RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 NPY5RQ15761 445 aa15.18■□□□□ 0.02
CLK3-216ENST00000564468 FAM160B1Q5W0V3 765 aa15.18■□□□□ 0.02
CLK3-216ENST00000564468 ZNF746Q6NUN9 644 aaPredicted RBP15.18■□□□□ 0.02
CLK3-216ENST00000564468 MIS18BP1Q6P0N0 1132 aa15.18■□□□□ 0.02
CLK3-216ENST00000564468 LRRC8DQ7L1W4 858 aa15.18■□□□□ 0.02
CLK3-216ENST00000564468 C16orf59Q7L2K0 433 aa15.18■□□□□ 0.02
CLK3-216ENST00000564468 SERINC5Q86VE9 423 aa15.18■□□□□ 0.02
CLK3-216ENST00000564468 HERVK_113Q902F9 699 aa15.18■□□□□ 0.02
CLK3-216ENST00000564468 CTAGE1Q96RT6 745 aa15.18■□□□□ 0.02
CLK3-216ENST00000564468 KIF2CQ99661 725 aa15.18■□□□□ 0.02
CLK3-216ENST00000564468 CYP3A7-CYP3A51PA0A087WV96 503 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 RRN3P2A6NIE6 340 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 DDX39AO00148 427 aaKnown RBP15.17■□□□□ 0.02
CLK3-216ENST00000564468 RPLP2P05387 115 aaKnown RBP15.17■□□□□ 0.02
CLK3-216ENST00000564468 FDPSP14324 419 aaKnown RBP15.17■□□□□ 0.02
CLK3-216ENST00000564468 CYP3A7P24462 503 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 KRT2P35908 639 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 ZNF200P98182 395 aaPredicted RBP15.17■□□□□ 0.02
CLK3-216ENST00000564468 Q4G0T1 1027 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 DEFB128Q7Z7B8 93 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 SMAP1Q8IYB5 467 aaPredicted RBP15.17■□□□□ 0.02
CLK3-216ENST00000564468 MYLIPQ8WY64 445 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 DHX38Q92620 1227 aaKnown RBP15.17■□□□□ 0.02
CLK3-216ENST00000564468 RIT2Q99578 217 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 FTOQ9C0B1 505 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLK3-216ENST00000564468 SETD4Q9NVD3 440 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 TELO2Q9Y4R8 837 aa15.17■□□□□ 0.02
CLK3-216ENST00000564468 BACH1O14867 736 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 DHX15O43143 795 aaKnown RBP15.16■□□□□ 0.02
CLK3-216ENST00000564468 TREHO43280 583 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 PSAPP07602 524 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 GCFC2P16383 781 aaKnown RBP15.16■□□□□ 0.02
CLK3-216ENST00000564468 MARK3P27448 753 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
CLK3-216ENST00000564468 PPFIA1Q13136 1202 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 RASIP1Q5U651 963 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 TAF2Q6P1X5 1199 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 ABHD15Q6UXT9 468 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 NEK8Q86SG6 692 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 RSPH3Q86UC2 560 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 CCDC83Q8IWF9 413 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 LMBR1Q8WVP7 490 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 LENG9Q96B70 501 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 TEKT3Q9BXF9 490 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 PCDHA10Q9Y5I2 948 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 MUC3AQ02505 3323 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 GBF1Q92538 1859 aa15.16■□□□□ 0.02
CLK3-216ENST00000564468 LOXHD1Q8IVV2 1947 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 IGKV6D-21A0A0A0MT36 114 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 WDR64B1ANS9 1081 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 MSH4O15457 936 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 JAK2O60674 1132 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 GAS7O60861 476 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 SFNP31947 248 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 THPOP40225 353 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 MCM2P49736 904 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 ADAM17P78536 824 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 HIC1Q14526 733 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
CLK3-216ENST00000564468 GRIK4Q16099 956 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 INF2Q27J81 1249 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 TRIM71Q2Q1W2 868 aaKnown RBP15.15■□□□□ 0.02
CLK3-216ENST00000564468 OTOP2Q7RTS6 562 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 PCYT2Q99447 389 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 TTYH1Q9H313 450 aaPredicted RBP15.15■□□□□ 0.02
CLK3-216ENST00000564468 ZNF302Q9NR11 478 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 TRPC6Q9Y210 931 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 SAMM50Q9Y512 469 aa15.15■□□□□ 0.02
CLK3-216ENST00000564468 POTEB3A0JP26 581 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 ZBBXA8MT70 800 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 RSPH10B2B2RC85 870 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 HBP1O60381 514 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 BAIAP3O94812 1187 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 CCNE2O96020 404 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 MMP1P03956 469 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 RSPH10BP0C881 870 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 JAK3P52333 1124 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 LETM2Q2VYF4 491 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 TJAP1Q5JTD0 557 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 ZNF618Q5T7W0 954 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 LRCH2Q5VUJ6 765 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 PPP4R3AQ6IN85 833 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 PDXDC2PQ6P474 469 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 POTEBQ6S5H4 581 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 PIK3AP1Q6ZUJ8 805 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 RPAINQ86UA6 219 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 FAM184AQ8NB25 1140 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 SLC5A5Q92911 643 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 MBOAT7Q96N66 472 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 DDX25Q9UHL0 483 aaKnown RBP15.14■□□□□ 0.01
CLK3-216ENST00000564468 TUBE1Q9UJT0 475 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 SLC4A7Q9Y6M7 1214 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 MICAL3Q7RTP6 2002 aa15.14■□□□□ 0.01
CLK3-216ENST00000564468 EDIL3O43854 480 aa15.13■□□□□ 0.01
CLK3-216ENST00000564468 EFCAB14O75071 495 aa15.13■□□□□ 0.01
CLK3-216ENST00000564468 TDP2O95551 362 aa15.13■□□□□ 0.01
CLK3-216ENST00000564468 CXCL10P02778 98 aa15.13■□□□□ 0.01
CLK3-216ENST00000564468 INSRRP14616 1297 aa15.13■□□□□ 0.01
CLK3-216ENST00000564468 PLCB4Q15147 1175 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms