RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 RSPH10B2B2RC85 870 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 LARGE1O95461 756 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 RSPH10BP0C881 870 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 FDPSP14324 419 aaKnown RBP14.82□□□□□ -0.04
USE1-207ENST00000596136 THPOP40225 353 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 PBX2P40425 430 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 STAT5BP51692 787 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 PPFIA1Q13136 1202 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 RAB30Q15771 203 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 PRR16Q569H4 304 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 ZNF746Q6NUN9 644 aaPredicted RBP14.82□□□□□ -0.04
USE1-207ENST00000596136 CNKSR3Q6P9H4 555 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 MOXD1Q6UVY6 613 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 TBCKQ8TEA7 893 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 TNPO1Q92973 898 aaKnown RBP14.82□□□□□ -0.04
USE1-207ENST00000596136 MBOAT7Q96N66 472 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 KIF2CQ99661 725 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 ZNF577Q9BSK1 485 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 AZI2Q9H6S1 392 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 CHD7Q9P2D1 2997 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 PCDHA11Q9Y5I1 949 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 GBF1Q92538 1859 aa14.82□□□□□ -0.04
USE1-207ENST00000596136 ZBBXA8MT70 800 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 INSRRP14616 1297 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 ATP2A2P16615 1042 aaKnown RBP14.81□□□□□ -0.04
USE1-207ENST00000596136 MARK3P27448 753 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
USE1-207ENST00000596136 PLCB4Q15147 1175 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 GRIK4Q16099 956 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 TCTN1Q2MV58 587 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 Q4G0T1 1027 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 TAF2Q6P1X5 1199 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 NECAB1Q8N987 351 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 WASF1Q92558 559 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 FAM161BQ96MY7 647 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 SLC9A7Q96T83 725 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 CDX2Q99626 313 aaPredicted RBP14.81□□□□□ -0.04
USE1-207ENST00000596136 ZNF576Q9H609 170 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 ORC3Q9UBD5 711 aaPredicted RBP14.81□□□□□ -0.04
USE1-207ENST00000596136 MSRAQ9UJ68 235 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 KCNJ14Q9UNX9 436 aa14.81□□□□□ -0.04
USE1-207ENST00000596136 MYH9P35579 1960 aaKnown RBP14.8□□□□□ -0.04
USE1-207ENST00000596136 ABHD14A-ACY1A0A1B0GW23 586 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 MSH4O15457 936 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 EFCAB14O75071 495 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 RPLP2P05387 115 aaKnown RBP14.8□□□□□ -0.04
USE1-207ENST00000596136 XBP1P17861 261 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 RBM25P49756 843 aaKnown RBP14.8□□□□□ -0.04
USE1-207ENST00000596136 KRT76Q01546 638 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 PLEKHG4Q58EX7 1191 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 KRT25Q7Z3Z0 450 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 CCDC60Q8IWA6 550 aaPredicted RBP14.8□□□□□ -0.04
USE1-207ENST00000596136 SMAP1Q8IYB5 467 aaPredicted RBP14.8□□□□□ -0.04
USE1-207ENST00000596136 NSUN7Q8NE18 718 aaKnown RBP14.8□□□□□ -0.04
USE1-207ENST00000596136 RIT2Q99578 217 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 TUBE1Q9UJT0 475 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 YBX2Q9Y2T7 364 aaKnown RBP14.8□□□□□ -0.04
USE1-207ENST00000596136 MAFBQ9Y5Q3 323 aaPredicted RBP14.8□□□□□ -0.04
USE1-207ENST00000596136 WDR81Q562E7 1941 aa14.8□□□□□ -0.04
USE1-207ENST00000596136 POTEB3A0JP26 581 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 ATP4AP20648 1035 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 WDR5P61964 334 aaKnown RBP14.79□□□□□ -0.04
USE1-207ENST00000596136 ST3GAL1Q11201 340 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 PTPRSQ13332 1948 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 IKBKEQ14164 716 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 GRIN2CQ14957 1233 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.04
USE1-207ENST00000596136 FAM160B1Q5W0V3 765 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 MIS18BP1Q6P0N0 1132 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 POTEBQ6S5H4 581 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 RUFY4Q6ZNE9 571 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 ATP8B4Q8TF62 1192 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 SLC5A5Q92911 643 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 LIMCH1Q9UPQ0 1083 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 PCDHA10Q9Y5I2 948 aa14.79□□□□□ -0.04
USE1-207ENST00000596136 DDX39AO00148 427 aaKnown RBP14.78□□□□□ -0.04
USE1-207ENST00000596136 HBP1O60381 514 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 PSMD10O75832 226 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 CHRNA1P02708 482 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 RABGGTBP53611 331 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 MGAT3Q09327 533 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 SWSAP1Q6NVH7 229 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 B3GNT9Q6UX72 402 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 HERC6Q8IVU3 1022 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 DBF4BQ8NFT6 615 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 OSBPL7Q9BZF2 842 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 ZNF302Q9NR11 478 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 GJB4Q9NTQ9 266 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 PCDHA2Q9Y5H9 948 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 MICAL3Q7RTP6 2002 aa14.78□□□□□ -0.04
USE1-207ENST00000596136 COL1A2P08123 1366 aa14.77□□□□□ -0.04
USE1-207ENST00000596136 BACH1O14867 736 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 DTNBO60941 627 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 TDP2O95551 362 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 PSAPP07602 524 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 KCNJ6P48051 423 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 PPP4R3AQ6IN85 833 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 PDXDC2PQ6P474 469 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 RSPH3Q86UC2 560 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 ETNPPLQ8TBG4 499 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms