RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 TGFB3P10600 412 aa11.36□□□□□ -0.59
RETREG3-211ENST00000591547 TICAM2Q86XR7 235 aa11.36□□□□□ -0.59
RETREG3-211ENST00000591547 SUGP1Q8IWZ8 645 aaKnown RBP11.36□□□□□ -0.59
RETREG3-211ENST00000591547 FBXL6Q8N531 539 aa11.36□□□□□ -0.59
RETREG3-211ENST00000591547 KLHL23Q8NBE8 558 aa11.36□□□□□ -0.59
RETREG3-211ENST00000591547 POF1BQ8WVV4 589 aa11.36□□□□□ -0.59
RETREG3-211ENST00000591547 DNAJB3Q8WWF6 145 aa11.36□□□□□ -0.59
RETREG3-211ENST00000591547 MTMR8Q96EF0 704 aa11.36□□□□□ -0.59
RETREG3-211ENST00000591547 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
RETREG3-211ENST00000591547 USP15Q9Y4E8 981 aaPredicted RBP11.36□□□□□ -0.59
RETREG3-211ENST00000591547 SPATA31C2B4DYI2 1134 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 H0Y858 1186 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 GNAT1P11488 350 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 PCP11498 1178 aaKnown RBP11.35□□□□□ -0.59
RETREG3-211ENST00000591547 SP100P23497 879 aaPredicted RBP11.35□□□□□ -0.59
RETREG3-211ENST00000591547 MARK3P27448 753 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 CD52P31358 61 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 TMEM62Q0P6H9 643 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 FBXO47Q5MNV8 452 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 METTL7BQ6UX53 244 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 CYB5R4Q7L1T6 521 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 EFHBQ8N7U6 833 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 SMRP1Q8NCR6 262 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 VN1R2Q8NFZ6 395 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 ATOH1Q92858 354 aaPredicted RBP11.35□□□□□ -0.59
RETREG3-211ENST00000591547 ASIC4Q96FT7 647 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 APOL5Q9BWW9 433 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 USP26Q9BXU7 913 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 TLR9Q9NR96 1032 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 HCSTQ9UBK5 93 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 CDY2AQ9Y6F7 541 aa11.35□□□□□ -0.59
RETREG3-211ENST00000591547 ZFHX2Q9C0A1 2572 aaPredicted RBP11.35□□□□□ -0.59
RETREG3-211ENST00000591547 PALM3A6NDB9 673 aaPredicted RBP11.34□□□□□ -0.59
RETREG3-211ENST00000591547 CYTH3O43739 400 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 ATP9AO75110 1047 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 CDC45O75419 566 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 AVPR2P30518 371 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 ICAM3P32942 547 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 IGBP1P78318 339 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 COASYQ13057 564 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 CBX2Q14781 532 aaPredicted RBP11.34□□□□□ -0.59
RETREG3-211ENST00000591547 SEC23AQ15436 765 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 MARCH8Q5T0T0 291 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 IFIT1BQ5T764 474 aaKnown RBP11.34□□□□□ -0.59
RETREG3-211ENST00000591547 CWC27Q6UX04 472 aaKnown RBP11.34□□□□□ -0.59
RETREG3-211ENST00000591547 CRIPAKQ8N1N5 446 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 INPP4AQ96PE3 977 aaPredicted RBP11.34□□□□□ -0.59
RETREG3-211ENST00000591547 FAM49AQ9H0Q0 323 aaPredicted RBP11.34□□□□□ -0.59
RETREG3-211ENST00000591547 IL25Q9H293 177 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 PKD2L1Q9P0L9 805 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 CDH22Q9UJ99 828 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 RWDD3Q9Y3V2 267 aa11.34□□□□□ -0.59
RETREG3-211ENST00000591547 GSTTP1A0A1W2PQM5 241 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 CHMLP26374 656 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 TCF7P36402 384 aaPredicted RBP11.33□□□□□ -0.6
RETREG3-211ENST00000591547 SIGLEC14Q08ET2 396 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 PPFIA1Q13136 1202 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 NEDD9Q14511 834 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 GRIK4Q16099 956 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 CCDC178Q5BJE1 867 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 ASCL5Q7RTU5 278 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 PLVAPQ9BX97 442 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 MAP3K20Q9NYL2 800 aaKnown RBP11.33□□□□□ -0.6
RETREG3-211ENST00000591547 ZNF215Q9UL58 517 aaPredicted RBP11.33□□□□□ -0.6
RETREG3-211ENST00000591547 NRCAMQ92823 1304 aa11.33□□□□□ -0.6
RETREG3-211ENST00000591547 FNDC1Q4ZHG4 1894 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-211ENST00000591547 FIBPO43427 364 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 ERVFC1P60507 584 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 MRPS6P82932 125 aaKnown RBP11.32□□□□□ -0.6
RETREG3-211ENST00000591547 APOBRQ0VD83 1088 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 TMEM266Q2M3C6 531 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 GNPTABQ3T906 1256 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 USP17L6PQ6QN14 398 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 TSHZ1Q6ZSZ6 1077 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 CMTR2Q8IYT2 770 aaKnown RBP11.32□□□□□ -0.6
RETREG3-211ENST00000591547 MICAL1Q8TDZ2 1067 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 TRAPPC12Q8WVT3 735 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 P2RX5Q93086 422 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 UBAC1Q9BSL1 405 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 PHF7Q9BWX1 381 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-211ENST00000591547 SMOC2Q9H3U7 446 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 TLE6Q9H808 572 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 TUBE1Q9UJT0 475 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 ZDBF2Q9HCK1 2354 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 FRMPD4Q14CM0 1322 aa11.32□□□□□ -0.6
RETREG3-211ENST00000591547 ARP10275 920 aa11.31□□□□□ -0.6
RETREG3-211ENST00000591547 GRM4Q14833 912 aa11.31□□□□□ -0.6
RETREG3-211ENST00000591547 LLGL2Q6P1M3 1020 aa11.31□□□□□ -0.6
RETREG3-211ENST00000591547 RUFY2Q8WXA3 655 aa11.31□□□□□ -0.6
RETREG3-211ENST00000591547 TMX1Q9H3N1 280 aa11.31□□□□□ -0.6
RETREG3-211ENST00000591547 PADI3Q9ULW8 664 aa11.31□□□□□ -0.6
RETREG3-211ENST00000591547 VPS13AQ96RL7 3174 aa11.3□□□□□ -0.6
RETREG3-211ENST00000591547 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
RETREG3-211ENST00000591547 SGSM2O43147 1006 aa11.3□□□□□ -0.6
RETREG3-211ENST00000591547 MGEA5O60502 916 aa11.3□□□□□ -0.6
RETREG3-211ENST00000591547 KCNA2P16389 499 aa11.3□□□□□ -0.6
RETREG3-211ENST00000591547 MFAP1P55081 439 aaKnown RBP11.3□□□□□ -0.6
RETREG3-211ENST00000591547 PTPN21Q16825 1174 aa11.3□□□□□ -0.6
RETREG3-211ENST00000591547 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms