RNA–Protein interactions for RNA: ENST00000561554.5

RPL4-202, Transcript of ribosomal protein L4, humanhuman

TSL 4

Gene RPL4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-202ENST00000561554 VAT1LQ9HCJ6 419 aa12.57□□□□□ -0.4
RPL4-202ENST00000561554 USP15Q9Y4E8 981 aaPredicted RBP12.57□□□□□ -0.4
RPL4-202ENST00000561554 PCDHA1Q9Y5I3 950 aa12.57□□□□□ -0.4
RPL4-202ENST00000561554 PLXNA3P51805 1871 aa12.57□□□□□ -0.4
RPL4-202ENST00000561554 MBLAC1A4D2B0 266 aaPredicted RBP12.56□□□□□ -0.4
RPL4-202ENST00000561554 TRIM6-TRIM34B2RNG4 842 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 FIBPO43427 364 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 SORBS3O60504 671 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 KDM4AO75164 1064 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 GLP2RO95838 553 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 DNAJB1P25685 340 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 PTPN21Q16825 1174 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 FBXO47Q5MNV8 452 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 ERMP1Q7Z2K6 904 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 NPAS4Q8IUM7 802 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 GIMAP8Q8ND71 665 aaPredicted RBP12.56□□□□□ -0.4
RPL4-202ENST00000561554 ATP8B4Q8TF62 1192 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 POF1BQ8WVV4 589 aa12.56□□□□□ -0.4
RPL4-202ENST00000561554 ATOH1Q92858 354 aaPredicted RBP12.56□□□□□ -0.4
RPL4-202ENST00000561554 GPKOWQ92917 476 aaPredicted RBP eCLIP12.56□□□□□ -0.4
RPL4-202ENST00000561554 MRPL42Q9Y6G3 142 aaKnown RBP12.56□□□□□ -0.4
RPL4-202ENST00000561554 KIAA1671Q9BY89 1806 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 KLRF2D3W0D1 207 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 PPP1R11O60927 126 aaPredicted RBP12.55□□□□□ -0.4
RPL4-202ENST00000561554 STAG3L1P0CL83 205 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 HOXA13P31271 388 aaPredicted RBP12.55□□□□□ -0.4
RPL4-202ENST00000561554 NRIP1P48552 1158 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 PDE1AP54750 535 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 VCPP55072 806 aaKnown RBP12.55□□□□□ -0.4
RPL4-202ENST00000561554 MRPS9P82933 396 aaKnown RBP12.55□□□□□ -0.4
RPL4-202ENST00000561554 PDE12Q6L8Q7 609 aaKnown RBP12.55□□□□□ -0.4
RPL4-202ENST00000561554 XRRA1Q6P2D8 792 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 TMEM184AQ6ZMB5 413 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 CYFIP1Q7L576 1253 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 ADGRD2Q7Z7M1 963 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 KLHL23Q8NBE8 558 aa12.55□□□□□ -0.4
RPL4-202ENST00000561554 DCHS1Q96JQ0 3298 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 VPS13AQ96RL7 3174 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
RPL4-202ENST00000561554 RBAK-RBAKDNI3L0D1 243 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 GALR2O43603 387 aaPredicted RBP12.54□□□□□ -0.4
RPL4-202ENST00000561554 SEMA3FQ13275 785 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 NMIQ13287 307 aaPredicted RBP12.54□□□□□ -0.4
RPL4-202ENST00000561554 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 RIPOR3Q96MK2 946 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 NEK1Q96PY6 1258 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 KRT23Q9C075 422 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 BCAS3Q9H6U6 928 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 TLE6Q9H808 572 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 FAM86C1Q9NVL1 165 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 ZSWIM5Q9P217 1185 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 TUBE1Q9UJT0 475 aa12.54□□□□□ -0.4
RPL4-202ENST00000561554 BARX2Q9UMQ3 279 aaPredicted RBP12.54□□□□□ -0.4
RPL4-202ENST00000561554 DOCK5Q9H7D0 1870 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 DMDP11532 3685 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 B4E1Z4 1266 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
RPL4-202ENST00000561554 SRGAP2BP0DMP2 458 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 NBL1P41271 181 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 PPFIA1Q13136 1202 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 IFIT1BQ5T764 474 aaKnown RBP12.53□□□□□ -0.4
RPL4-202ENST00000561554 IER5Q5VY09 327 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 RUFY4Q6ZNE9 571 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 FCHSD1Q86WN1 690 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 UBALD2Q8IYN6 164 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 RASGRP4Q8TDF6 673 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 LINC01599Q8WXQ3 324 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 RPGRIP1Q96KN7 1286 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 UBAC1Q9BSL1 405 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 CNNM2Q9H8M5 875 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 ERAP1Q9NZ08 941 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 MAD2L2Q9UI95 211 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 PCDHB15Q9Y5E8 787 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
RPL4-202ENST00000561554 MRPS6P82932 125 aaKnown RBP12.52□□□□□ -0.41
RPL4-202ENST00000561554 GRIK4Q16099 956 aa12.52□□□□□ -0.41
RPL4-202ENST00000561554 DUSP6Q16828 381 aa12.52□□□□□ -0.41
RPL4-202ENST00000561554 UTP14CQ5TAP6 766 aaKnown RBP12.52□□□□□ -0.41
RPL4-202ENST00000561554 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.41
RPL4-202ENST00000561554 RTN4RL1Q86UN2 441 aaPredicted RBP12.52□□□□□ -0.41
RPL4-202ENST00000561554 TNPO1Q92973 898 aaKnown RBP12.52□□□□□ -0.41
RPL4-202ENST00000561554 CDHR1Q96JP9 859 aa12.52□□□□□ -0.41
RPL4-202ENST00000561554 AGO3Q9H9G7 860 aaKnown RBP12.52□□□□□ -0.41
RPL4-202ENST00000561554 AAASQ9NRG9 546 aa12.52□□□□□ -0.41
RPL4-202ENST00000561554 PCDHB12Q9Y5F1 795 aa12.52□□□□□ -0.41
RPL4-202ENST00000561554 PLXNA4Q9HCM2 1894 aa12.52□□□□□ -0.41
RPL4-202ENST00000561554 BAZ2BQ9UIF8 2168 aaKnown RBP12.52□□□□□ -0.41
RPL4-202ENST00000561554 CACNA1AO00555 2505 aa12.51□□□□□ -0.41
RPL4-202ENST00000561554 PNMA6FA0A0J9YX94 578 aa12.51□□□□□ -0.41
RPL4-202ENST00000561554 PRR23AA6NEV1 266 aa12.51□□□□□ -0.41
RPL4-202ENST00000561554 RRN3P2A6NIE6 340 aa12.51□□□□□ -0.41
RPL4-202ENST00000561554 H0Y858 1186 aa12.51□□□□□ -0.41
RPL4-202ENST00000561554 SCG2P13521 617 aa12.51□□□□□ -0.41
RPL4-202ENST00000561554 HOXB8P17481 243 aaPredicted RBP12.51□□□□□ -0.41
RPL4-202ENST00000561554 TCF7P36402 384 aaPredicted RBP12.51□□□□□ -0.41
RPL4-202ENST00000561554 KCNC3Q14003 757 aa12.51□□□□□ -0.41
RPL4-202ENST00000561554 SEC23AQ15436 765 aa12.51□□□□□ -0.41
RPL4-202ENST00000561554 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms