RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 GUCY1B3Q02153 619 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 PPFIA1Q13136 1202 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 NR5A1Q13285 461 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 PTK7Q13308 1070 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 HIC1Q14526 733 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 LRIT3Q3SXY7 679 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 Q4G0T1 1027 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 FAM160B1Q5W0V3 765 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 ZNF746Q6NUN9 644 aaPredicted RBP11.25□□□□□ -0.61
CDH1-206ENST00000564676 PSRC1Q6PGN9 363 aaPredicted RBP11.25□□□□□ -0.61
CDH1-206ENST00000564676 MOXD1Q6UVY6 613 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 ZNF365Q70YC5 407 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 PLPPR4Q7Z2D5 763 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 DEFB128Q7Z7B8 93 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 DIS3L2Q8IYB7 885 aaKnown RBP11.25□□□□□ -0.61
CDH1-206ENST00000564676 TNPO1Q92973 898 aaKnown RBP11.25□□□□□ -0.61
CDH1-206ENST00000564676 LENG9Q96B70 501 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 CTAGE1Q96RT6 745 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 PCYT2Q99447 389 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 TEKT3Q9BXF9 490 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 DDX25Q9UHL0 483 aaKnown RBP11.25□□□□□ -0.61
CDH1-206ENST00000564676 SAMM50Q9Y512 469 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 EMSYQ7Z589 1322 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 BTBD18B2RXH4 712 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 TREHO43280 583 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 MARCH6O60337 910 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 CCNT1O60563 726 aaKnown RBP11.24□□□□□ -0.61
CDH1-206ENST00000564676 ATG7O95352 703 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 FGBP02675 491 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 SELPP16109 830 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 THPOP40225 353 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 IGBP1P78318 339 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 TMEM240Q5SV17 173 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 LRCH2Q5VUJ6 765 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 SWSAP1Q6NVH7 229 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 PDXDC2PQ6P474 469 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 ABHD15Q6UXT9 468 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 C16orf59Q7L2K0 433 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 SMAP1Q8IYB5 467 aaPredicted RBP11.24□□□□□ -0.61
CDH1-206ENST00000564676 AFAP1L1Q8TED9 768 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 LMBR1Q8WVP7 490 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 DHX38Q92620 1227 aaKnown RBP11.24□□□□□ -0.61
CDH1-206ENST00000564676 SLC5A5Q92911 643 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 GJA10Q969M2 543 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 TMX3Q96JJ7 454 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 RIT2Q99578 217 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 NAP1L4Q99733 375 aaKnown RBP11.24□□□□□ -0.61
CDH1-206ENST00000564676 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDH1-206ENST00000564676 MTIF3Q9H2K0 278 aaKnown RBP11.24□□□□□ -0.61
CDH1-206ENST00000564676 ZNF302Q9NR11 478 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 TRPC6Q9Y210 931 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 PCDHA10Q9Y5I2 948 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 NRCAMQ92823 1304 aa11.24□□□□□ -0.61
CDH1-206ENST00000564676 MYH9P35579 1960 aaKnown RBP11.23□□□□□ -0.61
CDH1-206ENST00000564676 POTEB3A0JP26 581 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 RRN3P2A6NIE6 340 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 WDR64B1ANS9 1081 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 SOX1O00570 391 aaPredicted RBP11.23□□□□□ -0.61
CDH1-206ENST00000564676 CHMP2AO43633 222 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 CD2BP2O95400 341 aaKnown RBP11.23□□□□□ -0.61
CDH1-206ENST00000564676 PSAPP07602 524 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 CKBP12277 381 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
CDH1-206ENST00000564676 RFC2P35250 354 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 SLC26A2P50443 739 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 GRIK4Q16099 956 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 EARS2Q5JPH6 523 aaKnown RBP11.23□□□□□ -0.61
CDH1-206ENST00000564676 POTEBQ6S5H4 581 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 LRRC8DQ7L1W4 858 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 CKAP2LQ8IYA6 745 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 TNFRSF25Q93038 417 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 WNT8BQ93098 351 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 LRCH3Q96II8 777 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 MBOAT7Q96N66 472 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 FTOQ9C0B1 505 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDH1-206ENST00000564676 DISC1Q9NRI5 854 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 KIF3AQ9Y496 699 aa11.23□□□□□ -0.61
CDH1-206ENST00000564676 IGKV6D-21A0A0A0MT36 114 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 SLC37A4O43826 429 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 HBP1O60381 514 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 PARNO95453 639 aaKnown RBP11.22□□□□□ -0.61
CDH1-206ENST00000564676 PFKMP08237 780 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 ACTN1P12814 892 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 INSRRP14616 1297 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 ATP2B1P20020 1258 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 HOXC8P31273 242 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 SFNP31947 248 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 ADAM17P78536 824 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 RBL2Q08999 1139 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
CDH1-206ENST00000564676 SCN5AQ14524 2016 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 TRIM71Q2Q1W2 868 aaKnown RBP11.22□□□□□ -0.61
CDH1-206ENST00000564676 ZNF618Q5T7W0 954 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 PPP4R3AQ6IN85 833 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 TAF2Q6P1X5 1199 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 OTOP2Q7RTS6 562 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 TRMT1LQ7Z2T5 733 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms