RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 CHRNA1P02708 482 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 ADRB1P08588 477 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 TGFB3P10600 412 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 HSPD1P10809 573 aaKnown RBP11.29□□□□□ -0.6
SMAD3-211ENST00000559460 ERVFC1P60507 584 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 TDGQ13569 410 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 ATAT1Q5SQI0 421 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 COL26A1Q96A83 441 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 EHMT1Q9H9B1 1298 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 ERVK-5Q9HDB9 667 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 NGRNQ9NPE2 291 aaKnown RBP11.29□□□□□ -0.6
SMAD3-211ENST00000559460 PXMP2Q9NR77 195 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 SH2B1Q9NRF2 756 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-211ENST00000559460 USTQ9Y2C2 406 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
SMAD3-211ENST00000559460 NRCAMQ92823 1304 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
SMAD3-211ENST00000559460 CFBP00751 764 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 RPLP2P05387 115 aaKnown RBP11.28□□□□□ -0.6
SMAD3-211ENST00000559460 PDHBP11177 359 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 NPR3P17342 541 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 UBA1P22314 1058 aaKnown RBP11.28□□□□□ -0.6
SMAD3-211ENST00000559460 CD52P31358 61 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 TBC1D8BQ0IIM8 1120 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 BMS1Q14692 1282 aaKnown RBP11.28□□□□□ -0.6
SMAD3-211ENST00000559460 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-211ENST00000559460 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 GPATCH4Q5T3I0 446 aaKnown RBP11.28□□□□□ -0.6
SMAD3-211ENST00000559460 XRRA1Q6P2D8 792 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 KBTBD3Q8NAB2 608 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 LMBR1Q8WVP7 490 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 COL20A1Q9P218 1284 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 RALYQ9UKM9 306 aaKnown RBP11.28□□□□□ -0.6
SMAD3-211ENST00000559460 DUSP12Q9UNI6 340 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 PCDHB7Q9Y5E2 793 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 CDY2AQ9Y6F7 541 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 KIAA1217Q5T5P2 1943 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 BAHCC1Q9P281 2608 aa11.28□□□□□ -0.6
SMAD3-211ENST00000559460 TPRP12270 2363 aaKnown RBP11.27□□□□□ -0.6
SMAD3-211ENST00000559460 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 TBKBP1A7MCY6 615 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 M0R2C6 588 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 FSCN2O14926 492 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 EOMESO95936 686 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 LAG3P18627 525 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 KRT17Q04695 432 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 ZNF543Q08ER8 600 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 APOBRQ0VD83 1088 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 PAK2Q13177 524 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 KCNC3Q14003 757 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 NONOQ15233 471 aaKnown RBP eCLIP11.27□□□□□ -0.612e-6■■■□□ 19.1
SMAD3-211ENST00000559460 RRP12Q5JTH9 1297 aaKnown RBP11.27□□□□□ -0.61
SMAD3-211ENST00000559460 FBXO47Q5MNV8 452 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
SMAD3-211ENST00000559460 RARS2Q5T160 578 aaKnown RBP11.27□□□□□ -0.61
SMAD3-211ENST00000559460 UTP14CQ5TAP6 766 aaKnown RBP11.27□□□□□ -0.61
SMAD3-211ENST00000559460 KIAA1841Q6NSI8 718 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 COLGALT1Q8NBJ5 622 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 MRPS27Q92552 414 aaKnown RBP11.27□□□□□ -0.61
SMAD3-211ENST00000559460 TBC1D5Q92609 795 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 GPATCH3Q96I76 525 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 TMEM47Q9BQJ4 181 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 USP18Q9UMW8 372 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 LZTS1Q9Y250 596 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 KIAA1671Q9BY89 1806 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 MYH7BA7E2Y1 1941 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 ACACBO00763 2458 aa11.27□□□□□ -0.61
SMAD3-211ENST00000559460 PLXNA4Q9HCM2 1894 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 WEE2P0C1S8 567 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 SP9P0CG40 484 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 KCNA4P22459 653 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 MGAT3Q09327 533 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 GNPTABQ3T906 1256 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 IER5Q5VY09 327 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 CCDC149Q6ZUS6 474 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 OTOP3Q7RTS5 596 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 BORCS6Q96GS4 357 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 GPR20Q99678 358 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 DZANK1Q9NVP4 752 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 TUBE1Q9UJT0 475 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.26□□□□□ -0.617e-6■■□□□ 13
SMAD3-211ENST00000559460 HCFC2Q9Y5Z7 792 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 EP300Q09472 2414 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-211ENST00000559460 ZFHX4Q86UP3 3567 aa11.26□□□□□ -0.61
SMAD3-211ENST00000559460 SPTLC1O15269 473 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 CFHP08603 1231 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 CCND2P30279 289 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 PPM1AP35813 382 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 SARSP49591 514 aaKnown RBP11.25□□□□□ -0.61
SMAD3-211ENST00000559460 GATMP50440 423 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
SMAD3-211ENST00000559460 PPFIA1Q13136 1202 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 COL9A3Q14050 684 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-211ENST00000559460 NEDD9Q14511 834 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
SMAD3-211ENST00000559460 TRIM50Q86XT4 487 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 C1orf210Q8IVY1 113 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms