RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 FBXO18Q8NFZ0 1043 aa23.08■■□□□ 1.29
LDLRAD4-212ENST00000587905 LMBR1Q8WVP7 490 aa23.08■■□□□ 1.29
LDLRAD4-212ENST00000587905 MBOAT7Q96N66 472 aa23.08■■□□□ 1.29
LDLRAD4-212ENST00000587905 RIT2Q99578 217 aa23.08■■□□□ 1.29
LDLRAD4-212ENST00000587905 NAP1L4Q99733 375 aaKnown RBP23.08■■□□□ 1.29
LDLRAD4-212ENST00000587905 ZNF302Q9NR11 478 aa23.08■■□□□ 1.29
LDLRAD4-212ENST00000587905 SCN5AQ14524 2016 aa23.08■■□□□ 1.28
LDLRAD4-212ENST00000587905 PITPNM1O00562 1244 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 MARCH6O60337 910 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 GNAT1P11488 350 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 ATP2B1P20020 1258 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 PPP4R3AQ6IN85 833 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 PLPPR4Q7Z2D5 763 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 TRMT1LQ7Z2T5 733 aaKnown RBP23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 DEFB128Q7Z7B8 93 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 SMAP1Q8IYB5 467 aaPredicted RBP23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 CAGE1Q8TC20 777 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 WNT8BQ93098 351 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 UNC45AQ9H3U1 944 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 KIF3AQ9Y496 699 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 NRCAMQ92823 1304 aa23.07■■□□□ 1.28
LDLRAD4-212ENST00000587905 RANBP2P49792 3224 aaKnown RBP23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 PSAPP07602 524 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 GJB2P29033 226 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 PLCB4Q15147 1175 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 GRIK4Q16099 956 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 PDXDC2PQ6P474 469 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 SERINC5Q86VE9 423 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 POTEDQ86YR6 584 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 CKAP2LQ8IYA6 745 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 ETNPPLQ8TBG4 499 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.06■■□□□ 1.282e-7■■■■□ 20.1
LDLRAD4-212ENST00000587905 IL23AQ9NPF7 189 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 DISC1Q9NRI5 854 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 SMC3Q9UQE7 1217 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 PCDHA10Q9Y5I2 948 aa23.06■■□□□ 1.28
LDLRAD4-212ENST00000587905 MYH9P35579 1960 aaKnown RBP23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 IGKV6D-21A0A0A0MT36 114 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 WDR64B1ANS9 1081 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 PSMD10O75832 226 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 SLC34A2O95436 690 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 IQCF3P0C7M6 154 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 CKBP12277 381 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 INSRRP14616 1297 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 HOXC8P31273 242 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 THPOP40225 353 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 AFAP1L1Q8TED9 768 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 RNPC3Q96LT9 517 aaKnown RBP23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 GABBR1Q9UBS5 961 aa23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.05■■□□□ 1.28
LDLRAD4-212ENST00000587905 POTEB3A0JP26 581 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 SELPP16109 830 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 POTEBQ6S5H4 581 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 ZNF365Q70YC5 407 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 LRRC8DQ7L1W4 858 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 C16orf59Q7L2K0 433 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 MIER3Q7Z3K6 550 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 TRAPPC12Q8WVT3 735 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 FOXP1Q9H334 677 aaPredicted RBP23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 TUBE1Q9UJT0 475 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 WDR81Q562E7 1941 aa23.04■■□□□ 1.28
LDLRAD4-212ENST00000587905 WNT7AO00755 349 aa23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 SLC26A2P50443 739 aa23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 JAK3P52333 1124 aa23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 TRIM71Q2Q1W2 868 aaKnown RBP23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 TMEM240Q5SV17 173 aa23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 ZNF618Q5T7W0 954 aa23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 PSRC1Q6PGN9 363 aaPredicted RBP23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 RPUSD2Q8IZ73 545 aaKnown RBP23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 TNPO1Q92973 898 aaKnown RBP23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 ZBTB10Q96DT7 871 aa23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 KCNMB3Q9NPA1 279 aa23.03■■□□□ 1.28
LDLRAD4-212ENST00000587905 KIF28PB7ZC32 967 aa23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 RBAK-RBAKDNI3L0D1 243 aa23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 SOX1O00570 391 aaPredicted RBP23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 CTSHP09668 335 aa23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 SFNP31947 248 aa23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 FXR1P51114 621 aaKnown RBP eCLIP23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 ADAM17P78536 824 aa23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 MCTP1Q6DN14 999 aa23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 RUFY4Q6ZNE9 571 aa23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 ATP8B4Q8TF62 1192 aa23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 FAM20AQ96MK3 541 aa23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 FTOQ9C0B1 505 aaKnown RBP eCLIP23.02■■□□□ 1.28
LDLRAD4-212ENST00000587905 RRN3P2A6NIE6 340 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 H3BQV1 296 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 NEMFO60524 1076 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 BAG4O95429 457 aaKnown RBP23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 FGBP02675 491 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 MCM7P33993 719 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 RBL2Q08999 1139 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 CALCRLQ16602 461 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 OTOP2Q7RTS6 562 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 NOSTRINQ8IVI9 506 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 HAS1Q92839 578 aa23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 MAFBQ9Y5Q3 323 aaPredicted RBP23.01■■□□□ 1.27
LDLRAD4-212ENST00000587905 TBX3O15119 743 aa23■■□□□ 1.27
LDLRAD4-212ENST00000587905 HBP1O60381 514 aa23■■□□□ 1.27
LDLRAD4-212ENST00000587905 ATP4AP20648 1035 aa23■■□□□ 1.27
LDLRAD4-212ENST00000587905 RFC2P35250 354 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms