RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 OCM2P0CE71 109 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 OCMP0CE72 109 aaPredicted RBP9.96□□□□□ -0.81
COL12A1-211ENST00000615798 KRT20P35900 424 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 PRPF18Q99633 342 aaKnown RBP9.96□□□□□ -0.81
COL12A1-211ENST00000615798 DSEQ9UL01 958 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 ATP10DQ9P241 1426 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 GNL1P36915 607 aaPredicted RBP9.96□□□□□ -0.82
COL12A1-211ENST00000615798 NLRP12P59046 1061 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 RAPGEF1Q13905 1077 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 COPRSQ9NQ92 184 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 KRT84Q9NSB2 600 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.82
COL12A1-211ENST00000615798 TUBB1Q9H4B7 451 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 AP4S1Q9Y587 144 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 A0A1W2PRG6 482 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 ATF2P15336 505 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 SLC52A2Q9HAB3 445 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 DENND2AQ9ULE3 1009 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 NRXN1Q9ULB1 1477 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 CYP4A11Q02928 519 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 CYP4A22Q5TCH4 519 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 THOC7Q6I9Y2 204 aaKnown RBP9.96□□□□□ -0.82
COL12A1-211ENST00000615798 TRIM69Q86WT6 500 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 AMFRQ9UKV5 643 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 CARD8Q9Y2G2 431 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 BAIAP3O94812 1187 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 TUBA3EQ6PEY2 450 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 PPP4R3CPQ6ZMV5 832 aa9.96□□□□□ -0.82
COL12A1-211ENST00000615798 TDRD7Q8NHU6 1098 aaKnown RBP9.96□□□□□ -0.82
COL12A1-211ENST00000615798 ABCC12Q96J65 1359 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 IKBKBO14920 756 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 MAML1Q92585 1016 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 USP44Q9H0E7 712 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 SPATA2Q9UM82 520 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 ERVV-2B6SEH9 535 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 TOMM70O94826 608 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 USHBP1Q8N6Y0 703 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 DHX36Q9H2U1 1008 aaKnown RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 E7ENQ6 273 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 ANGPT2O15123 496 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 PTCD1O75127 700 aaKnown RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 EIF4A1P60842 406 aaKnown RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 GCKRQ14397 625 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 NDUFA13Q9P0J0 144 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 PUM3Q15397 648 aaKnown RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 TAF8Q7Z7C8 310 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 STAG2Q8N3U4 1231 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 DTX3LQ8TDB6 740 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 ASPSCR1Q9BZE9 553 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 TRIM33Q9UPN9 1127 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 ARMCX4Q5H9R4 360 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 ZNF555Q8NEP9 628 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 ANKRD27Q96NW4 1050 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 SPRTNQ9H040 489 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 LSG1Q9H089 658 aaKnown RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 ECT2Q9H8V3 914 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 IPO5O00410 1097 aaKnown RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 COPB2P35606 906 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 PDE6BP35913 854 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 ARPC4P59998 168 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 PLS1Q14651 629 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 PARVGQ9HBI0 331 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 KCNH3Q9ULD8 1083 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 SYT2Q8N9I0 419 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 ALDH8A1Q9H2A2 487 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 VIPAS39Q9H9C1 493 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 IQANK1A0A1B0GTG1 560 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 NFIBO00712 420 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 CIAO1O76071 339 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 BTN3A2P78410 334 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 MTX1Q13505 466 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 LONRF2Q1L5Z9 754 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 CNNM4Q6P4Q7 775 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 SH3KBP1Q96B97 665 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 IFNA8P32881 189 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 TERF2Q15554 542 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 TSHZ3Q63HK5 1081 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 HEATR4Q86WZ0 1026 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 SMYD3Q9H7B4 428 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 RGL1Q9NZL6 768 aa9.95□□□□□ -0.82
COL12A1-211ENST00000615798 RPAP1Q9BWH6 1393 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-211ENST00000615798 TMEM247A6NEH6 219 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 MAP4K1Q92918 833 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 CAAP1Q9H8G2 361 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 POLR3EQ9NVU0 708 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 EPHB4P54760 987 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 CRLF3Q8IUI8 442 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 CRACR2BQ8N4Y2 399 aaPredicted RBP9.94□□□□□ -0.82
COL12A1-211ENST00000615798 DDI1Q8WTU0 396 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 ZBTB18Q99592 522 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 INHBAP08476 426 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 TMEM63CQ9P1W3 806 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 WDR19Q8NEZ3 1342 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 SMCO3A2RU48 225 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 PRR23AA6NEV1 266 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 DNAJC5BQ9UF47 199 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 TAGAPQ8N103 731 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 MSL3Q8N5Y2 521 aaKnown RBP9.94□□□□□ -0.82
COL12A1-211ENST00000615798 MTRQ99707 1265 aa9.94□□□□□ -0.82
COL12A1-211ENST00000615798 FHDC1Q9C0D6 1143 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms