RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 ZNF888P0CJ79 500 aaPredicted RBP7.47□□□□□ -1.21
VNN3-214ENST00000580813 HMGA2P52926 109 aa7.47□□□□□ -1.21
VNN3-214ENST00000580813 R3HDM1Q15032 1099 aaKnown RBP7.47□□□□□ -1.21
VNN3-214ENST00000580813 TCTN3Q6NUS6 607 aa7.47□□□□□ -1.21
VNN3-214ENST00000580813 USP51Q70EK9 711 aa7.47□□□□□ -1.21
VNN3-214ENST00000580813 MTDHQ86UE4 582 aaKnown RBP7.47□□□□□ -1.21
VNN3-214ENST00000580813 SH3RF2Q8TEC5 729 aa7.47□□□□□ -1.21
VNN3-214ENST00000580813 RIC8BQ9NVN3 520 aa7.47□□□□□ -1.21
VNN3-214ENST00000580813 TCRBV5S4A2TA0A5A2 114 aa7.46□□□□□ -1.22
VNN3-214ENST00000580813 ESYT3A0FGR9 886 aa7.46□□□□□ -1.22
VNN3-214ENST00000580813 DBPQ10586 325 aaPredicted RBP7.46□□□□□ -1.22
VNN3-214ENST00000580813 EP400NLQ6ZTU2 488 aa7.46□□□□□ -1.22
VNN3-214ENST00000580813 TAX1BP1Q86VP1 789 aa7.46□□□□□ -1.22
VNN3-214ENST00000580813 SPATA9Q9BWV2 254 aa7.46□□□□□ -1.22
VNN3-214ENST00000580813 CARD11Q9BXL7 1154 aa7.46□□□□□ -1.22
VNN3-214ENST00000580813 ARHGAP28Q9P2N2 729 aa7.46□□□□□ -1.22
VNN3-214ENST00000580813 ZFR2Q9UPR6 939 aaKnown RBP7.46□□□□□ -1.22
VNN3-214ENST00000580813 CCDC9Q9Y3X0 531 aaKnown RBP7.46□□□□□ -1.22
VNN3-214ENST00000580813 SUV39H1O43463 412 aa7.45□□□□□ -1.22
VNN3-214ENST00000580813 PAK1Q13153 545 aa7.45□□□□□ -1.22
VNN3-214ENST00000580813 DPP8Q6V1X1 898 aaPredicted RBP7.45□□□□□ -1.22
VNN3-214ENST00000580813 ARHGAP36Q6ZRI8 547 aa7.45□□□□□ -1.22
VNN3-214ENST00000580813 SPATC1Q76KD6 591 aa7.45□□□□□ -1.22
VNN3-214ENST00000580813 NLGN4XQ8N0W4 816 aa7.45□□□□□ -1.22
VNN3-214ENST00000580813 NEIL1Q96FI4 390 aaPredicted RBP7.45□□□□□ -1.22
VNN3-214ENST00000580813 CDC6Q99741 560 aa7.45□□□□□ -1.22
VNN3-214ENST00000580813 MRIQ9BWK5 157 aa7.45□□□□□ -1.22
VNN3-214ENST00000580813 CATSPERZQ9NTU4 200 aa7.45□□□□□ -1.22
VNN3-214ENST00000580813 TESMINQ9Y4I5 508 aa7.45□□□□□ -1.22
VNN3-214ENST00000580813 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.44□□□□□ -1.22
VNN3-214ENST00000580813 CYR61O00622 381 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 AQP7O14520 342 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 U2SURPO15042 1029 aaKnown RBP7.44□□□□□ -1.22
VNN3-214ENST00000580813 SLPIP03973 132 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 PTPN1P18031 435 aaKnown RBP7.44□□□□□ -1.22
VNN3-214ENST00000580813 POLD1P28340 1107 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 ACVRL1P37023 503 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 RRADP55042 308 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 RAC3P60763 192 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 PRKD1Q15139 912 aaPredicted RBP7.44□□□□□ -1.22
VNN3-214ENST00000580813 GPR19Q15760 415 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 IPO9Q96P70 1041 aaKnown RBP7.44□□□□□ -1.22
VNN3-214ENST00000580813 ADOQ96SZ5 270 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 SRPK3Q9UPE1 567 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 HS3ST3A1Q9Y663 406 aa7.44□□□□□ -1.22
VNN3-214ENST00000580813 FAM90A27PA6NNH2 459 aa7.43□□□□□ -1.22
VNN3-214ENST00000580813 STK10O94804 968 aaKnown RBP7.43□□□□□ -1.22
VNN3-214ENST00000580813 KRT15P19012 456 aa7.43□□□□□ -1.22
VNN3-214ENST00000580813 SCUBE1Q8IWY4 988 aa7.43□□□□□ -1.22
VNN3-214ENST00000580813 CKAP2LQ8IYA6 745 aa7.43□□□□□ -1.22
VNN3-214ENST00000580813 PTPRN2Q92932 1015 aa7.43□□□□□ -1.22
VNN3-214ENST00000580813 FBXW5Q969U6 566 aa7.43□□□□□ -1.22
VNN3-214ENST00000580813 ZNF669Q96BR6 464 aaPredicted RBP7.43□□□□□ -1.22
VNN3-214ENST00000580813 ZNF341Q9BYN7 854 aa7.43□□□□□ -1.22
VNN3-214ENST00000580813 PPP1R1BQ9UD71 204 aaPredicted RBP7.43□□□□□ -1.22
VNN3-214ENST00000580813 PFDN2Q9UHV9 154 aa7.43□□□□□ -1.22
VNN3-214ENST00000580813 PCDHA8Q9Y5H6 950 aa7.43□□□□□ -1.22
VNN3-214ENST00000580813 CCDC85CA6NKD9 419 aa7.42□□□□□ -1.22
VNN3-214ENST00000580813 CUTAO60888 179 aa7.42□□□□□ -1.22
VNN3-214ENST00000580813 PYGMP11217 842 aa7.42□□□□□ -1.22
VNN3-214ENST00000580813 ST5P78524 1137 aa7.42□□□□□ -1.22
VNN3-214ENST00000580813 TOP3AQ13472 1001 aaPredicted RBP7.42□□□□□ -1.22
VNN3-214ENST00000580813 WDR72Q3MJ13 1102 aa7.42□□□□□ -1.22
VNN3-214ENST00000580813 MAMDC2Q7Z304 686 aaPredicted RBP7.42□□□□□ -1.22
VNN3-214ENST00000580813 OSTM1Q86WC4 334 aa7.42□□□□□ -1.22
VNN3-214ENST00000580813 PTRH1Q86Y79 214 aaKnown RBP7.42□□□□□ -1.22
VNN3-214ENST00000580813 ATP23Q9Y6H3 246 aa7.42□□□□□ -1.22
VNN3-214ENST00000580813 TRBV23-1A0A0A0MS06 115 aa7.41□□□□□ -1.22
VNN3-214ENST00000580813 PDPK1O15530 556 aa7.41□□□□□ -1.22
VNN3-214ENST00000580813 SRGAP2CP0DJJ0 459 aa7.41□□□□□ -1.22
VNN3-214ENST00000580813 PDE6AP16499 860 aa7.41□□□□□ -1.22
VNN3-214ENST00000580813 GUCY1A3Q02108 690 aa7.41□□□□□ -1.22
VNN3-214ENST00000580813 NOLC1Q14978 699 aaKnown RBP eCLIP7.41□□□□□ -1.22
VNN3-214ENST00000580813 RNF151Q2KHN1 245 aa7.41□□□□□ -1.22
VNN3-214ENST00000580813 MTERF2Q49AM1 385 aa7.41□□□□□ -1.22
VNN3-214ENST00000580813 FAM209AQ5JX71 171 aa7.41□□□□□ -1.22
VNN3-214ENST00000580813 FUKQ8N0W3 1084 aa7.41□□□□□ -1.22
VNN3-214ENST00000580813 MAN2B1O00754 1011 aa7.4□□□□□ -1.22
VNN3-214ENST00000580813 COMTP21964 271 aa7.4□□□□□ -1.22
VNN3-214ENST00000580813 RBM25P49756 843 aaKnown RBP7.4□□□□□ -1.22
VNN3-214ENST00000580813 SUMO1P63165 101 aaKnown RBP7.4□□□□□ -1.22
VNN3-214ENST00000580813 SSRP1Q08945 709 aaKnown RBP7.4□□□□□ -1.22
VNN3-214ENST00000580813 ZMAT1Q5H9K5 638 aa7.4□□□□□ -1.22
VNN3-214ENST00000580813 PCDH19Q8TAB3 1148 aa7.4□□□□□ -1.22
VNN3-214ENST00000580813 NR2E1Q9Y466 385 aa7.4□□□□□ -1.22
VNN3-214ENST00000580813 PRAMEF25A6NGN4 478 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 KCNK3O14649 394 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 ADCY3O60266 1144 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 CDC14BO60729 498 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 AMY2AP04746 511 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 AMY2BP19961 511 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 CR2P20023 1033 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 PTGS1P23219 599 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 ADCY8P40145 1251 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 JAM2P57087 298 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 CRY1Q16526 586 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 NRN1LQ496H8 165 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 FOXB2Q5VYV0 432 aa7.39□□□□□ -1.23
VNN3-214ENST00000580813 DPYSL5Q9BPU6 564 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms