RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 NUP62CLQ9H1M0 184 aa9.04□□□□□ -0.96
TARDBP-219ENST00000617757 CUEDC2Q9H467 287 aa9.04□□□□□ -0.96
TARDBP-219ENST00000617757 MLXIPQ9HAP2 919 aa9.04□□□□□ -0.96
TARDBP-219ENST00000617757 TUFT1Q9NNX1 390 aa9.04□□□□□ -0.96
TARDBP-219ENST00000617757 BLOC1S4Q9NUP1 217 aa9.04□□□□□ -0.96
TARDBP-219ENST00000617757 NRBP1Q9UHY1 535 aa9.04□□□□□ -0.96
TARDBP-219ENST00000617757 KIAA1024Q9UPX6 916 aa9.04□□□□□ -0.96
TARDBP-219ENST00000617757 SAMM50Q9Y512 469 aa9.04□□□□□ -0.96
TARDBP-219ENST00000617757 PCDHA10Q9Y5I2 948 aa9.04□□□□□ -0.96
TARDBP-219ENST00000617757 A0A087WWV3 80 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 IGKV6D-21A0A0A0MT36 114 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 POTEFA5A3E0 1075 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 E9PMD0 336 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 NKRFO15226 690 aaKnown RBP eCLIP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 FOXN1O15353 648 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 PSAPP07602 524 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 SUPT20HL2P0C7V6 817 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 CYBAP13498 195 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 ELNP15502 786 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 PTGS1P23219 599 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 QARSP47897 775 aaKnown RBP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 PSMC6P62333 389 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 SP4Q02446 784 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 TNFAIP2Q03169 654 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 CACNB2Q08289 660 aaPredicted RBP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 TRIM32Q13049 653 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 LAMC2Q13753 1193 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 HSDL1Q3SXM5 330 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 GJC2Q5T442 439 aaPredicted RBP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 MFSD14CQ5VZR4 134 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 KANK3Q6NY19 840 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 POTEGQ6S5H5 508 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 RBM43Q6ZSC3 357 aaKnown RBP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 KCNK18Q7Z418 384 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 SH3RF1Q7Z6J0 888 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 CCDC60Q8IWA6 550 aaPredicted RBP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 CEP57L1Q8IYX8 460 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 KCTD17Q8N5Z5 321 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 RAET1EQ8TD07 263 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 RAD54LQ92698 747 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 STAMQ92783 540 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 EMID1Q96A84 441 aaPredicted RBP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 PAGE5Q96GU1 130 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 GPR20Q99678 358 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 LXNQ9BS40 222 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 TNMDQ9H2S6 317 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 KBTBD4Q9NVX7 518 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 WRAP73Q9P2S5 460 aaPredicted RBP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 GABBR1Q9UBS5 961 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 GNEQ9Y223 722 aaKnown RBP9.03□□□□□ -0.96
TARDBP-219ENST00000617757 KAT6AQ92794 2004 aa9.03□□□□□ -0.96
TARDBP-219ENST00000617757 CTAGE5O15320 804 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 LETM1O95202 739 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-219ENST00000617757 LYPLA2O95372 231 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 HMGCRP04035 888 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 PRR29P0C7W0 189 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 TCF7P36402 384 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-219ENST00000617757 AFMP43652 599 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 PSMC5P62195 406 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 MCM6Q14566 821 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 UGCGQ16739 394 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 SWSAP1Q6NVH7 229 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 MIS18BP1Q6P0N0 1132 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 SV2BQ7L1I2 683 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 C4orf19Q8IY42 314 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 GRAMD1CQ8IYS0 662 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 OR6J1Q8NGC5 347 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 LARP4BQ92615 738 aaKnown RBP9.02□□□□□ -0.97
TARDBP-219ENST00000617757 CCDC34Q96HJ3 373 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 SPATA33Q96N06 139 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 NACC1Q96RE7 527 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 PCYT2Q99447 389 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 MTRQ99707 1265 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 ZSWIM4Q9H7M6 989 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 MAGEF1Q9HAY2 307 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 ZNF302Q9NR11 478 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 HOOK1Q9UJC3 728 aaKnown RBP9.02□□□□□ -0.97
TARDBP-219ENST00000617757 FAM184BQ9ULE4 1060 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 DNM3Q9UQ16 869 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 TRIM17Q9Y577 477 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 IGSF9BQ9UPX0 1349 aa9.02□□□□□ -0.97
TARDBP-219ENST00000617757 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 BACH1O14867 736 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 ZBTB39O15060 712 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 DYNC1LI2O43237 492 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 ZNF862O60290 1169 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 DKC1O60832 514 aaKnown RBP eCLIP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 LGR5O75473 907 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 STBD1O95210 358 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 EYA4O95677 639 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 PLA2G4BP0C869 781 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 XRCC6P12956 609 aaKnown RBP eCLIP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 AKR1A1P14550 325 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 ATP4AP20648 1035 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms