RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 TRIM50Q86XT4 487 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 GPKOWQ92917 476 aaPredicted RBP eCLIP11.98□□□□□ -0.49
SSX3-204ENST00000612497 TTC14Q96N46 770 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 HINFPQ9BQA5 517 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 PDCD2LQ9BRP1 358 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 BCAS3Q9H6U6 928 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 ZNF215Q9UL58 517 aaPredicted RBP11.98□□□□□ -0.49
SSX3-204ENST00000612497 SPTBN2O15020 2390 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 FOXP2O15409 715 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 ASGR2P07307 311 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 FGRP09769 529 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 IBSPP21815 317 aaPredicted RBP11.97□□□□□ -0.49
SSX3-204ENST00000612497 ERVFC1P60507 584 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 QRICH1Q2TAL8 776 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 FBXO47Q5MNV8 452 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 UTP14CQ5TAP6 766 aaKnown RBP11.97□□□□□ -0.49
SSX3-204ENST00000612497 PDE12Q6L8Q7 609 aaKnown RBP11.97□□□□□ -0.49
SSX3-204ENST00000612497 TAF2Q6P1X5 1199 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 RUFY4Q6ZNE9 571 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 TSHZ1Q6ZSZ6 1077 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 RTN4RL1Q86UN2 441 aaPredicted RBP11.97□□□□□ -0.49
SSX3-204ENST00000612497 VSIG10LQ86VR7 867 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 ADGRF4Q8IZF3 695 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 LINC01599Q8WXQ3 324 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 SEMA4AQ9H3S1 761 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 VAT1LQ9HCJ6 419 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 AAASQ9NRG9 546 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 CDH22Q9UJ99 828 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 LRFN2Q9ULH4 789 aa11.97□□□□□ -0.49
SSX3-204ENST00000612497 NRCAMQ92823 1304 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 PI15O43692 258 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 FGF18O76093 207 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 HOXB8P17481 243 aaPredicted RBP11.96□□□□□ -0.49
SSX3-204ENST00000612497 CD52P31358 61 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 HSD17B4P51659 736 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 MGAT3Q09327 533 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 PGM5Q15124 567 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 PLPP4Q5VZY2 271 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 CWF19L1Q69YN2 538 aaKnown RBP11.96□□□□□ -0.49
SSX3-204ENST00000612497 CES5AQ6NT32 575 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 CCDC105Q8IYK2 499 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 THNSL1Q8IYQ7 743 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 CRIPAKQ8N1N5 446 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 DTWD2Q8NBA8 298 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 IL31RAQ8NI17 732 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 NECTIN4Q96NY8 510 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 FTHL17Q9BXU8 183 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 POMKQ9H5K3 350 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 AGO3Q9H9G7 860 aaKnown RBP11.96□□□□□ -0.49
SSX3-204ENST00000612497 TMEM260Q9NX78 707 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 CDY2AQ9Y6F7 541 aa11.96□□□□□ -0.49
SSX3-204ENST00000612497 CFAP47Q6ZTR5 3102 aa11.96□□□□□ -0.5
SSX3-204ENST00000612497 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
SSX3-204ENST00000612497 SCG2P13521 617 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 AOC1P19801 751 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 CCND2P30279 289 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 HOXA13P31271 388 aaPredicted RBP11.95□□□□□ -0.5
SSX3-204ENST00000612497 APOBRQ0VD83 1088 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 KCNC3Q14003 757 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 VPS53Q5VIR6 699 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 STOX1Q6ZVD7 989 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 CYFIP1Q7L576 1253 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 DNAJB3Q8WWF6 145 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 GPR20Q99678 358 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 LIMD1Q9UGP4 676 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 DDX19BQ9UMR2 479 aa11.95□□□□□ -0.5
SSX3-204ENST00000612497 MAP1BP46821 2468 aaKnown RBP11.94□□□□□ -0.5
SSX3-204ENST00000612497 FSCN2O14926 492 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 MS4A1P11836 297 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 MRPS6P82932 125 aaKnown RBP11.94□□□□□ -0.5
SSX3-204ENST00000612497 SP4Q02446 784 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 NEDD9Q14511 834 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 METTL7BQ6UX53 244 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 TDRD5Q8NAT2 981 aaKnown RBP11.94□□□□□ -0.5
SSX3-204ENST00000612497 CYP2W1Q8TAV3 490 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 RASGRP4Q8TDF6 673 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 RTP3Q9BQQ7 232 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 ZKSCAN3Q9BRR0 538 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 ADAM7Q9H2U9 754 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 ENTPD7Q9NQZ7 604 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 DLL3Q9NYJ7 618 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 R4GN57 208 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 OTOGLQ3ZCN5 2332 aa11.94□□□□□ -0.5
SSX3-204ENST00000612497 BAHCC1Q9P281 2608 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 TBKBP1A7MCY6 615 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 OPLAHO14841 1288 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 ARP10275 920 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 ITIH3Q06033 890 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 PPFIA1Q13136 1202 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 RSPO4Q2I0M5 234 aaPredicted RBP11.93□□□□□ -0.5
SSX3-204ENST00000612497 GNPTABQ3T906 1256 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 FCHSD1Q86WN1 690 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 ZDHHC14Q8IZN3 488 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 MIER1Q8N108 512 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 CASP10Q92851 521 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 TCF25Q9BQ70 676 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 AMNQ9BXJ7 453 aa11.93□□□□□ -0.5
SSX3-204ENST00000612497 JMJD4Q9H9V9 463 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms