RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 GBP4Q96PP9 640 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 PCYT2Q99447 389 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 EIF2AK1Q9BQI3 630 aaKnown RBP8.63□□□□□ -1.03
MSH6-211ENST00000606499 SPC25Q9HBM1 224 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 RGL1Q9NZL6 768 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 WRAP73Q9P2S5 460 aaPredicted RBP8.63□□□□□ -1.03
MSH6-211ENST00000606499 GABBR1Q9UBS5 961 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 PCDHA10Q9Y5I2 948 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 A0A087X0B3 334 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 TMEM150BA6NC51 233 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 ZNF862O60290 1169 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 LGR5O75473 907 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 CAPN15O75808 1086 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 F2P00734 622 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 ASGR1P07306 291 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 GJB1P08034 283 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 SPATA31C1P0DKV0 1188 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 MARK3P27448 753 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 CST5P28325 142 aaPredicted RBP8.62□□□□□ -1.03
MSH6-211ENST00000606499 CCT6AP40227 531 aaKnown RBP8.62□□□□□ -1.03
MSH6-211ENST00000606499 CHMP4BP1P59074 171 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 NKX3-2P78367 333 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 PURAQ00577 322 aaKnown RBP8.62□□□□□ -1.03
MSH6-211ENST00000606499 PRKCEQ02156 737 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 CTTNQ14247 550 aaKnown RBP8.62□□□□□ -1.03
MSH6-211ENST00000606499 KARSQ15046 597 aaKnown RBP8.62□□□□□ -1.03
MSH6-211ENST00000606499 EPHA7Q15375 998 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 ZRSR1Q15695 479 aaKnown RBP8.62□□□□□ -1.03
MSH6-211ENST00000606499 KCNA10Q16322 511 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 ECM1Q16610 540 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 DGKDQ16760 1214 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 RESP18Q5W5W9 173 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 KRT79Q5XKE5 535 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 CCSAPQ6IQ19 270 aaPredicted RBP8.62□□□□□ -1.03
MSH6-211ENST00000606499 PDXDC2PQ6P474 469 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 CXCL17Q6UXB2 119 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 RNF180Q86T96 592 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 CATSPER3Q86XQ3 398 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 TMEM87AQ8NBN3 555 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 KLHDC9Q8NEP7 349 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 RDM1Q8NG50 284 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 ERMNQ8TAM6 284 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 U2AF1L4Q8WU68 220 aaKnown RBP8.62□□□□□ -1.03
MSH6-211ENST00000606499 GLG1Q92896 1179 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 AK8Q96MA6 479 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 PLIN2Q99541 437 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 LXNQ9BS40 222 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 C16orf70Q9BSU1 422 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 CRISPLD2Q9H0B8 497 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 GOLPH3LQ9H4A5 285 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 ZNF302Q9NR11 478 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 OGDHLQ9ULD0 1010 aa8.62□□□□□ -1.03
MSH6-211ENST00000606499 SCN10AQ9Y5Y9 1956 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 A0A087WWV3 80 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 A0A1B0GVL5 298 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 KBTBD13C9JR72 458 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 ZBTB39O15060 712 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 PPFIA4O75335 1185 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 PRPF40AO75400 957 aaKnown RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 SLITRK3O94933 977 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 SGPL1O95470 568 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 TFRCP02786 760 aaKnown RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 P4HBP07237 508 aaKnown RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 PFKFB1P16118 471 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 PLCG1P19174 1290 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 ATP4AP20648 1035 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 RPA1P27694 616 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 UBA7P41226 1012 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 QARSP47897 775 aaKnown RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 GJA8P48165 433 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 STAT5BP51692 787 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 ACLYP53396 1101 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 GRB10Q13322 594 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 BRDTQ58F21 947 aaPredicted RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 FAM160B1Q5W0V3 765 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 HAUS3Q68CZ6 603 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 ADALQ6DHV7 355 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 TRMT1LQ7Z2T5 733 aaKnown RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 KCNK18Q7Z418 384 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 TPH2Q8IWU9 490 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 PDILTQ8N807 584 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 FSIP1Q8NA03 581 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 ZNF579Q8NAF0 562 aaKnown RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 RASSF8Q8NHQ8 419 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 NEK9Q8TD19 979 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 AFAP1L1Q8TED9 768 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 LRRC15Q8TF66 581 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 MRPS27Q92552 414 aaKnown RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 KAT2BQ92831 832 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 ATP6V0A1Q93050 837 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 PNMA5Q96PV4 448 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 HSD17B14Q9BPX1 270 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 POLR3CQ9BUI4 534 aaPredicted RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 PANK2Q9BZ23 570 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 AZI2Q9H6S1 392 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 TUFT1Q9NNX1 390 aa8.61□□□□□ -1.03
MSH6-211ENST00000606499 DDX19AQ9NUU7 478 aaKnown RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 MAFBQ9Y5Q3 323 aaPredicted RBP8.61□□□□□ -1.03
MSH6-211ENST00000606499 KDM3AQ9Y4C1 1321 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms