□□□□□ -1.32
SMC5-204ENST00000618375 NPM1P06748 294 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMC5-204ENST00000618375 GABBR2O75899 941 aa6.75□□□□□ -1.33
SMC5-204ENST00000618375 PROM2Q8N271 834 aa6.75□□□□□ -1.33
SMC5-204ENST00000618375 ZRANB1Q9UGI0 708 aa6.75□□□□□ -1.33
SMC5-204ENST00000618375 MIER1Q8N108 512 aa6.74□□□□□ -1.33
SMC5-204ENST00000618375 PLCD3Q8N3E9 789 aa6.71□□□□□ -1.34
SMC5-204ENST00000618375 CLCN6P51797 869 aa6.69□□□□□ -1.34
SMC5-204ENST00000618375 ZNF579Q8NAF0 562 aaKnown RBP6.67□□□□□ -1.34
SMC5-204ENST00000618375 DCBLD2Q96PD2 775 aa6.67□□□□□ -1.34
SMC5-204ENST00000618375 MNX1P50219 401 aaPredicted RBP6.66□□□□□ -1.34
SMC5-204ENST00000618375 TSPYL2Q9H2G4 693 aaPredicted RBP6.66□□□□□ -1.34
SMC5-204ENST00000618375 ZBTB47Q9UFB7 747 aaPredicted RBP6.64□□□□□ -1.35
SMC5-204ENST00000618375 FBXO3Q9UK99 471 aa6.64□□□□□ -1.35
SMC5-204ENST00000618375 PHF12Q96QT6 1004 aa6.63□□□□□ -1.35
SMC5-204ENST00000618375 GALR2O43603 387 aaPredicted RBP6.6□□□□□ -1.35
SMC5-204ENST00000618375 KLHL34Q8N239 644 aa6.56□□□□□ -1.36
SMC5-204ENST00000618375 POTEIP0CG38 1075 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms