RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 TUT1Q9H6E5 874 aaKnown RBP12.42□□□□□ -0.42
SYNE2-221ENST00000556342 CNNM2Q9H8M5 875 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 LAMA4Q16363 1823 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 GCOM1H8Y6P7 765 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-221ENST00000556342 UPP2O95045 317 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 CTSHP09668 335 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 POLR2MP0CAP2 368 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 COL19A1Q14993 1142 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 SEC23AQ15436 765 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 SLC35G1Q2M3R5 365 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 TCEAL5Q5H9L2 206 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 PLEKHM2Q8IWE5 1019 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 TMEM192Q8IY95 271 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 PABPC5Q96DU9 382 aaKnown RBP12.41□□□□□ -0.42
SYNE2-221ENST00000556342 OSBPL7Q9BZF2 842 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 RNPEPQ9H4A4 650 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 BCAS3Q9H6U6 928 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 IL21Q9HBE4 155 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-221ENST00000556342 MAD2L2Q9UI95 211 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 COL4A6Q14031 1691 aa12.41□□□□□ -0.42
SYNE2-221ENST00000556342 MICAL3Q7RTP6 2002 aa12.4□□□□□ -0.42
SYNE2-221ENST00000556342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-221ENST00000556342 PALM3A6NDB9 673 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-221ENST00000556342 HIP1O00291 1037 aa12.4□□□□□ -0.42
SYNE2-221ENST00000556342 NOP56O00567 594 aaKnown RBP12.4□□□□□ -0.42
SYNE2-221ENST00000556342 TRAF1Q13077 416 aa12.4□□□□□ -0.42
SYNE2-221ENST00000556342 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
SYNE2-221ENST00000556342 HOMER1Q86YM7 354 aa12.4□□□□□ -0.42
SYNE2-221ENST00000556342 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
SYNE2-221ENST00000556342 PIGSQ96S52 555 aa12.4□□□□□ -0.42
SYNE2-221ENST00000556342 PHOX2BQ99453 314 aa12.4□□□□□ -0.42
SYNE2-221ENST00000556342 USP26Q9BXU7 913 aa12.4□□□□□ -0.42
SYNE2-221ENST00000556342 IFIH1Q9BYX4 1025 aaKnown RBP12.4□□□□□ -0.42
SYNE2-221ENST00000556342 NSUN3Q9H649 340 aaKnown RBP12.4□□□□□ -0.42
SYNE2-221ENST00000556342 DCXO43602 365 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 GNAT1P11488 350 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 ICAM3P32942 547 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 ZP2Q05996 745 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 NEDD9Q14511 834 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 GNPTABQ3T906 1256 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 B4GALNT3Q6L9W6 998 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 EP400NLQ6ZTU2 488 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 CYB5R4Q7L1T6 521 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 CHD1LQ86WJ1 897 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 APBB2Q92870 758 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-221ENST00000556342 UIMC1Q96RL1 719 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 GPR20Q99678 358 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 RIOX1Q9H6W3 641 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 SETD4Q9NVD3 440 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 PRKAG3Q9UGI9 489 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 FAM50BQ9Y247 325 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 MYH6P13533 1939 aa12.39□□□□□ -0.43
SYNE2-221ENST00000556342 FRMPD4Q14CM0 1322 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 SPATA31C2B4DYI2 1134 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 CYTH3O43739 400 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 STAM2O75886 525 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 ADAM17P78536 824 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 MRPS9P82933 396 aaKnown RBP12.38□□□□□ -0.43
SYNE2-221ENST00000556342 SEMA3FQ13275 785 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 GRM4Q14833 912 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 FAM26DQ5JW98 314 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 ALYREFQ86V81 257 aaKnown RBP12.38□□□□□ -0.43
SYNE2-221ENST00000556342 TRIM50Q86XT4 487 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 CLDND1Q9NY35 253 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 ZNF215Q9UL58 517 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-221ENST00000556342 MYH7BA7E2Y1 1941 aa12.38□□□□□ -0.43
SYNE2-221ENST00000556342 MYO7AQ13402 2215 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 PNMA6FA0A0J9YX94 578 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 C5orf67F2Z3F1 127 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 FIBPO43427 364 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 NCK2O43639 380 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
SYNE2-221ENST00000556342 CFHP08603 1231 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 LINC00271P0C7V0 271 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 CTNNB1P35222 781 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 ARHGAP4P98171 946 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 NUCB1Q02818 461 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 RPAINQ86UA6 219 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 ADHFE1Q8IWW8 467 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 FIBCD1Q8N539 461 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 LMBR1Q8WVP7 490 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 IL17RAQ96F46 866 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 IL25Q9H293 177 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 NRCAMQ92823 1304 aa12.37□□□□□ -0.43
SYNE2-221ENST00000556342 WDFY4Q6ZS81 3184 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 CHRNA1P02708 482 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 RB1P06400 928 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 GHRP10912 638 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 BMPR1AP36894 532 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 LTBRP36941 435 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 CTC1Q2NKJ3 1217 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
SYNE2-221ENST00000556342 C11orf84Q9BUA3 381 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms