RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 AEBP2Q6ZN18 517 aaPredicted RBP33.07■■■□□ 2.88
VNN3-214ENST00000580813 CHIC1Q5VXU3 224 aa31.67■■■□□ 2.66
VNN3-214ENST00000580813 SENP3Q9H4L4 574 aaPredicted RBP28.19■■■□□ 2.1
VNN3-214ENST00000580813 PHF23Q9BUL5 403 aaPredicted RBP27.88■■■□□ 2.05
VNN3-214ENST00000580813 FOXD1Q16676 465 aa26.24■■□□□ 1.79
VNN3-214ENST00000580813 PLPPR3Q6T4P5 718 aa25.45■■□□□ 1.66
VNN3-214ENST00000580813 PPP6R1Q9UPN7 881 aa24.74■■□□□ 1.55
VNN3-214ENST00000580813 ADRA2BP18089 450 aa24.71■■□□□ 1.55
VNN3-214ENST00000580813 PIAS4Q8N2W9 510 aaPredicted RBP24.63■■□□□ 1.53
VNN3-214ENST00000580813 MSH5O43196 834 aa24.46■■□□□ 1.51
VNN3-214ENST00000580813 POTEDQ86YR6 584 aa23.42■■□□□ 1.34
VNN3-214ENST00000580813 MAPK8IP2Q13387 824 aaPredicted RBP22.62■■□□□ 1.21
VNN3-214ENST00000580813 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
VNN3-214ENST00000580813 DMRT2Q9Y5R5 561 aa22.38■■□□□ 1.17
VNN3-214ENST00000580813 PPP4R3CPQ6ZMV5 832 aa22.35■■□□□ 1.17
VNN3-214ENST00000580813 CNKSR2Q8WXI2 1034 aa21.86■■□□□ 1.09
VNN3-214ENST00000580813 HOXD11P31277 338 aaPredicted RBP21.64■■□□□ 1.05
VNN3-214ENST00000580813 NCBP3Q53F19 620 aaKnown RBP21.59■■□□□ 1.05
VNN3-214ENST00000580813 DCAF8L1A6NGE4 600 aa21.57■■□□□ 1.04
VNN3-214ENST00000580813 RNF216Q9NWF9 866 aaPredicted RBP21.57■■□□□ 1.04
VNN3-214ENST00000580813 NPM3O75607 178 aaKnown RBP21.25■□□□□ 0.99
VNN3-214ENST00000580813 KCNA4P22459 653 aa21.09■□□□□ 0.97
VNN3-214ENST00000580813 CACNB1Q02641 598 aaPredicted RBP20.88■□□□□ 0.93
VNN3-214ENST00000580813 RNF39Q9H2S5 420 aa20.88■□□□□ 0.93
VNN3-214ENST00000580813 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
VNN3-214ENST00000580813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.72■□□□□ 0.91
VNN3-214ENST00000580813 C1QBPQ07021 282 aaKnown RBP20.6■□□□□ 0.89
VNN3-214ENST00000580813 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
VNN3-214ENST00000580813 SLC4A2P04920 1241 aa20.21■□□□□ 0.83
VNN3-214ENST00000580813 SLC4A1APQ9BWU0 796 aaKnown RBP19.99■□□□□ 0.79
VNN3-214ENST00000580813 SPINK5Q9NQ38 1064 aaPredicted RBP19.91■□□□□ 0.78
VNN3-214ENST00000580813 CAPN15O75808 1086 aa19.9■□□□□ 0.78
VNN3-214ENST00000580813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
VNN3-214ENST00000580813 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
VNN3-214ENST00000580813 APLP2Q06481 763 aa19.74■□□□□ 0.75
VNN3-214ENST00000580813 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
VNN3-214ENST00000580813 DSG3P32926 999 aa19.66■□□□□ 0.74
VNN3-214ENST00000580813 MYCNP04198 464 aaPredicted RBP19.65■□□□□ 0.74
VNN3-214ENST00000580813 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
VNN3-214ENST00000580813 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
VNN3-214ENST00000580813 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
VNN3-214ENST00000580813 ABCB7O75027 752 aa19.46■□□□□ 0.71
VNN3-214ENST00000580813 ZBTB22O15209 634 aa19.37■□□□□ 0.69
VNN3-214ENST00000580813 ATF5Q9Y2D1 282 aaPredicted RBP19.18■□□□□ 0.66
VNN3-214ENST00000580813 POLA2Q14181 598 aa19.16■□□□□ 0.66
VNN3-214ENST00000580813 ATXN8OSP0DMR3 200 aa18.93■□□□□ 0.62
VNN3-214ENST00000580813 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
VNN3-214ENST00000580813 ZBTB12Q9Y330 459 aaPredicted RBP18.76■□□□□ 0.59
VNN3-214ENST00000580813 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
VNN3-214ENST00000580813 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
VNN3-214ENST00000580813 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
VNN3-214ENST00000580813 FBLN2P98095 1184 aa18.45■□□□□ 0.54
VNN3-214ENST00000580813 POTEHQ6S545 545 aa18.43■□□□□ 0.54
VNN3-214ENST00000580813 AKT1S1Q96B36 256 aa18.38■□□□□ 0.53
VNN3-214ENST00000580813 MKRN4PQ13434 485 aaPredicted RBP18.29■□□□□ 0.52
VNN3-214ENST00000580813 CHRDL2Q6WN34 429 aa18.25■□□□□ 0.51
VNN3-214ENST00000580813 REM2Q8IYK8 340 aaPredicted RBP18.22■□□□□ 0.51
VNN3-214ENST00000580813 SPDYE2BA6NHP3 402 aa18.2■□□□□ 0.5
VNN3-214ENST00000580813 SPDYE6P0CI01 402 aa18.2■□□□□ 0.5
VNN3-214ENST00000580813 SPDYE2Q495Y8 402 aa18.2■□□□□ 0.5
VNN3-214ENST00000580813 ZNF692Q9BU19 519 aaPredicted RBP18.07■□□□□ 0.48
VNN3-214ENST00000580813 PITPNM1O00562 1244 aa18.02■□□□□ 0.48
VNN3-214ENST00000580813 SSUH2Q9Y2M2 353 aa17.96■□□□□ 0.47
VNN3-214ENST00000580813 PIP4P2Q8N4L2 257 aa17.87■□□□□ 0.45
VNN3-214ENST00000580813 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
VNN3-214ENST00000580813 SPDYE1Q8NFV5 336 aaPredicted RBP17.83■□□□□ 0.44
VNN3-214ENST00000580813 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
VNN3-214ENST00000580813 FXR2P51116 673 aaKnown RBP eCLIP17.78■□□□□ 0.44
VNN3-214ENST00000580813 SPDYE4A6NLX3 237 aa17.61■□□□□ 0.41
VNN3-214ENST00000580813 PRKAR2AP13861 404 aaKnown RBP17.58■□□□□ 0.4
VNN3-214ENST00000580813 PRR29P0C7W0 189 aa17.57■□□□□ 0.4
VNN3-214ENST00000580813 HAX1O00165 279 aa17.53■□□□□ 0.4
VNN3-214ENST00000580813 CHADLQ6NUI6 762 aa17.46■□□□□ 0.39
VNN3-214ENST00000580813 SP7Q8TDD2 431 aaPredicted RBP17.39■□□□□ 0.37
VNN3-214ENST00000580813 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
VNN3-214ENST00000580813 EVX2Q03828 476 aa17.28■□□□□ 0.36
VNN3-214ENST00000580813 C19orf67A6NJJ6 358 aa17.2■□□□□ 0.34
VNN3-214ENST00000580813 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
VNN3-214ENST00000580813 CREBZFQ9NS37 354 aa17.14■□□□□ 0.33
VNN3-214ENST00000580813 PROM2Q8N271 834 aa17.13■□□□□ 0.33
VNN3-214ENST00000580813 CD44P16070 742 aaKnown RBP17.04■□□□□ 0.32
VNN3-214ENST00000580813 FKBP8Q14318 412 aa17.03■□□□□ 0.32
VNN3-214ENST00000580813 GABBR2O75899 941 aa16.91■□□□□ 0.3
VNN3-214ENST00000580813 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
VNN3-214ENST00000580813 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
VNN3-214ENST00000580813 MNX1P50219 401 aaPredicted RBP16.85■□□□□ 0.29
VNN3-214ENST00000580813 MIER1Q8N108 512 aa16.81■□□□□ 0.28
VNN3-214ENST00000580813 PAK3O75914 559 aaPredicted RBP16.79■□□□□ 0.28
VNN3-214ENST00000580813 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
VNN3-214ENST00000580813 ZNF579Q8NAF0 562 aaKnown RBP16.74■□□□□ 0.27
VNN3-214ENST00000580813 PLCD3Q8N3E9 789 aa16.71■□□□□ 0.27
VNN3-214ENST00000580813 CLCN6P51797 869 aa16.7■□□□□ 0.26
VNN3-214ENST00000580813 PHF12Q96QT6 1004 aa16.63■□□□□ 0.25
VNN3-214ENST00000580813 TSPYL2Q9H2G4 693 aaPredicted RBP16.62■□□□□ 0.25
VNN3-214ENST00000580813 FBXO3Q9UK99 471 aa16.58■□□□□ 0.24
VNN3-214ENST00000580813 DCBLD2Q96PD2 775 aa16.56■□□□□ 0.24
VNN3-214ENST00000580813 GALR2O43603 387 aaPredicted RBP16.55■□□□□ 0.24
VNN3-214ENST00000580813 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
VNN3-214ENST00000580813 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
VNN3-214ENST00000580813 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms