RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 CHMP2AO43633 222 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TIMP1P01033 207 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 MARK3P27448 753 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PPFIA1Q13136 1202 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 GDF6Q6KF10 455 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 CCDC60Q8IWA6 550 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 CAGE1Q8TC20 777 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TRIM43Q96BQ3 446 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 FAM167AQ96KS9 214 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PCYT2Q99447 389 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 NOC4LQ9BVI4 516 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 UNC45AQ9H3U1 944 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 HIPK3Q9H422 1215 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TRPC6Q9Y210 931 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 NRCAMQ92823 1304 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 VPS37CA5D8V6 355 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RRN3P2A6NIE6 340 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 HOXC8P31273 242 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 MCM7P33993 719 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 MAGEA10P43363 369 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PTK7Q13308 1070 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PPP2R5CQ13362 524 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RILPL1Q5EBL4 403 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 SWSAP1Q6NVH7 229 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 BRAPQ7Z569 592 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 ATP8B4Q8TF62 1192 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PPP1R13LQ8WUF5 828 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 ATP6V0A1Q93050 837 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 IGSF9BQ9UPX0 1349 aa14.32□□□□□ -0.12
CDK5RAP3-203ENST00000577442 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 HBP1O60381 514 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 DKC1O60832 514 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RPLP2P05387 115 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 OR52Z1P0C646 297 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 CYP2C9P11712 490 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PDIA4P13667 645 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PLCB4Q15147 1175 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 GRIK4Q16099 956 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 B3GNT9Q6UX72 402 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 CKAP2LQ8IYA6 745 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TMEM199Q8N511 208 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RETREG2Q8NC44 543 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 LMBR1Q8WVP7 490 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 HAS1Q92839 578 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 GJA10Q969M2 543 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 GDF15Q99988 308 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RNPEPQ9H4A4 650 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 GABBR1Q9UBS5 961 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 VAV3Q9UKW4 847 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 MAFBQ9Y5Q3 323 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 COL1A2P08123 1366 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RANBP2P49792 3224 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TANC1Q9C0D5 1861 aa14.31□□□□□ -0.12
CDK5RAP3-203ENST00000577442 MDM2Q00987 491 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 FPGSQ05932 587 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RBL2Q08999 1139 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PPIGQ13427 754 aaKnown RBP eCLIP14.3□□□□□ -0.122e-14■■■■■ 28.1
CDK5RAP3-203ENST00000577442 BECN1Q14457 450 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 ZNF174Q15697 407 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 MFSD5Q6N075 450 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TAF2Q6P1X5 1199 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 SERINC5Q86VE9 423 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 BBXQ8WY36 941 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 BADQ92934 168 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 SETD4Q9NVD3 440 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TUBE1Q9UJT0 475 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PCDHA12Q9UN75 941 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 CEP131Q9UPN4 1083 aa14.3□□□□□ -0.12
CDK5RAP3-203ENST00000577442 LAD1O00515 517 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 WNT7AO00755 349 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 CAND2O75155 1236 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PARNO95453 639 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 INSRRP14616 1297 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 SYT1P21579 422 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 CYP2C18P33260 490 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 BMP8BP34820 402 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PRKCEQ02156 737 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 EPHA7Q15375 998 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TMEM266Q2M3C6 531 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 ZNF484Q5JVG2 852 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 NCAPH2Q6IBW4 605 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RSPH3Q86UC2 560 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 NEK9Q8TD19 979 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 MTMR9Q96QG7 549 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TTC12Q9H892 705 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 NRBP2Q9NSY0 501 aa14.29□□□□□ -0.12
CDK5RAP3-203ENST00000577442 A0A1W2PPC1 479 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 MBLAC1A4D2B0 266 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TREHO43280 583 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 STX6O43752 255 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 BMP15O95972 392 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 OATP04181 439 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms