RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 NONOQ15233 471 aaKnown RBP eCLIP9.98□□□□□ -0.811e-6■■■■□ 25.2
SSBP4-208ENST00000600628 FAM26DQ5JW98 314 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 PSRC1Q6PGN9 363 aaPredicted RBP9.98□□□□□ -0.81
SSBP4-208ENST00000600628 ZNF365Q70YC5 407 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 KRT25Q7Z3Z0 450 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 CCDC60Q8IWA6 550 aaPredicted RBP9.98□□□□□ -0.81
SSBP4-208ENST00000600628 DEFB123Q8N688 67 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 C7orf31Q8N865 590 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 LMBR1Q8WVP7 490 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 WASF1Q92558 559 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 RNPC3Q96LT9 517 aaKnown RBP9.98□□□□□ -0.81
SSBP4-208ENST00000600628 ALG1Q9BT22 464 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 ERAP1Q9NZ08 941 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 MAFBQ9Y5Q3 323 aaPredicted RBP9.98□□□□□ -0.81
SSBP4-208ENST00000600628 NRCAMQ92823 1304 aa9.98□□□□□ -0.81
SSBP4-208ENST00000600628 MYO9BQ13459 2157 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 TREHO43280 583 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 NBNO60934 754 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 ACRP10323 421 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 SELPP16109 830 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 SPIRE1Q08AE8 756 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 NR5A1Q13285 461 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 PLCB4Q15147 1175 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 PRR16Q569H4 304 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 KRT40Q6A162 431 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 SMAP1Q8IYB5 467 aaPredicted RBP9.97□□□□□ -0.81
SSBP4-208ENST00000600628 RPUSD2Q8IZ73 545 aaKnown RBP9.97□□□□□ -0.81
SSBP4-208ENST00000600628 FBXO18Q8NFZ0 1043 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 HAS1Q92839 578 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 SCLYQ96I15 445 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 CEP89Q96ST8 783 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 SDF4Q9BRK5 362 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 SETD4Q9NVD3 440 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 CXXC1Q9P0U4 656 aaPredicted RBP9.97□□□□□ -0.81
SSBP4-208ENST00000600628 ZNF215Q9UL58 517 aaPredicted RBP9.97□□□□□ -0.81
SSBP4-208ENST00000600628 NOD1Q9Y239 953 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 IGSF9BQ9UPX0 1349 aa9.97□□□□□ -0.81
SSBP4-208ENST00000600628 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.96□□□□□ -0.82
SSBP4-208ENST00000600628 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.96□□□□□ -0.82
SSBP4-208ENST00000600628 C17orf102A2RUQ5 167 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 FAM205CA6NFA0 338 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 WNT7AO00755 349 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 TBX3O15119 743 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 SLC37A4O43826 429 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 ZNF862O60290 1169 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 STBD1O95210 358 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 TDP2O95551 362 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 FGBP02675 491 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 GCFC2P16383 781 aaKnown RBP9.96□□□□□ -0.82
SSBP4-208ENST00000600628 XBP1P17861 261 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 ZNF76P36508 570 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 STAT5BP51692 787 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 HMGN5P82970 282 aaKnown RBP9.96□□□□□ -0.82
SSBP4-208ENST00000600628 KRT76Q01546 638 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 INF2Q27J81 1249 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 TCTN1Q2MV58 587 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 ZNF618Q5T7W0 954 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 Q7L0L9 218 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 CCDC155Q8N6L0 562 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 LINC01465Q8N7H1 131 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 RETREG2Q8NC44 543 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 RDM1Q8NG50 284 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 ATP8B4Q8TF62 1192 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 ATP6V0A1Q93050 837 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 ZNF577Q9BSK1 485 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 OSBPL7Q9BZF2 842 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 MTMR10Q9NXD2 777 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 PKD2L1Q9P0L9 805 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 VAV3Q9UKW4 847 aa9.96□□□□□ -0.82
SSBP4-208ENST00000600628 TTC3P53804 2025 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 MUC3AQ02505 3323 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 TMEM265A0A087WTH1 108 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 RRN3P2A6NIE6 340 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 BTBD18B2RXH4 712 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 GNAT1P11488 350 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 INSRRP14616 1297 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 U2AF2P26368 475 aaKnown RBP eCLIP9.95□□□□□ -0.82
SSBP4-208ENST00000600628 SP4Q02446 784 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 MGAT3Q09327 533 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 PPP2R5CQ13362 524 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 GRIK4Q16099 956 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 UTP14CQ5TAP6 766 aaKnown RBP9.95□□□□□ -0.82
SSBP4-208ENST00000600628 TAF2Q6P1X5 1199 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 RUFY4Q6ZNE9 571 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 LRRC8DQ7L1W4 858 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 NEK8Q86SG6 692 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 CCDC83Q8IWF9 413 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 GJA10Q969M2 543 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 TMX3Q96JJ7 454 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 FAM20AQ96MK3 541 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 MTMR9Q96QG7 549 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 PCDHA10Q9Y5I2 948 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 GTF3C3Q9Y5Q9 886 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 COL1A2P08123 1366 aa9.95□□□□□ -0.82
SSBP4-208ENST00000600628 ARID2Q68CP9 1835 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 COL4A6Q14031 1691 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 KDM3AQ9Y4C1 1321 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 POTEB3A0JP26 581 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 WDR64B1ANS9 1081 aa9.94□□□□□ -0.82
SSBP4-208ENST00000600628 HBP1O60381 514 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms