RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 NBEAQ8NFP9 2946 aa11.36□□□□□ -0.59
IGKV2D-28-202ENST00000558026 MYH7P12883 1935 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 B4DLN1 442 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 H3BRB1 525 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 PPFIA4O75335 1185 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 MRPL12P52815 198 aaKnown RBP11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 RING1Q06587 406 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 SPEM2Q0P670 501 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 PDE12Q6L8Q7 609 aaKnown RBP11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 KIAA1841Q6NSI8 718 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 NEDD1Q8NHV4 660 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 NETO1Q8TDF5 533 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 TBC1D5Q92609 795 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 SPATA33Q96N06 139 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 FOXQ1Q9C009 403 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 TUT1Q9H6E5 874 aaKnown RBP11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 AGO3Q9H9G7 860 aaKnown RBP11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 WNT16Q9UBV4 365 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 LHX6Q9UPM6 363 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 NOP58Q9Y2X3 529 aaKnown RBP11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 NAV2Q8IVL1 2488 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 UNC79Q9P2D8 2635 aa11.35□□□□□ -0.59
IGKV2D-28-202ENST00000558026 PLIN4Q96Q06 1357 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 GSG1L2A8MUP6 293 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 TSPY3P0CV98 308 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 TSPY8P0CW00 308 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 NCLP19338 710 aaKnown RBP11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 CD52P31358 61 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 RARSP54136 660 aaKnown RBP11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 ATP8B2P98198 1209 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 SYDE2Q5VT97 1194 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 MYSM1Q5VVJ2 828 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 XRRA1Q6P2D8 792 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 RUFY4Q6ZNE9 571 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 COLGALT1Q8NBJ5 622 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 MIA3Q5JRA6 1907 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 LOXHD1Q8IVV2 1947 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 PATJQ8NI35 1801 aa11.34□□□□□ -0.59
IGKV2D-28-202ENST00000558026 COL4A3Q01955 1670 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 GDF9O60383 454 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 NMT2O60551 498 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 TFAP4Q01664 338 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 CSTF1Q05048 431 aaKnown RBP11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 MGAT3Q09327 533 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 STXBP2Q15833 593 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 LPAL2Q16609 132 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 FBXO47Q5MNV8 452 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 ATAT1Q5SQI0 421 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 UNQ6494/PRO21346Q6UXR6 183 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 ATRIPQ8WXE1 791 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 EPC1Q9H2F5 836 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 BCAS3Q9H6U6 928 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 IL1RAPL2Q9NP60 686 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 GPCPD1Q9NPB8 672 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 STX8Q9UNK0 236 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 KAT6AQ92794 2004 aa11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 DSPP15924 2871 aaKnown RBP11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 FRMPD2Q68DX3 1309 aaPredicted RBP11.33□□□□□ -0.6
IGKV2D-28-202ENST00000558026 C2orf16Q68DN1 1984 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 RALGAPA1Q6GYQ0 2036 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 CLASP2O75122 1294 aaKnown RBP11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 GGPS1O95749 300 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 LGALS2P05162 132 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 EIF2AK2P19525 551 aaKnown RBP11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 ADAM17P78536 824 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 ARHGAP4P98171 946 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 SP2Q02086 613 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 USH1GQ495M9 461 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 CELF3Q5SZQ8 465 aaKnown RBP11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 TMC5Q6UXY8 1006 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 TRIM50Q86XT4 487 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 LMBR1Q8WVP7 490 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 MRPS27Q92552 414 aaKnown RBP11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 ACSF2Q96CM8 615 aaPredicted RBP11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 STRBPQ96SI9 672 aaKnown RBP11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 BCL11AQ9H165 835 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 EPB41L4AQ9HCS5 686 aaPredicted RBP11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 SPATA6Q9NWH7 488 aaPredicted RBP11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 PAG1Q9NWQ8 432 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 GMEB2Q9UKD1 530 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 PCDHGA2Q9Y5H1 932 aa11.32□□□□□ -0.6
IGKV2D-28-202ENST00000558026 SRRM3A6NNA2 597 aaPredicted RBP11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 TBKBP1A7MCY6 615 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 STAG3L1P0CL83 205 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 SCG2P13521 617 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 PBX3P40426 434 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 ZNF528Q3MIS6 628 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 PHLDB3Q6NSJ2 640 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 BTNL9Q6UXG8 535 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 TSHZ1Q6ZSZ6 1077 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 OTOP3Q7RTS5 596 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 TMC7Q7Z402 723 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 ZBTB44Q8NCP5 570 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 PJA1Q8NG27 643 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 GPR152Q8TDT2 470 aa11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 SYTL5Q8TDW5 730 aaPredicted RBP11.31□□□□□ -0.6
IGKV2D-28-202ENST00000558026 NSUN6Q8TEA1 469 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms